Cow genome map
| Conread name: | Ss1.1-rnmm36c_e11.5 | 
| Conread position: | 365-881 | 
| Cow position: | chr13:10100052-10100553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 61 | 
| Conread position: | 1381-1932 | 
| Cow position: | chr13:10100533-10101082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 21 | 
| Conread position: | 464-657 | 
| Cow position: | chr15:49681044-49681240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 31, 85 | 
| Conread position: | 1748-1936 | 
| Cow position: | chr15:49681235-49681419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 181, 44 | 
| Conread position: | 1-948 | 
| Cow position: | chr16:16802943-16803854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 953 | 
| Alignm identity: | 777 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 404, 87 | 
| Conread position: | 1533-2242 | 
| Cow position: | chr16:16804231-16804933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 711 | 
| Alignm identity: | 630 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 552, 154 | 
| Conread position: | 493-727 | 
| Cow position: | chr3:26684944-26684714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 145 | 
| Conread position: | 720-1226 | 
| Cow position: | chr3:26681098-26680596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 53 | 
| Conread position: | 1264-1933 | 
| Cow position: | chr3:26680266-26679630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 529 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 113 | 
| Conread position: | 886-1721 | 
| Cow position: | chr7:26646561-26645737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 839 | 
| Alignm identity: | 728 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 376, 50 | 
| Conread position: | 1543-1932 | 
| Cow position: | chr7:26645585-26645198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 867-1326 | 
| Cow position: | chr9:23661909-23661446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 430 | 
| Conread position: | 1383-1935 | 
| Cow position: | chr9:23661448-23660902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 10 | 
| Conread position: | 1579-1934 | 
| Cow position: | chr9:7869479-7869827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 202, 23 | 
| Conread position: | 1660-1760 | 
| Cow position: | chr9:13207509-13207409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1750-1931 | 
| Cow position: | chr9:13207220-13207040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 118, 0 | 
