Cow genome map
| Conread name: | Ss1.1-rnca13b_a16.5 |
| Conread position: | 609-753 |
| Cow position: | chr1:71901340-71901197 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 617-767 |
| Cow position: | chr1:5736280-5736433 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 617-771 |
| Cow position: | chr1:69449581-69449414 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 617-788 |
| Cow position: | chr1:95142738-95142916 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 618-767 |
| Cow position: | chr1:4021037-4021190 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 636-741 |
| Cow position: | chr1:86844660-86844767 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 636-749 |
| Cow position: | chr1:6715260-6715376 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 637-774 |
| Cow position: | chr1:859680-859822 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 57, 131 |
| Conread position: | 638-775 |
| Cow position: | chr1:78676274-78676137 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 638-792 |
| Cow position: | chr1:26698399-26698555 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 639-752 |
| Cow position: | chr1:84471629-84471744 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 645-761 |
| Cow position: | chr1:47159811-47159929 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 608-759 |
| Cow position: | chr10:43289930-43290084 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 140 |
| Conread position: | 617-757 |
| Cow position: | chr10:50082856-50082996 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 634-787 |
| Cow position: | chr10:15184632-15184787 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 637-765 |
| Cow position: | chr10:58526062-58525930 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 637-773 |
| Cow position: | chr10:53971253-53971120 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 591-766 |
| Cow position: | chr11:16759863-16759681 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 138 |
| Conread position: | 602-770 |
| Cow position: | chr11:40297864-40297690 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 617-773 |
| Cow position: | chr11:40592561-40592720 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 617-776 |
| Cow position: | chr11:20969061-20969222 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 637-763 |
| Cow position: | chr12:31849926-31850052 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 637-766 |
| Cow position: | chr12:9206718-9206584 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 607-767 |
| Cow position: | chr13:6122048-6122210 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 607-792 |
| Cow position: | chr13:16127742-16127551 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 610-792 |
| Cow position: | chr13:8390061-8389877 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 617-776 |
| Cow position: | chr14:48798242-48798407 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 618-760 |
| Cow position: | chr14:18571566-18571417 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 636-770 |
| Cow position: | chr14:37462288-37462424 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 636-772 |
| Cow position: | chr14:39587236-39587095 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 102 |
| Conread position: | 638-792 |
| Cow position: | chr14:6966500-6966654 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 118 |
| Conread position: | 595-787 |
| Cow position: | chr15:20911885-20911692 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 597-776 |
| Cow position: | chr15:11036648-11036837 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 617-769 |
| Cow position: | chr15:41810304-41810144 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 617-791 |
| Cow position: | chr15:6880067-6879884 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 639-779 |
| Cow position: | chr15:18217710-18217842 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 569-776 |
| Cow position: | chr16:15872033-15871826 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 617-765 |
| Cow position: | chr16:6314083-6313933 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 617-767 |
| Cow position: | chr16:14657520-14657356 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 639-748 |
| Cow position: | chr16:21733301-21733189 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 581-753 |
| Cow position: | chr17:39563062-39562885 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 618-770 |
| Cow position: | chr17:7710015-7709862 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 639-756 |
| Cow position: | chr17:6878915-6879034 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 581-773 |
| Cow position: | chr18:20047903-20047715 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 21 |
| Conread position: | 594-753 |
| Cow position: | chr18:30043945-30044110 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 607-792 |
| Cow position: | chr18:53740400-53740589 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 636-766 |
| Cow position: | chr18:5058629-5058757 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 636-788 |
| Cow position: | chr18:35602922-35603076 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 636-792 |
| Cow position: | chr18:39515739-39515582 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 112 |
| Conread position: | 1-505 |
| Cow position: | chr19:35565849-35565365 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 149 |
| Conread position: | 617-749 |
| Cow position: | chr19:21160951-21161082 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 617-767 |
| Cow position: | chr19:21859803-21859647 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 636-757 |
| Cow position: | chr19:33211003-33210880 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 636-760 |
| Cow position: | chr19:21424416-21424289 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 637-788 |
| Cow position: | chr19:43376395-43376548 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 639-767 |
| Cow position: | chr19:16802281-16802410 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 597-767 |
| Cow position: | chr2:12874248-12874068 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 602-765 |
| Cow position: | chr2:43558562-43558734 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 120 |
| Conread position: | 613-744 |
| Cow position: | chr2:14979554-14979691 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 636-771 |
| Cow position: | chr2:66930608-66930745 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 636-778 |
| Cow position: | chr2:58793418-58793564 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 636-781 |
| Cow position: | chr2:73234966-73235113 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 638-770 |
| Cow position: | chr2:77417382-77417249 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 561-769 |
| Cow position: | chr20:25977728-25977932 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 24 |
| Conread position: | 594-721 |
| Cow position: | chr20:4323344-4323477 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 609-783 |
| Cow position: | chr20:12309103-12309284 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 618-752 |
| Cow position: | chr20:10781192-10781054 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 618-776 |
| Cow position: | chr20:3303863-3303703 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 112 |
| Conread position: | 636-776 |
