Cow genome map
| Conread name: | Ss1.1-rnep34c_k18.5 |
| Conread position: | 132-309 |
| Cow position: | chr1:28498499-28498676 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 305-440 |
| Cow position: | chr1:28505229-28505364 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-137 |
| Cow position: | chr10:14753600-14753733 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-138 |
| Cow position: | chr10:13724896-13725030 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-309 |
| Cow position: | chr10:13725268-13725438 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-309 |
| Cow position: | chr10:14753992-14754162 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-428 |
| Cow position: | chr10:13726584-13726704 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-428 |
| Cow position: | chr10:14754753-14754873 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-137 |
| Cow position: | chr13:46561020-46560884 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-309 |
| Cow position: | chr13:46560700-46560530 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-456 |
| Cow position: | chr13:46559403-46559252 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 144-358 |
| Cow position: | chr15:35608937-35609151 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 144, 151 |
| Conread position: | 142-318 |
| Cow position: | chr18:49131140-49131316 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-138 |
| Cow position: | chr19:2430244-2430107 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 130 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-138 |
| Cow position: | chr19:2457576-2457439 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-138 |
| Cow position: | chr19:22387928-22387791 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 133 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-138 |
| Cow position: | chr19:22426278-22426141 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-138 |
| Cow position: | chr19:22490271-22490134 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-137 |
| Cow position: | chr19:2573775-2573645 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-309 |
| Cow position: | chr19:2429011-2428836 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-309 |
| Cow position: | chr19:2455812-2455637 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-309 |
| Cow position: | chr19:22386545-22386370 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-309 |
| Cow position: | chr19:22426022-22425852 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-309 |
| Cow position: | chr19:22488780-22488610 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-456 |
| Cow position: | chr19:2428065-2427917 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 136 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-456 |
| Cow position: | chr19:2455513-2455365 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 128 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-456 |
| Cow position: | chr19:22385594-22385446 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-456 |
| Cow position: | chr19:22423927-22423779 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 133 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-456 |
| Cow position: | chr19:22487745-22487597 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 131 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-358 |
| Cow position: | chr2:3712056-3711842 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 142, 151 |
| Conread position: | 151-307 |
| Cow position: | chr2:77894536-77894380 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-309 |
| Cow position: | chr25:34968114-34967944 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 131-311 |
| Cow position: | chr5:45674832-45675012 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 159, 152 |