Cow genome map
| Conread name: | Ss1.1-rnco1922b_f18.5 |
| Conread position: | 73-601 |
| Cow position: | chr1:51714618-51715130 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 154 |
| Conread position: | 73-678 |
| Cow position: | chr1:79355641-79355031 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 521, 40 |
| Conread position: | 73-628 |
| Cow position: | chr10:25254175-25254726 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 518, 0 |
| Conread position: | 86-615 |
| Cow position: | chr10:14607831-14607307 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 73-634 |
| Cow position: | chr11:75621227-75620673 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 76-536 |
| Cow position: | chr11:51787082-51786625 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 0 |
| Conread position: | 226-430 |
| Cow position: | chr11:125133-124937 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 189, 31 |
| Conread position: | 78-163 |
| Cow position: | chr12:18190840-18190755 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 223-338 |
| Cow position: | chr12:18189967-18189852 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 338-488 |
| Cow position: | chr12:18189344-18189194 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 487-615 |
| Cow position: | chr12:18189088-18188964 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 73-253 |
| Cow position: | chr13:18292805-18292982 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 387-568 |
| Cow position: | chr13:18293323-18293499 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 77-625 |
| Cow position: | chr15:34128668-34128135 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 73-597 |
| Cow position: | chr19:40215317-40215834 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 43 |
| Conread position: | 451-574 |
| Cow position: | chr21:9996480-9996364 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 73-626 |
| Cow position: | chr22:31601917-31601368 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 515, 0 |
| Conread position: | 73-637 |
| Cow position: | chr22:11064933-11065493 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 515, 0 |
| Conread position: | 72-382 |
| Cow position: | chr23:13920632-13920937 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 73-628 |
| Cow position: | chr23:13676442-13676994 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 470, 45 |
| Conread position: | 74-629 |
| Cow position: | chr23:7549856-7550424 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 196 |
| Conread position: | 438-623 |
| Cow position: | chr23:13921513-13921698 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-615 |
| Cow position: | chr26:6850117-6849564 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 75-624 |
| Cow position: | chr26:12405619-12406160 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 22 |
| Conread position: | 75-230 |
| Cow position: | chr27:21167611-21167456 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 220-601 |
| Cow position: | chr27:21167197-21166818 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 40 |
| Conread position: | 84-369 |
| Cow position: | chr28:22287394-22287121 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 231-625 |
| Cow position: | chr28:17192658-17192272 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 86 |
| Conread position: | 384-615 |
| Cow position: | chr28:22287135-22286908 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 198-611 |
| Cow position: | chr3:76918210-76918622 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 73-406 |
| Cow position: | chr4:30943850-30943520 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 442-580 |
| Cow position: | chr4:30943521-30943385 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 73-615 |
| Cow position: | chr5:38885179-38885714 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 164 |
| Conread position: | 225-579 |
| Cow position: | chr5:67563976-67563643 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 73-360 |
| Cow position: | chr6:22888168-22888433 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 440-573 |
| Cow position: | chr6:22888432-22888564 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 243-506 |
| Cow position: | chr8:20211157-20210904 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 9 |
| Conread position: | 74-570 |
| Cow position: | chr9:34104110-34103619 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 13 |
| Conread position: | 86-631 |
| Cow position: | chrX:14263125-14262584 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 502, 0 |