| Cow position: | chr20:5917169-5917030 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 637-759 |
| Cow position: | chr20:13710295-13710174 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 652-755 |
| Cow position: | chr20:31596476-31596371 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 588-737 |
| Cow position: | chr21:28506689-28506843 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 618-767 |
| Cow position: | chr22:33831813-33831657 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 618-767 |
| Cow position: | chr22:40140857-40141012 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 618-792 |
| Cow position: | chr22:15693779-15693601 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 149 |
| Conread position: | 636-779 |
| Cow position: | chr22:3947326-3947469 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 604-741 |
| Cow position: | chr23:197210-197068 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 608-792 |
| Cow position: | chr23:7159633-7159823 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 635-770 |
| Cow position: | chr24:44485872-44486009 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 639-770 |
| Cow position: | chr24:23570356-23570223 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 104 |
| Conread position: | 652-763 |
| Cow position: | chr24:19811595-19811483 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 569-754 |
| Cow position: | chr25:22915101-22915289 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 48 |
| Conread position: | 618-783 |
| Cow position: | chr25:2258510-2258337 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 587-792 |
| Cow position: | chr26:30522120-30521924 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 608-769 |
| Cow position: | chr26:1950268-1950435 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 617-764 |
| Cow position: | chr26:7709709-7709558 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 131 |
| Conread position: | 638-766 |
| Cow position: | chr26:257269-257139 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 618-759 |
| Cow position: | chr27:937556-937408 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 594-770 |
| Cow position: | chr28:4287837-4288014 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 617-767 |
| Cow position: | chr28:4894240-4894083 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 575-754 |
| Cow position: | chr29:19627222-19627041 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 594-767 |
| Cow position: | chr3:75894949-75895122 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 617-760 |
| Cow position: | chr3:10170205-10170353 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 617-766 |
| Cow position: | chr3:5729177-5729333 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 617-767 |
| Cow position: | chr3:38066272-38066115 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 618-767 |
| Cow position: | chr3:2445612-2445764 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 618-773 |
| Cow position: | chr3:20679099-20678937 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 636-757 |
| Cow position: | chr3:37854487-37854365 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 636-792 |
| Cow position: | chr3:61428447-61428290 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 136 |
| Conread position: | 637-766 |
| Cow position: | chr3:69023627-69023496 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 638-771 |
| Cow position: | chr3:76401108-76401243 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 638-792 |
| Cow position: | chr3:56451854-56452003 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 592-767 |
| Cow position: | chr4:54333118-54332941 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 617-792 |
| Cow position: | chr4:26949789-26949963 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 68 |
| Conread position: | 618-757 |
| Cow position: | chr4:55196953-55197099 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 636-792 |
| Cow position: | chr4:4288731-4288574 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 135 |
| Conread position: | 639-767 |
| Cow position: | chr4:43716415-43716544 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 125 |
| Conread position: | 1-451 |
| Cow position: | chr5:33172481-33172905 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 587-792 |
| Cow position: | chr5:43493233-43493441 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 607-764 |
| Cow position: | chr5:38903070-38902906 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 616-778 |
| Cow position: | chr5:9301184-9301348 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 618-765 |
| Cow position: | chr5:32250415-32250562 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 618-775 |
| Cow position: | chr5:41016833-41016998 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 636-757 |
| Cow position: | chr5:19215067-19214942 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 636-776 |
| Cow position: | chr5:63180790-63180642 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 637-776 |
| Cow position: | chr5:3983094-3982957 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 642-783 |
| Cow position: | chr5:39744823-39744965 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 617-759 |
| Cow position: | chr6:56591964-56592115 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 636-768 |
| Cow position: | chr6:57821667-57821538 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 613-776 |
| Cow position: | chr7:53169329-53169498 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 619-776 |
| Cow position: | chr7:9054632-9054790 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 621-767 |
| Cow position: | chr7:40279493-40279348 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 645-788 |
| Cow position: | chr7:10875489-10875629 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 46 |
| Conread position: | 645-788 |
| Cow position: | chr7:37387650-37387507 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 587-770 |
| Cow position: | chr8:5986189-5985992 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 607-767 |
| Cow position: | chr8:54808667-54808506 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 617-759 |
| Cow position: | chr8:40131016-40131166 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 637-778 |
| Cow position: | chr8:14069775-14069912 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 641-767 |
| Cow position: | chr8:36536964-36537092 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 607-770 |
| Cow position: | chr9:4781411-4781573 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 607-792 |
| Cow position: | chr9:34354735-34354927 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 616-742 |
| Cow position: | chr9:23586623-23586490 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 636-776 |
| Cow position: | chr9:3724313-3724173 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 134 |
| Conread position: | 636-776 |
| Cow position: | chr9:39447357-39447501 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 138 |
| Conread position: | 587-750 |
| Cow position: | chrX:14228253-14228086 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 6 |
| Conread position: | 608-776 |
| Cow position: | chrX:20464731-20464551 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 638-767 |
| Cow position: | chrX:15823389-15823520 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |