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Cow genome map

           
Conread name:
           
Ss1.1-rpfco0101_h20.5.5
        

               
Conread position:
               
4-240
               

               
Cow position:
               
chr10:9010352-9010116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr10:8996372-8996086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr10:8996708-8996422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr10:8996288-8995999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr10:8996540-8996240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr10:8996785-8996506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr10:8996616-8996341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr10:8996448-8996170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-248
               

               
Cow position:
               
chr10:9010091-9009856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
13-283
               

               
Cow position:
               
chr10:9031394-9031664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-289
               

               
Cow position:
               
chr10:9010511-9010235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 75
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr10:8996867-8996590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr10:9031310-9031587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-300
               

               
Cow position:
               
chr10:9031228-9031515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
140, 133
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chr10:21939003-21938724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-303
               

               
Cow position:
               
chr10:9010573-9010303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
247, 0
               

               
Conread position:
               
79-290
               

               
Cow position:
               
chr10:8996885-8996674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr11:74554883-74554585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
243, 250
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr11:74554547-74554246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
12-208
               

               
Cow position:
               
chr11:74554371-74554175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr11:74554623-74554345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr11:74554791-74554513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr11:74555043-74554765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-303
               

               
Cow position:
               
chr11:74554959-74554666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
270, 0
               

               
Conread position:
               
13-297
               

               
Cow position:
               
chr11:74554454-74554169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
276, 0
               

               
Conread position:
               
25-324
               

               
Cow position:
               
chr11:74554694-74554396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
264, 276
               

               
Conread position:
               
58-290
               

               
Cow position:
               
chr11:74555081-74554849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 52
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr13:24162708-24162983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 122
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr13:22125402-22125701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
258, 0
               

               
Conread position:
               
12-278
               

               
Cow position:
               
chr13:56333777-56334043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr13:56292053-56291771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
13-239
               

               
Cow position:
               
chr13:56333694-56333920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr13:39930710-39930987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr13:39930794-39931071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr13:39930878-39931153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr13:39984130-39984407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 66
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr13:39984298-39984587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr13:39984550-39984839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
13-305
               

               
Cow position:
               
chr13:39984466-39984760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
13-312
               

               
Cow position:
               
chr13:56292136-56291837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
291, 279
               

               
Conread position:
               
16-288
               

               
Cow position:
               
chr13:39930629-39930903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr13:56292877-56292610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
25-278
               

               
Cow position:
               
chr13:39984646-39984899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-290
               

               
Cow position:
               
chr13:39984236-39984491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-287
               

               
Cow position:
               
chr13:56292194-56291946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
56-288
               

               
Cow position:
               
chr13:39930585-39930819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
217, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr14:3080037-3079796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 109
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr14:3100868-3100583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr14:25794875-25794598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr14:25783819-25784106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr14:25784239-25784526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr14:25783483-25783782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr14:25783652-25783878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
156, 169
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr14:680699-680935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr14:3156122-3156360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr14:25784408-25784678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
166, 153
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr14:3156206-3156482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr14:3080118-3079835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr14:25784072-25784358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
166, 153
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr14:25795126-25794840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr14:25836103-25836402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 93
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr14:680868-681153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 105
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr14:3100610-3100337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr14:25836781-25837061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 87
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr14:25860002-25860282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
243, 238
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr14:25877053-25877333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
243, 238
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr14:25877558-25877791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
11-287
               

               
Cow position:
               
chr14:25860507-25860783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr14:3127538-3127310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr14:680371-680600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr14:3080782-3080552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-243
               

               
Cow position:
               
chr14:447569-447800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr14:3080530-3080297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr14:3080614-3080336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr14:3127706-3127428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr14:3155962-3156240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-240
               

               
Cow position:
               
chr14:25859417-25859644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-242
               

               
Cow position:
               
chr14:3079941-3079712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-242
               

               
Cow position:
               
chr14:25876804-25877033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
13-242
               

               
Cow position:
               
chr14:25877644-25877873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
13-243
               

               
Cow position:
               
chr14:25783577-25783807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-243
               

               
Cow position:
               
chr14:25795033-25794803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-243
               

               
Cow position:
               
chr14:25836616-25836846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-243
               

               
Cow position:
               
chr14:25895935-25896165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr14:25794697-25794440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-278
               

               
Cow position:
               
chr14:25783409-25783674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:680960-681237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:3101354-3101078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:3127621-3127344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:3128041-3127764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:25784333-25784610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:25836448-25836725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:25859585-25859862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
241, 249
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:25860341-25860618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:25876636-25876913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:25877392-25877669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr14:25894846-25895120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25783997-25784286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25795201-25794912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25836868-25837157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
262, 0
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25859333-25859622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
263, 0
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25860173-25860462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25860425-25860714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25876384-25876673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25876468-25876757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
245, 251
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25876720-25877009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25877224-25877513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25877476-25877765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 79
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr14:25895599-25895888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr14:25836196-25836486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr14:25859837-25860127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr14:25859921-25860211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr14:25876972-25877262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 81
               

               
Conread position:
               
13-303
               

               
Cow position:
               
chr14:25910980-25911272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr14:3156047-3156340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
238, 231
               

               
Conread position:
               
13-305
               

               
Cow position:
               
chr14:25836364-25836658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
13-326
               

               
Cow position:
               
chr14:25795285-25794973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
267, 283
               

               
Conread position:
               
14-290
               

               
Cow position:
               
chr14:3128208-3127932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr14:25784169-25784454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
265, 0
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr14:25836288-25836569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
247, 0
               

               
Conread position:
               
21-300
               

               
Cow position:
               
chr14:25860265-25860546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
22-248
               

               
Cow position:
               
chr14:25910821-25911047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-244
               

               
Cow position:
               
chr14:25836964-25837183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr14:25836544-25836809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr14:25895443-25895708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
25-300
               

               
Cow position:
               
chr14:25859681-25859958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 153
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chr14:3127777-3127496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
28-290
               

               
Cow position:
               
chr14:25894942-25895204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
35-287
               

               
Cow position:
               
chr14:3155412-3155664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-300
               

               
Cow position:
               
chr14:25836050-25836317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
247, 0
               

               
Conread position:
               
35-300
               

               
Cow position:
               
chr14:25860111-25860378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
247, 0
               

               
Conread position:
               
35-300
               

               
Cow position:
               
chr14:25877162-25877429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
35-304
               

               
Cow position:
               
chr14:3155901-3156172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr14:420736-420906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-300
               

               
Cow position:
               
chr14:25835987-25836233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
58-290
               

               
Cow position:
               
chr14:25783370-25783602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr16:14627196-14626890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
256, 246
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr16:14627783-14627461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
164, 158
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr16:14627109-14626823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
253, 243
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr16:14627604-14627327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 87
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr16:14627016-14626738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr16:14627856-14627578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
243, 232
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr16:14627436-14627147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-302
               

               
Cow position:
               
chr16:14627352-14627061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
244, 234
               

               
Conread position:
               
21-290
               

               
Cow position:
               
chr16:14627260-14626991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chr16:14627680-14627395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 131
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr17:22499004-22498717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr17:22589963-22589660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr17:22590047-22589744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr17:22451905-22451679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 74
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr17:22499171-22498936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr17:22452409-22452135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr17:22551956-22551673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr17:22473306-22473593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
247, 237
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr17:22452157-22451871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr17:22553048-22552762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr17:22589458-22589170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr17:22552208-22551906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
90, 94
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr17:22589626-22589324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
236, 258
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr17:22590130-22589828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr17:22590214-22589912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr17:22499087-22498774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
300, 291
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chr17:22589705-22589409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
159, 143
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr17:22589873-22589576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
154, 143
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr17:22473648-22473923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr17:22473564-22473844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-286
               

               
Cow position:
               
chr17:22590290-22590016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
142, 134
               

               
Conread position:
               
12-289
               

               
Cow position:
               
chr17:22499415-22499136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr17:22552284-22552006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-301
               

               
Cow position:
               
chr17:22452233-22451942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
254, 248
               

               
Conread position:
               
13-212
               

               
Cow position:
               
chr17:22551695-22551496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
13-213
               

               
Cow position:
               
chr17:22498742-22498542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-278
               

               
Cow position:
               
chr17:22551779-22551514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-285
               

               
Cow position:
               
chr17:22452316-22452044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr17:22498910-22498633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr17:22499246-22498969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr17:22552451-22552174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr17:22552535-22552258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr17:22552703-22552426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr17:22498826-22498548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr17:22552871-22552592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
13-302
               

               
Cow position:
               
chr17:22552031-22551740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-303
               

               
Cow position:
               
chr17:22552955-22552663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr17:22551863-22551570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr17:22552115-22551822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr17:22552367-22552074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-304
               

               
Cow position:
               
chr17:22552787-22552494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-306
               

               
Cow position:
               
chr17:22499330-22499035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
13-306
               

               
Cow position:
               
chr17:22552619-22552324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
253, 247
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr17:22553122-22552834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
268, 0
               

               
Conread position:
               
21-301
               

               
Cow position:
               
chr17:22589525-22589243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
146, 125
               

               
Conread position:
               
22-304
               

               
Cow position:
               
chr17:22589776-22589492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
260, 0
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr17:22473411-22473676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
226, 218
               

               
Conread position:
               
44-345
               

               
Cow position:
               
chr17:22473262-22473562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
245, 252
               

               
Conread position:
               
78-290
               

               
Cow position:
               
chr17:22553142-22552930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
80-290
               

               
Cow position:
               
chr17:22590306-22590096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr17:22452409-22452207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr18:50022010-50021743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:53586525-53586240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:56494066-56494351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 109
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:53560316-53560602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:55066720-55066434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:42837378-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
167, 151
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:50848641-50848929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:53560148-53560436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:54992874-54993162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:55067056-55066768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:55524034-55524322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:42827542-42827831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:42985506-42985217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
156, 169
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:44184496-44184207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:50021671-50021382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:52448002-52448291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:54966921-54967210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
193, 183
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:42791354-42791655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
281, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:51368045-51367744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
7, 235
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:50245879-50246184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
81, 97
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:50848557-50848862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
275, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr18:50246467-50246775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:43168014-43168336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 0
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:43168182-43168504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 291
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr18:43168266-43168606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 0
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr18:14453149-14452908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
153, 147
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr18:43093111-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:42744158-42743870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:42791775-42792063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:43120352-43120064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:49033159-49032871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:50099870-50100158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:56329628-56329340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:56330048-56329760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr18:56329208-56328905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
280, 0
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:50271432-50271736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:56330132-56329828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
256, 244
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr18:40324241-40323936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:40324661-40324339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
278, 301
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr18:41949377-41949031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
280, 301
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr18:43022175-43021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr18:44240653-44240844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr18:33063958-33063683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr18:44154059-44153791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
73, 77
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr18:44240569-44240847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:41948956-41948672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:42791020-42791304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:42791944-42792228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr18:44184242-44183958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:14453964-14453677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:41948872-41948585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:42675433-42675146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:42792280-42792567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:42985252-42984965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:43023015-43022728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:43175048-43174761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:43175216-43174929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
146, 170
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:44240065-44240352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:44240317-44240604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:50083422-50083709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:50251223-50251510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:50295244-50295531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:51367707-51367420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 94
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr18:42792616-42792906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
286, 0
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr18:53560486-53560777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
170, 160
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:41949124-41948825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
276, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:43022511-43022212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
279, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:43022847-43022548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:43174796-43174497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
277, 0
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr18:40086713-40086409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
158, 31
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr18:41949040-41948739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
277, 0
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr18:42959991-42959699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
282, 232
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr18:43120267-43119966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
238, 252
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr18:50281646-50281949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr18:43119847-43119532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
283, 300
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr18:33064378-33064057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
279, 300
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr18:14453063-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr18:41198556-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 75
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr18:43093937-43093728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr18:42827713-42827923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr18:50048578-50048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr18:52428026-52428261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr18:52428362-52428597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr18:52428530-52428765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr18:52428614-52428849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr18:52433459-52433694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr18:52433543-52433778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr18:52433711-52433946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr18:52433795-52434030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr18:40306226-40306463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr18:56128514-56128751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr18:50100124-50100360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr18:56329542-56329304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr18:56329122-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr18:50282067-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr18:42837627-42837351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr18:50281815-50282091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr18:56329374-56329098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr18:50058642-50058365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr18:52011966-52011686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
157, 166
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr18:50048830-50048549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr18:50083759-50084040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr18:50246302-50246583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr18:50271602-50271883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr18:50271770-50272053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr18:50848896-50849179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 90
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr18:52447753-52448036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr18:1417975-1418259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr18:43093277-43092991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
253, 243
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr18:50030928-50030640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
100, 95
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr18:54979617-54979901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:40086457-40086172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
278, 244
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:41198472-41198759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
249, 243
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:50031009-50030723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:50048746-50048459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:50295581-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:50848224-50848509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:53586690-53586405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
166, 148
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:54980037-54980322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
160, 150
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:55066801-55066516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:56128934-56129218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
232, 194
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:1418143-1418429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:40324575-40324289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
226, 234
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:40324743-40324457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:41198136-41198422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:41198388-41198674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
164, 148
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:42675264-42674978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:42744408-42744122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
157, 148
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:42792029-42792315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:42792197-42792483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:42837963-42837677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:42984999-42984713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:43022426-43022140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:43093193-43092907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:43093613-43093327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:43093853-43093579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
154, 126
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:43167933-43168219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
155, 144
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:43168101-43168387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:43174963-43174677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:44184913-44184627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:44240402-44240688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:44397962-44397676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:44398382-44398096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:49032485-49032199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
99, 106
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50031093-50030810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50048914-50048628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
164, 142
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50049082-50048796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
166, 148
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50058810-50058524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50059230-50058944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50059482-50059196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50059566-50059280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
158, 148
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50083339-50083625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50083591-50083877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50083675-50083961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50083843-50084129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50099032-50099318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50099368-50099654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50099536-50099822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50099620-50099906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50100040-50100326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50246134-50246420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 147
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50246386-50246672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50295413-50295699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:50848980-50849266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
160, 148
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:51400673-51400959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
254, 262
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:51789584-51789298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:51812827-51812541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:52447333-52447619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:52447921-52448207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:53586354-53586068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
160, 141
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:53610326-53610040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:53635651-53635365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:54979449-54979735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:55017937-55018223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:55523449-55523735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:56316442-56316728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:56494153-56494439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr18:43167681-43167969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr18:51812743-51812453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 240
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr18:56247344-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:41198220-41198518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:42674928-42674630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
276, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:42791609-42791907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:42985167-42984869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 70
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:43120182-43119884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:43167849-43168147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
233, 228
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:44253666-44253369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
157, 147
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:49032989-49032691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:50049168-50048868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:51368461-51368163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
164, 148
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:51752026-51751728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:52428110-52428408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
275, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:52428194-52428492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
272, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:52428278-52428576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 73
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:52428446-52428744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
275, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:52433375-52433673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
272, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr18:52433627-52433925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
275, 0
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr18:50021839-50021537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 151
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr18:49021543-49021840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
290, 28
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr18:50099200-50099500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr18:50271518-50271818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr18:50271854-50272153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
165, 147
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr18:1418311-1418612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr18:42791273-42791574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 75
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr18:42960158-42959857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr18:50048998-50048697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr18:56316190-56316491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:41197800-41198102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
157, 142
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:50022262-50021957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:50058726-50058426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
278, 226
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:50059062-50058760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:50059146-50058844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:50099116-50099418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:50271686-50271988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:50848728-50849030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 51
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:53586606-53586304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:54992709-54993011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
150, 158
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:54993045-54993347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
160, 149
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr18:40324491-40324188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
253, 243
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr18:40324407-40324103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr18:43093445-43093141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr18:52448089-52448394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
198, 0
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr18:52428698-52429009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
228, 240
               

               
Conread position:
               
4-310
               

               
Cow position:
               
chr18:52433879-52434190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
228, 240
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr18:51789668-51789361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
232, 240
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr18:40075080-40075400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr18:43022678-43022358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
167, 159
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr18:43120098-43119778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr18:50099284-50099604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr18:55018189-55018508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr18:44240150-44240476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
278, 0
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr18:51765857-51765531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 10
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr18:44154481-44154148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 302
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr18:43175131-43174788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
276, 292
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr18:40306731-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr18:50849065-50849347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr18:49022872-49023157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 50
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr18:42827462-42827746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr18:14453230-14452945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr18:50059313-50059012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
277, 0
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr18:50098949-50099250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr18:40085961-40085664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr18:50059731-50059448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr18:55008453-55008734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 92
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr18:40086876-40086585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
275, 102
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr18:42985332-42985037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr18:52427945-52428240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr18:52433126-52433421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
269, 0
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr18:52433294-52433589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
272, 0
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr18:50245970-50246249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr18:50246222-50246504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr18:51812907-51812625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr18:56128098-56128380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-300
               

               
Cow position:
               
chr18:56247422-56247132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
8-302
               

               
Cow position:
               
chr18:50281735-50282031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
8-304
               

               
Cow position:
               
chr18:56434359-56434656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
155, 5
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr18:51789748-51789432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr18:55008788-55009103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 89
               

               
Conread position:
               
9-243
               

               
Cow position:
               
chr18:56248097-56247864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
9-280
               

               
Cow position:
               
chr18:56248179-56247910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr18:44253745-44253463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
270, 0
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr18:53509468-53509748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
164, 137
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr18:53525922-53526202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
164, 140
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr18:53559736-53560016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr18:33063868-33063587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr18:44239987-44240268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
221, 236
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr18:40074917-40075214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
283, 0
               

               
Conread position:
               
9-306
               

               
Cow position:
               
chr18:50251145-50251442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
155, 136
               

               
Conread position:
               
10-278
               

               
Cow position:
               
chr18:43022588-43022320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr18:42792455-42792735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr18:44184655-44184375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr18:44240240-44240520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-300
               

               
Cow position:
               
chr18:51789074-51788782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 144
               

               
Conread position:
               
10-300
               

               
Cow position:
               
chr18:51969654-51969937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
272, 142
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr18:50099794-50100090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
138, 150
               

               
Conread position:
               
10-306
               

               
Cow position:
               
chr18:50281989-50282287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
142, 150
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr18:50099962-50100261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
272, 0
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr18:51752104-51751797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
64, 70
               

               
Conread position:
               
10-325
               

               
Cow position:
               
chr18:51812317-51812003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
140, 144
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr18:51765935-51765620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
10-334
               

               
Cow position:
               
chr18:44184739-44184415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
294, 282
               

               
Conread position:
               
11-229
               

               
Cow position:
               
chr18:44153890-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr18:43167772-43168051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
268, 0
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr18:53526176-53526453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr18:56316113-56316392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-304
               

               
Cow position:
               
chr18:56128773-56129068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
281, 0
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr18:42959655-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr18:49023047-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr18:56247748-56247521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr18:50084019-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr18:56329954-56329724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-243
               

               
Cow position:
               
chr18:14453871-14453640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 66
               

               
Conread position:
               
12-280
               

               
Cow position:
               
chr18:53586934-53586666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
155, 161
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr18:49032393-49032121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr18:33064705-33064430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr18:53509303-53509578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-287
               

               
Cow position:
               
chr18:53525757-53526034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
240, 0
               

               
Conread position:
               
12-289
               

               
Cow position:
               
chr18:53559823-53560100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-289
               

               
Cow position:
               
chr18:55523541-55523818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr18:33064117-33063839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr18:33064201-33063923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr18:33064285-33064007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr18:33064453-33064175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr18:33092873-33092595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
156, 140
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr18:44398458-44398180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr18:49022711-49022989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
216, 211
               
12-290UCSC Genome Browser

               
Conread position:
               

               

               
Cow position:
               
chr18:49032897-49032619 (view  custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
150, 140
               
12-290UCSC Genome Browser

               
               
               
Conread position:

               
               
               
Cow position:
chr18:49033065-49032787 (view  custom track)

               
               
               
Alignm length:
280

               
               
               
Alignm identity:
189

               
               
               
Alignm E-value:
2e-35

               
               
               
Alignm gaps (pig, cow):
61, 71
12-290UCSC Genome Browser

               
               
               
Conread position:

               
               
               
Cow position:
chr18:49033233-49032955 (view  custom track)

               
               
               
Alignm length:
279

               
               
               
Alignm identity:
180

               
               
               
Alignm E-value:
4e-29

               
               
               
Alignm gaps (pig, cow):
0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr18:50059390-50059112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr18:51765345-51765067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:186
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr18:52012378-52012100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:179
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):147, 158

               
               
               Conread position:12-290
               
               
               Cow position:chr18:53635475-53635197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr18:55066961-55066683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:186
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-300
               
               
               Cow position:chr18:40324315-40324025 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):280, 0

               
               
               Conread position:12-302
               
               
               Cow position:chr18:42744484-42744192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:201
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):270, 0

               
               
               Conread position:12-303
               
               
               Cow position:chr18:53635895-53635602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:181
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):260, 0

               
               
               Conread position:12-304
               
               
               Cow position:chr18:51765429-51765135 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:191
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):270, 0

               
               
               Conread position:12-307
               
               
               Cow position:chr18:42791197-42791494 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:205
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):280, 0

               
               
               Conread position:12-325
               
               
               Cow position:chr18:42744232-42743920 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:216
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):149, 140

               
               
               Conread position:12-325
               
               
               Cow position:chr18:51789828-51789516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:195
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):270, 291

               
               
               Conread position:12-325
               
               
               Cow position:chr18:53586430-53586118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:204
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):275, 295

               
               
               Conread position:12-326
               
               
               Cow position:chr18:42837451-42837138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:208
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):280, 0

               
               
               Conread position:12-329
               
               
               Cow position:chr18:55523625-55523941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:224
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):63, 76

               
               
               Conread position:13-211
               
               
               Cow position:chr18:42693143-42692944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:137
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):130, 0

               
               
               Conread position:13-213
               
               
               Cow position:chr18:43053393-43053193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-214
               
               
               Cow position:chr18:50849241-50849442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-228
               
               
               Cow position:chr18:51400934-51401149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:146
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-229
               
               
               Cow position:chr18:51969816-51970032 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):71, 62

               
               
               Conread position:13-233
               
               
               Cow position:chr18:33092704-33092484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:148
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):209, 213

               
               
               Conread position:13-233
               
               
               Cow position:chr18:51368284-51368064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-239
               
               
               Cow position:chr18:51367445-51367219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-239
               
               
               Cow position:chr18:51751849-51751623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-240
               
               
               Cow position:chr18:50049245-50049014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:13-242
               
               
               Cow position:chr18:40075173-40075402 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:147
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-242
               
               
               Cow position:chr18:52447510-52447739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-243
               
               
               Cow position:chr18:43119753-43119523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-243
               
               
               Cow position:chr18:51812230-51812000 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-245
               
               
               Cow position:chr18:51812146-51811914 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-248
               
               
               Cow position:chr18:40085870-40085634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):130, 0

               
               
               Conread position:13-248
               
               
               Cow position:chr18:51839075-51838840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-249
               
               
               Cow position:chr18:44154133-44153899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):64, 75

               
               
               Conread position:13-271
               
               
               Cow position:chr18:51367613-51367355 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-273
               
               
               Cow position:chr18:44239907-44240167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):28, 33

               
               
               Conread position:13-274
               
               
               Cow position:chr18:44397785-44397524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:169
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-278
               
               
               Cow position:chr18:40086621-40086351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):79, 24

               
               
               Conread position:13-278
               
               
               Cow position:chr18:41948694-41948429 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-278
               
               
               Cow position:chr18:41949198-41948933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:190
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-278
               
               
               Cow position:chr18:42744063-42743798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:185
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-278
               
               
               Cow position:chr18:42985410-42985145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):74, 62

               
               
               Conread position:13-279
               
               
               Cow position:chr18:42959897-42959640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):145, 0

               
               
               Conread position:13-280
               
               
               Cow position:chr18:33092788-33092521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-280
               
               
               Cow position:chr18:41948610-41948343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-280
               
               
               Cow position:chr18:55008961-55009228 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:174
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):161, 169

               
               
               Conread position:13-285
               
               
               Cow position:chr18:42693478-42693205 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):253, 0

               
               
               Conread position:13-286
               
               
               Cow position:chr18:55523962-55524235 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):67, 76

               
               
               Conread position:13-287
               
               
               Cow position:chr18:42675003-42674729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr18:42985074-42984800 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:188
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):74, 66

               
               
               Conread position:13-287
               
               
               Cow position:chr18:44397869-44397595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr18:44398205-44397931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:180
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr18:50022169-50021892 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):100, 154

               
               
               Conread position:13-287
               
               
               Cow position:chr18:50048653-50048379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:183
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr18:50083936-50084210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr18:52427699-52427973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr18:53559992-53560266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:178
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):76, 71

               
               
               Conread position:13-288
               
               
               Cow position:chr18:42827638-42827915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-288
               
               
               Cow position:chr18:43048662-43048385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:183
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-288
               
               
               Cow position:chr18:50848401-50848678 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:195
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):85, 79

               
               
               Conread position:13-288
               
               
               Cow position:chr18:54980298-54980573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):151, 140

               
               
               Conread position:13-289
               
               
               Cow position:chr18:33064620-33064342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:186
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr18:40075005-40075281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):32, 17

               
               
               Conread position:13-289
               
               
               Cow position:chr18:40075257-40075533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:178
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):32, 24

               
               
               Conread position:13-289
               
               
               Cow position:chr18:41949282-41949004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:194
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr18:42674667-42674391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr18:42960233-42959957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr18:54979878-54980154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:179
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):158, 149

               
               
               Conread position:13-289
               
               
               Cow position:chr18:55018030-55018306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):72, 85

               
               
               Conread position:13-289
               
               
               Cow position:chr18:55018282-55018558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):74, 66

               
               
               Conread position:13-289
               
               
               Cow position:chr18:56434279-56434555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:1418236-1418513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:33064536-33064259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):231, 244

               
               
               Conread position:13-290
               
               
               Cow position:chr18:33064788-33064511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):75, 64

               
               
               Conread position:13-290
               
               
               Cow position:chr18:33093040-33092763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:40075425-40075702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:41197557-41197834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:41198061-41198338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:194
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):60, 67

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42674751-42674474 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42674835-42674558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42675087-42674810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):154, 148

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42744651-42744374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42791702-42791979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42837534-42837257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42837702-42837425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42837786-42837509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42837870-42837593 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):155, 139

               
               
               Conread position:13-290
               
               
               Cow position:chr18:42984906-42984629 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:43119921-43119644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:190
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):61, 75

               
               
               Conread position:13-290
               
               
               Cow position:chr18:43174870-43174593 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):214, 209

               
               
               Conread position:13-290
               
               
               Cow position:chr18:43175290-43175013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:44398037-44397760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:44398289-44398012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):251, 235

               
               
               Conread position:13-290
               
               
               Cow position:chr18:49032560-49032283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:49032644-49032367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:50059641-50059364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:50848485-50848762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:50848821-50849098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:195
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):85, 80

               
               
               Conread position:13-290
               
               
               Cow position:chr18:51765260-51764983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):155, 148

               
               
               Conread position:13-290
               
               
               Cow position:chr18:51812398-51812121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):221, 226

               
               
               Conread position:13-290
               
               
               Cow position:chr18:51839159-51838882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:52447846-52448123 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:53636062-53635785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:54979794-54980071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):150, 140

               
               
               Conread position:13-290
               
               
               Cow position:chr18:54992802-54993079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):237, 241

               
               
               Conread position:13-290
               
               
               Cow position:chr18:54993390-54993667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:180
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):151, 141

               
               
               Conread position:13-290
               
               
               Cow position:chr18:55008877-55009154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):158, 149

               
               
               Conread position:13-290
               
               
               Cow position:chr18:55017778-55018055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:174
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:55018114-55018391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):169, 141

               
               
               Conread position:13-290
               
               
               Cow position:chr18:56316283-56316560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr18:56329281-56329004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-291
               
               
               Cow position:chr18:44154301-44154022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-291
               
               
               Cow position:chr18:54993306-54993584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:181
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):29, 15

               
               
               Conread position:13-293
               
               
               Cow position:chr18:49022964-49023246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):61, 70

               
               
               Conread position:13-293
               
               
               Cow position:chr18:51789491-51789210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):61, 74

               
               
               Conread position:13-297
               
               
               Cow position:chr18:43048578-43048294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-298
               
               
               Cow position:chr18:51788987-51788700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:33064032-33063743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):263, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:42675171-42674882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):238, 232

               
               
               Conread position:13-300
               
               
               Cow position:chr18:42744315-42744026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:194
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:42791114-42791403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:196
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):84, 78

               
               
               Conread position:13-300
               
               
               Cow position:chr18:42960065-42959776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):64, 72

               
               
               Conread position:13-300
               
               
               Cow position:chr18:42984822-42984533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:43022333-43022044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:188
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:43120005-43119716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):149, 160

               
               
               Conread position:13-300
               
               
               Cow position:chr18:51766016-51765727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):164, 169

               
               
               Conread position:13-300
               
               
               Cow position:chr18:51789155-51788866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):221, 225

               
               
               Conread position:13-300
               
               
               Cow position:chr18:51789407-51789118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:51812650-51812361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:189
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:51839243-51838954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):85, 79

               
               
               Conread position:13-300
               
               
               Cow position:chr18:51969248-51969528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):266, 38

               
               
               Conread position:13-300
               
               
               Cow position:chr18:51969407-51969694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):279, 207

               
               
               Conread position:13-300
               
               
               Cow position:chr18:52427615-52427904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:52432964-52433253 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:52433048-52433337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:189
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):263, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr18:52433216-52433505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):62, 67

               
               
               Conread position:13-300
               
               
               Cow position:chr18:52447090-52447379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:192
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):271, 0

               
               
               Conread position:13-301
               
               
               Cow position:chr18:44184316-44184026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):74, 70

               
               
               Conread position:13-302
               
               
               Cow position:chr18:42744567-42744276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:201
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-302
               
               
               Cow position:chr18:51752185-51751894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-303
               
               
               Cow position:chr18:41948778-41948486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-303
               
               
               Cow position:chr18:42693730-42693438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:198
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):261, 0

               
               
               Conread position:13-303
               
               
               Cow position:chr18:42792122-42792414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:207
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-303
               
               
               Cow position:chr18:50083516-50083808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:199
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):150, 138

               
               
               Conread position:13-304
               
               
               Cow position:chr18:42790946-42791239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:202
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):147, 139

               
               
               Conread position:13-304
               
               
               Cow position:chr18:50022424-50022128 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:199
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:13-304
               
               
               Cow position:chr18:50250984-50251274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):85, 80

               
               
               Conread position:13-304
               
               
               Cow position:chr18:50849157-50849450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:191
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-304
               
               
               Cow position:chr18:54993642-54993933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:181
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-305
               
               
               Cow position:chr18:42791870-42792164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):239, 234

               
               
               Conread position:13-306
               
               
               Cow position:chr18:41197725-41198020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-306
               
               
               Cow position:chr18:41198313-41198608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:202
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-307
               
               
               Cow position:chr18:42792374-42792670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:206
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-307
               
               
               Cow position:chr18:44398121-44397824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:205
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):279, 0

               
               
               Conread position:13-308
               
               
               Cow position:chr18:51765176-51764883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:203
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):289, 270

               
               
               Conread position:13-317
               
               
               Cow position:chr18:41197641-41197944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):276, 283

               
               
               Conread position:13-321
               
               
               Cow position:chr18:44240495-44240806 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:206
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-324
               
               
               Cow position:chr18:51400598-51400908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:211
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):232, 241

               
               
               Conread position:13-324
               
               
               Cow position:chr18:51839327-51839017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:196
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):276, 288

               
               
               Conread position:13-325
               
               
               Cow position:chr18:43093520-43093209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):289, 0

               
               
               Conread position:13-325
               
               
               Cow position:chr18:51752269-51751958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:210
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):274, 0

               
               
               Conread position:13-325
               
               
               Cow position:chr18:51874206-51874517 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:198
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):244, 230

               
               
               Conread position:13-325
               
               
               Cow position:chr18:53526094-53526405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:192
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):278, 283

               
               
               Conread position:13-327
               
               
               Cow position:chr18:54967938-54968253 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:200
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):148, 94

               
               
               Conread position:13-328
               
               
               Cow position:chr18:42959738-42959420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-347
               
               
               Cow position:chr18:33092956-33092623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:218
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):155, 138

               
               
               Conread position:14-290
               
               
               Cow position:chr18:14454037-14453761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:14-290
               
               
               Cow position:chr18:42985577-42985301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):227, 244

               
               
               Conread position:14-290
               
               
               Cow position:chr18:56247662-56247392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):77, 88

               
               
               Conread position:14-292
               
               
               Cow position:chr18:52447007-52447287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):237, 227

               
               
               Conread position:14-307
               
               
               Cow position:chr18:51874291-51874586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):151, 137

               
               
               Conread position:15-290
               
               
               Cow position:chr18:42960315-42960040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:172
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:15-290
               
               
               Cow position:chr18:43023087-43022812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):72, 61

               
               
               Conread position:15-300
               
               
               Cow position:chr18:42675337-42675050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:16-279
               
               
               Cow position:chr18:42694147-42693884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:16-304
               
               
               Cow position:chr18:50058882-50058592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:17-300
               
               
               Cow position:chr18:1417820-1418105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):144, 135

               
               
               Conread position:17-300
               
               
               Cow position:chr18:42675502-42675218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):265, 10

               
               
               Conread position:17-325
               
               
               Cow position:chr18:53498462-53498769 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:198
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):5, 48

               
               
               Conread position:17-328
               
               
               Cow position:chr18:44154382-44154067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:207
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:18-290
               
               
               Cow position:chr18:40324813-40324541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:185
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:18-290
               
               
               Cow position:chr18:43048741-43048469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:18-290
               
               
               Cow position:chr18:50058964-50058692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:182
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:18-302
               
               
               Cow position:chr18:40075346-40075632 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):69, 59

               
               
               Conread position:19-287
               
               
               Cow position:chr18:55008631-55008899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:179
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):65, 71

               
               
               Conread position:21-290
               
               
               Cow position:chr18:42791458-42791727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):70, 77

               
               
               Conread position:21-290
               
               
               Cow position:chr18:44253817-44253548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):191, 184

               
               
               Conread position:22-239
               
               
               Cow position:chr18:56129036-56129252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:142
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:22-280
               
               
               Cow position:chr18:40307084-40307342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:22-280
               
               
               Cow position:chr18:56494255-56494513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):256, 246

               
               
               Conread position:22-289
               
               
               Cow position:chr18:56128868-56129136 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):260, 0

               
               
               Conread position:22-290
               
               
               Cow position:chr18:40306580-40306848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:174
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):235, 226

               
               
               Conread position:22-290
               
               
               Cow position:chr18:40306916-40307184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):75, 53

               
               
               Conread position:22-290
               
               
               Cow position:chr18:53635549-53635281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:22-290
               
               
               Cow position:chr18:56128616-56128884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:22-300
               
               
               Cow position:chr18:53635297-53635018 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:177
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):260, 0

               
               
               Conread position:24-303
               
               
               Cow position:chr18:42693635-42693354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):256, 0

               
               
               Conread position:25-287
               
               
               Cow position:chr18:56329857-56329595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:169
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):51, 61

               
               
               Conread position:25-289
               
               
               Cow position:chr18:50246575-50246839 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):148, 134

               
               
               Conread position:25-290
               
               
               Cow position:chr18:14453294-14453029 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:183
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):123, 130

               
               
               Conread position:25-290
               
               
               Cow position:chr18:50099473-50099738 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:185
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:25-290
               
               
               Cow position:chr18:51969335-51969600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:168
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:25-290
               
               
               Cow position:chr18:53635378-53635113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:167
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:25-290
               
               
               Cow position:chr18:56329437-56329172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:25-302
               
               
               Cow position:chr18:51766087-51765809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):236, 12

               
               
               Conread position:25-304
               
               
               Cow position:chr18:43167618-43167899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):100, 90

               
               
               Conread position:25-304
               
               
               Cow position:chr18:50030823-50030537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:25-304
               
               
               Cow position:chr18:53498305-53498583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:186
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):58, 64

               
               
               Conread position:25-307
               
               
               Cow position:chr18:50250915-50251193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):57, 9

               
               
               Conread position:25-325
               
               
               Cow position:chr18:51752340-51752042 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:202
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):45, 12

               
               
               Conread position:26-290
               
               
               Cow position:chr18:40306164-40306428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:26-290
               
               
               Cow position:chr18:43093675-43093411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:190
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):129, 122

               
               
               Conread position:26-325
               
               
               Cow position:chr18:44253896-44253598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):278, 269

               
               
               Conread position:28-287
               
               
               Cow position:chr18:33064941-33064682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:28-289
               
               
               Cow position:chr18:53560089-53560352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:177
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):13, 64

               
               
               Conread position:29-287
               
               
               Cow position:chr18:50030732-50030472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):119, 6

               
               
               Conread position:29-290
               
               
               Cow position:chr18:53610384-53610124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:30-302
               
               
               Cow position:chr18:49033383-49033109 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:175
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):262, 0

               
               
               Conread position:35-287
               
               
               Cow position:chr18:42827408-42827660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:35-289
               
               
               Cow position:chr18:51400536-51400792 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):247, 0

               
               
               Conread position:35-290
               
               
               Cow position:chr18:40324880-40324625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:35-300
               
               
               Cow position:chr18:42744713-42744446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:180
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):251, 0

               
               
               Conread position:36-261
               
               
               Cow position:chr18:53610462-53610237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):69, 83

               
               
               Conread position:36-287
               
               
               Cow position:chr18:50021720-50021469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):47, 34

               
               
               Conread position:37-285
               
               
               Cow position:chr18:50295362-50295610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:37-304
               
               
               Cow position:chr18:53525697-53525967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:38-301
               
               
               Cow position:chr18:50083288-50083554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):7, 114

               
               
               Conread position:41-290
               
               
               Cow position:chr18:41197501-41197750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:43-286
               
               
               Cow position:chr18:56493856-56494099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:161
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):41, 46

               
               
               Conread position:43-287
               
               
               Cow position:chr18:56494024-56494268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:163
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:43-289
               
               
               Cow position:chr18:55008571-55008817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):124, 110

               
               
               Conread position:43-289
               
               
               Cow position:chr18:56493940-56494186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:43-291
               
               
               Cow position:chr18:54979572-54979820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:166
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:44-290
               
               
               Cow position:chr18:50295201-50295447 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:161
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):155, 140

               
               
               Conread position:44-300
               
               
               Cow position:chr18:56248225-56247972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):248, 53

               
               
               Conread position:45-239
               
               
               Cow position:chr18:22634576-22634764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:134
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:47-290
               
               
               Cow position:chr18:50031134-50030894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):121, 105

               
               
               Conread position:47-304
               
               
               Cow position:chr18:53636112-53635853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):235, 0

               
               
               Conread position:47-307
               
               
               Cow position:chr18:50098907-50099169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:176
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):67, 87

               
               
               Conread position:49-285
               
               
               Cow position:chr18:53559692-53559928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):40, 28

               
               
               Conread position:49-287
               
               
               Cow position:chr18:55067092-55066854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:158
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):205, 201

               
               
               Conread position:52-292
               
               
               Cow position:chr18:50083219-50083460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):43, 48

               
               
               Conread position:54-304
               
               
               Cow position:chr18:42790903-42791155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:161
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:56-287
               
               
               Cow position:chr18:33093081-33092850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:149
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:56-291
               
               
               Cow position:chr18:42693771-42693535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:57-300
               
               
               Cow position:chr18:51400306-51400551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:160
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):17, 22

               
               
               Conread position:58-244
               
               
               Cow position:chr18:43175581-43175395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:58-280
               
               
               Cow position:chr18:55075115-55075338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:145
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):164, 0

               
               
               Conread position:79-303
               
               
               Cow position:chr18:1417966-1418192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:161
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):206, 0

               
               
               Conread position:82-290
               
               
               Cow position:chr18:44184919-44184711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:83-302
               
               
               Cow position:chr18:41949380-41949159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):44, 51

               
               
               Conread position:115-306
               
               
               Cow position:chr18:56316049-56316242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):167, 0

               
               
               Conread position:1-290
               
               
               Cow position:chr19:23614325-23614615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:1-302
               
               
               Cow position:chr19:23649944-23650247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):281, 0

               
               
               Conread position:1-304
               
               
               Cow position:chr19:23614745-23615051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:211
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:2-290
               
               
               Cow position:chr19:23649693-23649981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):143, 152

               
               
               Conread position:2-300
               
               
               Cow position:chr19:23597252-23597552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:203
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):284, 0

               
               
               Conread position:2-302
               
               
               Cow position:chr19:23613571-23613873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:205
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):283, 0

               
               
               Conread position:3-304
               
               
               Cow position:chr19:23613404-23613707 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):244, 251

               
               
               Conread position:4-242
               
               
               Cow position:chr19:14948326-14948088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:167
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-243
               
               
               Cow position:chr19:14940801-14941040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-244
               
               
               Cow position:chr19:20677924-20678164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:158
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):99, 83

               
               
               Conread position:4-244
               
               
               Cow position:chr19:20678344-20678584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:156
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):100, 91

               
               
               Conread position:4-287
               
               
               Cow position:chr19:23650031-23650314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-289
               
               
               Cow position:chr19:23613993-23614280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-289
               
               
               Cow position:chr19:23614833-23615118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr19:20678260-20678546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr19:23613825-23614111 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):88, 82

               
               
               Conread position:4-290
               
               
               Cow position:chr19:23614497-23614783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):160, 148

               
               
               Conread position:4-290
               
               
               Cow position:chr19:23614581-23614867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):247, 240

               
               
               Conread position:4-290
               
               
               Cow position:chr19:23649443-23649729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):94, 89

               
               
               Conread position:4-290
               
               
               Cow position:chr19:23649611-23649897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:203
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):225, 234

               
               
               Conread position:4-290
               
               
               Cow position:chr19:23650115-23650401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):72, 83

               
               
               Conread position:4-298
               
               
               Cow position:chr19:23650199-23650494 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr19:20677672-20677970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:194
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-301
               
               
               Cow position:chr19:20677752-20678055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):13, 93

               
               
               Conread position:4-301
               
               
               Cow position:chr19:23614161-23614460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-302
               
               
               Cow position:chr19:23649527-23649827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:203
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):94, 89

               
               
               Conread position:4-303
               
               
               Cow position:chr19:14959185-14958890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:199
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):278, 66

               
               
               Conread position:4-307
               
               
               Cow position:chr19:43570325-43570030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:200
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):281, 47

               
               
               Conread position:5-300
               
               
               Cow position:chr19:23614078-23614375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:211
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):247, 239

               
               
               Conread position:7-290
               
               
               Cow position:chr19:14960415-14960134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):262, 0

               
               
               Conread position:9-300
               
               
               Cow position:chr19:23613914-23614207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):273, 0

               
               
               Conread position:10-337
               
               
               Cow position:chr19:20635486-20635159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:205
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):241, 234

               
               
               Conread position:11-287
               
               
               Cow position:chr19:14960077-14959801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:183
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-287
               
               
               Cow position:chr19:23597430-23597705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:192
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-289
               
               
               Cow position:chr19:14940137-14940414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:193
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr19:14940389-14940667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):63, 68

               
               
               Conread position:12-290
               
               
               Cow position:chr19:14940557-14940835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr19:14959588-14959310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr19:23597178-23597456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr19:23613665-23613943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:195
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr19:43570243-43569965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):241, 234

               
               
               Conread position:12-303
               
               
               Cow position:chr19:23649787-23650080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:197
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:12-325
               
               
               Cow position:chr19:14940053-14940365 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:211
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):264, 291

               
               
               Conread position:13-209
               
               
               Cow position:chr19:23597515-23597711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-285
               
               
               Cow position:chr19:14959098-14958826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-288
               
               
               Cow position:chr19:14948484-14948208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):267, 83

               
               
               Conread position:13-289
               
               
               Cow position:chr19:23597347-23597625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:193
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr19:14940222-14940499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr19:14940474-14940751 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:191
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr19:14948401-14948124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr19:20677597-20677874 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:176
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr19:23597095-23597372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:174
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr19:23613750-23614027 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:192
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-291
               
               
               Cow position:chr19:43570158-43569880 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr19:20635399-20635110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:199
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):148, 155

               
               
               Conread position:13-300
               
               
               Cow position:chr19:23614422-23614711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:202
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):148, 138

               
               
               Conread position:13-300
               
               
               Cow position:chr19:43569990-43569703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:180
               
               
               Alignm E-value:7e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-301
               
               
               Cow position:chr19:23597014-23597301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):30, 19

               
               
               Conread position:13-302
               
               
               Cow position:chr19:23649872-23650163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):63, 76

               
               
               Conread position:13-307
               
               
               Cow position:chr19:23613498-23613794 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):276, 0

               
               
               Conread position:14-301
               
               
               Cow position:chr19:43570398-43570120 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):268, 5

               
               
               Conread position:16-301
               
               
               Cow position:chr19:14959257-14958976 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:183
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):266, 135

               
               
               Conread position:17-290
               
               
               Cow position:chr19:14940730-14941003 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:18-290
               
               
               Cow position:chr19:14960154-14959882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:189
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:21-290
               
               
               Cow position:chr19:14940650-14940919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:24-290
               
               
               Cow position:chr19:20635556-20635290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):154, 128

               
               
               Conread position:25-274
               
               
               Cow position:chr19:20635303-20635054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:25-304
               
               
               Cow position:chr19:20635639-20635358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):257, 0

               
               
               Conread position:37-287
               
               
               Cow position:chr19:14939993-14940244 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:37-302
               
               
               Cow position:chr19:14959646-14959380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):47, 12

               
               
               Conread position:37-302
               
               
               Cow position:chr19:23613354-23613621 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:181
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):242, 0

               
               
               Conread position:43-300
               
               
               Cow position:chr19:20678215-20678474 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):239, 0

               
               
               Conread position:58-278
               
               
               Cow position:chr19:14960448-14960228 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:150
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):9, 22

               
               
               Conread position:3-249
               
               
               Cow position:chr2:78754566-78754808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):124, 0

               
               
               Conread position:3-290
               
               
               Cow position:chr2:78754970-78755257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:3-291
               
               
               Cow position:chr2:78755722-78756010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):40, 34

               
               
               Conread position:3-302
               
               
               Cow position:chr2:78755974-78756276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:209
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):71, 140

               
               
               Conread position:3-304
               
               
               Cow position:chr2:78755054-78755356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):279, 0

               
               
               Conread position:4-243
               
               
               Cow position:chr2:82799665-82799904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:164
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):41, 33

               
               
               Conread position:4-287
               
               
               Cow position:chr2:86465153-86465436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:174
               
               
               Alignm E-value:7e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-288
               
               
               Cow position:chr2:5874875-5874589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr2:78754887-78755173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-313
               
               
               Cow position:chr2:78755390-78755699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):301, 123

               
               
               Conread position:4-325
               
               
               Cow position:chr2:78755223-78755540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):278, 114

               
               
               Conread position:9-278
               
               
               Cow position:chr2:78756065-78756332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:189
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):94, 49

               
               
               Conread position:12-290
               
               
               Cow position:chr2:82799505-82799783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):154, 142

               
               
               Conread position:12-290
               
               
               Cow position:chr2:82799757-82800035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr2:82799841-82800119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:177
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr2:82800093-82800371 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:182
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-197
               
               
               Cow position:chr2:82800262-82800446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-230
               
               
               Cow position:chr2:5874614-5874397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:143
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-242
               
               
               Cow position:chr2:82799590-82799819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-280
               
               
               Cow position:chr2:48689477-48689211 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:13-280
               
               
               Cow position:chr2:78754492-78754755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):198, 0

               
               
               Conread position:13-288
               
               
               Cow position:chr2:5874698-5874421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:183
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):70, 76

               
               
               Conread position:13-290
               
               
               Cow position:chr2:78754410-78754685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:13-304
               
               
               Cow position:chr2:78754812-78755105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:207
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-307
               
               
               Cow position:chr2:78755816-78756113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:199
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):91, 82

               
               
               Conread position:16-303
               
               
               Cow position:chr2:48689391-48689102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):229, 257

               
               
               Conread position:20-288
               
               
               Cow position:chr2:78754165-78754435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:177
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):256, 0

               
               
               Conread position:25-288
               
               
               Cow position:chr2:5874770-5874505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:168
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):257, 0

               
               
               Conread position:25-290
               
               
               Cow position:chr2:82799938-82800203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:25-290
               
               
               Cow position:chr2:82800022-82800287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:28-300
               
               
               Cow position:chr2:78755663-78755937 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):142, 124

               
               
               Conread position:36-290
               
               
               Cow position:chr2:82799447-82799699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):215, 11

               
               
               Conread position:45-290
               
               
               Cow position:chr2:86465950-86466195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):143, 139

               
               
               Conread position:8-290
               
               
               Cow position:chr21:34223077-34222795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:188
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):36, 29

               
               
               Conread position:12-242
               
               
               Cow position:chr21:12659231-12659461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:151
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):52, 59

               
               
               Conread position:13-243
               
               
               Cow position:chr21:34222820-34222590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr21:12608698-12608424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:178
               
               
               Alignm E-value:8e-27
               
               
               Alignm gaps (pig, cow):65, 52

               
               
               Conread position:16-290
               
               
               Cow position:chr21:34222902-34222627 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:21-286
               
               
               Cow position:chr21:12608774-12608509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):140, 131

               
               
               Conread position:58-287
               
               
               Cow position:chr21:12608905-12608676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:150
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-289
               
               
               Cow position:chr22:12458052-12457762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:204
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):84, 74

               
               
               Conread position:2-290
               
               
               Cow position:chr22:12399203-12398915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:201
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):74, 84

               
               
               Conread position:3-300
               
               
               Cow position:chr22:12499512-12499811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:206
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):276, 0

               
               
               Conread position:3-302
               
               
               Cow position:chr22:12475747-12475446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:206
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):276, 0

               
               
               Conread position:3-304
               
               
               Cow position:chr22:12476083-12475780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:211
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):271, 0

               
               
               Conread position:3-306
               
               
               Cow position:chr22:12499176-12499481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:207
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):279, 0

               
               
               Conread position:4-287
               
               
               Cow position:chr22:12418972-12418689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12385275-12384989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):157, 147

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12399537-12399251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12399621-12399335 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:201
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12399705-12399419 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12418804-12418518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12431265-12430979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:202
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12431601-12431315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:184
               
               
               Alignm E-value:8e-27
               
               
               Alignm gaps (pig, cow):190, 185

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12431769-12431483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):26, 32

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12458469-12458182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:184
               
               
               Alignm E-value:9e-28
               
               
               Alignm gaps (pig, cow):277, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12458553-12458267 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12475578-12475292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12475662-12475376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12476166-12475880 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12499093-12499379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):144, 150

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12499597-12499883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr22:12499681-12499967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-293
               
               
               Cow position:chr22:12399033-12398744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-293
               
               
               Cow position:chr22:12431013-12430722 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:204
               
               
               Alignm E-value:5.04467e-44
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-293
               
               
               Cow position:chr22:12431517-12431226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):107, 101

               
               
               Conread position:4-300
               
               
               Cow position:chr22:12476250-12475952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):282, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr22:12499009-12499307 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:203
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):282, 0

               
               
               Conread position:4-302
               
               
               Cow position:chr22:12399369-12399069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):157, 148

               
               
               Conread position:4-302
               
               
               Cow position:chr22:12418888-12418588 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):279, 0

               
               
               Conread position:4-302
               
               
               Cow position:chr22:12475914-12475614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):288, 0

               
               
               Conread position:4-302
               
               
               Cow position:chr22:12476334-12476034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:205
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-302
               
               
               Cow position:chr22:12498925-12499225 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:207
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):275, 0

               
               
               Conread position:4-304
               
               
               Cow position:chr22:12431181-12430879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:203
               
               
               Alignm E-value:7e-36
               
               
               Alignm gaps (pig, cow):226, 238

               
               
               Conread position:4-307
               
               
               Cow position:chr22:12499345-12499650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:206
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):288, 0

               
               
               Conread position:4-324
               
               
               Cow position:chr22:12499429-12499748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:215
               
               
               Alignm E-value:8e-38
               
               
               Alignm gaps (pig, cow):278, 299

               
               
               Conread position:4-325
               
               
               Cow position:chr22:12476418-12476099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:213
               
               
               Alignm E-value:6e-35
               
               
               Alignm gaps (pig, cow):279, 299

               
               
               Conread position:4-355
               
               
               Cow position:chr22:12458217-12457868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:225
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):288, 299

               
               
               Conread position:5-300
               
               
               Cow position:chr22:12431432-12431135 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:205
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):154, 143

               
               
               Conread position:9-269
               
               
               Cow position:chr22:12430840-12430579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:167
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):249, 0

               
               
               Conread position:10-209
               
               
               Cow position:chr22:11641255-11641454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):63, 77

               
               
               Conread position:10-239
               
               
               Cow position:chr22:46654326-46654555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):78, 68

               
               
               Conread position:10-290
               
               
               Cow position:chr22:11666592-11666872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:10-290
               
               
               Cow position:chr22:12430923-12430643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:10-290
               
               
               Cow position:chr22:12431343-12431063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:197
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:10-300
               
               
               Cow position:chr22:46654158-46654450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):78, 68

               
               
               Conread position:12-240
               
               
               Cow position:chr22:11640921-11641149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:156
               
               
               Alignm E-value:9e-28
               
               
               Alignm gaps (pig, cow):87, 72

               
               
               Conread position:12-241
               
               
               Cow position:chr22:11666678-11666907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):154, 163

               
               
               Conread position:12-271
               
               
               Cow position:chr22:11701416-11701675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:173
               
               
               Alignm E-value:8e-27
               
               
               Alignm gaps (pig, cow):154, 163

               
               
               Conread position:12-289
               
               
               Cow position:chr22:11641089-11641368 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):74, 81

               
               
               Conread position:12-289
               
               
               Cow position:chr22:11641173-11641452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):266, 261

               
               
               Conread position:12-290
               
               
               Cow position:chr22:11640753-11641031 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):99, 93

               
               
               Conread position:12-290
               
               
               Cow position:chr22:11640837-11641115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr22:11701332-11701610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:178
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr22:12385437-12385157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):30, 70

               
               
               Conread position:12-290
               
               
               Cow position:chr22:12385605-12385325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):135, 152

               
               
               Conread position:12-290
               
               
               Cow position:chr22:12399109-12398831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:192
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr22:12458377-12458099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:194
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-302
               
               
               Cow position:chr22:12385183-12384892 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):282, 0

               
               
               Conread position:13-271
               
               
               Cow position:chr22:12431676-12431418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):246, 230

               
               
               Conread position:13-290
               
               
               Cow position:chr22:12399276-12398999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:187
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):63, 76

               
               
               Conread position:13-290
               
               
               Cow position:chr22:12399780-12399503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr22:12431088-12430811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:198
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):138, 151

               
               
               Conread position:13-290
               
               
               Cow position:chr22:12431844-12431567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr22:12432264-12431987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):138, 149

               
               
               Conread position:13-290
               
               
               Cow position:chr22:12475989-12475712 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr22:12499270-12499547 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr22:12432432-12432143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr22:12458292-12458003 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr22:12498850-12499139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:194
               
               
               Alignm E-value:7e-36
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-301
               
               
               Cow position:chr22:11641006-11641296 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):263, 0

               
               
               Conread position:13-304
               
               
               Cow position:chr22:12385688-12385393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:195
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):218, 239

               
               
               Conread position:13-304
               
               
               Cow position:chr22:12399444-12399151 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:202
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:13-304
               
               
               Cow position:chr22:12458124-12457831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:205
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):77, 66

               
               
               Conread position:13-324
               
               
               Cow position:chr22:12475821-12475511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:215
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):291, 279

               
               
               Conread position:14-241
               
               
               Cow position:chr22:12419315-12419088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:14-300
               
               
               Cow position:chr22:12458627-12458339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):268, 0

               
               
               Conread position:22-245
               
               
               Cow position:chr22:14429803-14430026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:149
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:22-300
               
               
               Cow position:chr22:46654002-46654282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):231, 222

               
               
               Conread position:25-288
               
               
               Cow position:chr22:12432336-12432073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:178
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):48, 55

               
               
               Conread position:27-324
               
               
               Cow position:chr22:12399928-12399638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:191
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):255, 89

               
               
               Conread position:28-290
               
               
               Cow position:chr22:12431915-12431651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:30-300
               
               
               Cow position:chr22:12432499-12432227 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:170
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):246, 0

               
               
               Conread position:37-290
               
               
               Cow position:chr22:12419023-12418770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:181
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:58-290
               
               
               Cow position:chr22:12399819-12399587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:163
               
               
               Alignm E-value:6e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:98-290
               
               
               Cow position:chr22:12419315-12419123 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-290
               
               
               Cow position:chr23:24547194-24546905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:198
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-208
               
               
               Cow position:chr23:24654172-24654376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-247
               
               
               Cow position:chr23:24560331-24560089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):226, 188

               
               
               Conread position:4-248
               
               
               Cow position:chr23:25660290-25660534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:163
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):86, 73

               
               
               Conread position:4-273
               
               
               Cow position:chr23:25698349-25698080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):26, 39

               
               
               Conread position:4-288
               
               
               Cow position:chr23:24535738-24535452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-289
               
               
               Cow position:chr23:24560583-24560298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:204
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr23:24522513-24522227 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):164, 146

               
               
               Conread position:4-290
               
               
               Cow position:chr23:24522597-24522311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:181
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):26, 32

               
               
               Conread position:4-290
               
               
               Cow position:chr23:24547107-24546821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:198
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr23:24560415-24560129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr23:24639355-24639641 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr23:25626754-25627040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):82, 72

               
               
               Conread position:4-290
               
               
               Cow position:chr23:25660206-25660492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):185, 180

               
               
               Conread position:4-290
               
               
               Cow position:chr23:25724072-25723786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-293
               
               
               Cow position:chr23:24639271-24639562 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr23:24560499-24560201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr23:25626586-25626884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:202
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):157, 148

               
               
               Conread position:4-304
               
               
               Cow position:chr23:24626363-24626665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:211
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):151, 145

               
               
               Conread position:8-280
               
               
               Cow position:chr23:25698681-25698409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:8-292
               
               
               Cow position:chr23:25626005-25626290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:183
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):281, 0

               
               
               Conread position:11-224
               
               
               Cow position:chr23:24626538-24626749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):143, 135

               
               
               Conread position:11-302
               
               
               Cow position:chr23:24560660-24560367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:205
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):265, 0

               
               
               Conread position:12-274
               
               
               Cow position:chr23:25660466-25660728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr23:24639447-24639725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-240
               
               
               Cow position:chr23:24535813-24535586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:155
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-243
               
               
               Cow position:chr23:24522420-24522190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:158
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-243
               
               
               Cow position:chr23:24546930-24546700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-279
               
               
               Cow position:chr23:25723979-25723713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-280
               
               
               Cow position:chr23:25698592-25698325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:173
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-286
               
               
               Cow position:chr23:25626679-25626952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr23:24639616-24639890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:191
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr23:25626094-25626372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):263, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr23:24535897-24535620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr23:24547014-24546737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr23:24547266-24546989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr23:24639700-24639977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr23:25626346-25626620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):175, 200

               
               
               Conread position:13-291
               
               
               Cow position:chr23:24626456-24626734 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:195
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr23:24639532-24639821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:192
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr23:24639784-24640073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):272, 0

               
               
               Conread position:13-324
               
               
               Cow position:chr23:25626262-25626572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):258, 265

               
               
               Conread position:16-287
               
               
               Cow position:chr23:25660385-25660657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:18-278
               
               
               Cow position:chr23:24654102-24654362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):233, 226

               
               
               Conread position:18-290
               
               
               Cow position:chr23:24535976-24535704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):73, 80

               
               
               Conread position:21-233
               
               
               Cow position:chr23:25626186-25626398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:24-280
               
               
               Cow position:chr23:24521986-24521730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):216, 5

               
               
               Conread position:28-304
               
               
               Cow position:chr23:24626303-24626581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):251, 0

               
               
               Conread position:35-290
               
               
               Cow position:chr23:24654034-24654290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:43-290
               
               
               Cow position:chr23:24547320-24547073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):36, 21

               
               
               Conread position:49-290
               
               
               Cow position:chr23:25724111-25723870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):30, 15

               
               
               Conread position:56-290
               
               
               Cow position:chr23:24560699-24560465 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:163
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:56-300
               
               
               Cow position:chr23:25660174-25660420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):207, 0

               
               
               Conread position:112-325
               
               
               Cow position:chr23:24536050-24535838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):171, 0

               
               
               Conread position:4-208
               
               
               Cow position:chr24:17070849-17071053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-287
               
               
               Cow position:chr24:17077955-17077672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:199
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-289
               
               
               Cow position:chr24:17078123-17077838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:197
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr24:17035652-17035366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:189
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr24:17036072-17035786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr24:17078039-17077753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-293
               
               
               Cow position:chr24:17035484-17035193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:192
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):272, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr24:17035400-17035102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):288, 0

               
               
               Conread position:4-307
               
               
               Cow position:chr24:17035904-17035599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:210
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-321
               
               
               Cow position:chr24:17013218-17013536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:217
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):284, 0

               
               
               Conread position:11-290
               
               
               Cow position:chr24:17036485-17036206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-280
               
               
               Cow position:chr24:17070773-17071041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):77, 73

               
               
               Conread position:12-290
               
               
               Cow position:chr24:17035308-17035030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr24:17036565-17036290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:12-304
               
               
               Cow position:chr24:17070689-17070983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:204
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):162, 140

               
               
               Conread position:13-209
               
               
               Cow position:chr24:17035223-17035027 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-280
               
               
               Cow position:chr24:17077778-17077511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr24:17035979-17035701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:189
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):152, 147

               
               
               Conread position:13-290
               
               
               Cow position:chr24:17035727-17035450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr24:17035811-17035534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr24:17036147-17035870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr24:17036231-17035954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr24:17070438-17070715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr24:17070606-17070883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):142, 136

               
               
               Conread position:13-300
               
               
               Cow position:chr24:17035559-17035270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:188
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):146, 137

               
               
               Conread position:13-301
               
               
               Cow position:chr24:17036399-17036109 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-318
               
               
               Cow position:chr24:17070522-17070826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):291, 279

               
               
               Conread position:116-290
               
               
               Cow position:chr24:16986428-16986602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:123
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):135, 130

               
               
               Conread position:1-286
               
               
               Cow position:chr25:33299034-33299319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-290
               
               
               Cow position:chr25:33157086-33156797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-302
               
               
               Cow position:chr25:33298698-33299001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):72, 78

               
               
               Conread position:1-304
               
               
               Cow position:chr25:33157170-33156865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:202
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):275, 0

               
               
               Conread position:4-196
               
               
               Cow position:chr25:33299625-33299817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-240
               
               
               Cow position:chr25:33299121-33299357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-247
               
               
               Cow position:chr25:34447580-34447815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):69, 75

               
               
               Conread position:4-278
               
               
               Cow position:chr25:326551-326825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-281
               
               
               Cow position:chr25:23420605-23420882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-282
               
               
               Cow position:chr25:34732050-34731772 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):60, 83

               
               
               Conread position:4-287
               
               
               Cow position:chr25:346502-346785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:191
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):132, 138

               
               
               Conread position:4-287
               
               
               Cow position:chr25:33127940-33128223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:195
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):163, 141

               
               
               Conread position:4-288
               
               
               Cow position:chr25:33144903-33145186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):264, 135

               
               
               Conread position:4-290
               
               
               Cow position:chr25:23420353-23420639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:194
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33157251-33156965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33157419-33157133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:201
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33157503-33157217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33298533-33298819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:202
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):50, 55

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33298785-33299071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:195
               
               
               Alignm E-value:8.99999e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33298869-33299155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33298953-33299239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33299289-33299575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:186
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):69, 76

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33299457-33299743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:198
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:33305744-33305461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):257, 24

               
               
               Conread position:4-290
               
               
               Cow position:chr25:34447328-34447614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):175, 149

               
               
               Conread position:4-290
               
               
               Cow position:chr25:34732470-34732182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):161, 153

               
               
               Conread position:4-290
               
               
               Cow position:chr25:36800853-36801139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:194
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr25:36800937-36801223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-292
               
               
               Cow position:chr25:326977-327266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):49, 59

               
               
               Conread position:4-294
               
               
               Cow position:chr25:36801681-36801971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:195
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-307
               
               
               Cow position:chr25:34769650-34769345 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:210
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-308
               
               
               Cow position:chr25:33305181-33304879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:210
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):139, 64

               
               
               Conread position:5-289
               
               
               Cow position:chr25:36800686-36800970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:5-290
               
               
               Cow position:chr25:36801430-36801715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):93, 89

               
               
               Conread position:5-329
               
               
               Cow position:chr25:33305909-33305589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):280, 91

               
               
               Conread position:6-290
               
               
               Cow position:chr25:36801515-36801799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:6-300
               
               
               Cow position:chr25:33305346-33305055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):276, 29

               
               
               Conread position:7-289
               
               
               Cow position:chr25:23420524-23420808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:204
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:11-290
               
               
               Cow position:chr25:33127863-33128142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:193
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-278
               
               
               Cow position:chr25:366787-367053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:177
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr25:34769978-34769700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:188
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-300
               
               
               Cow position:chr25:34447000-34447290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):264, 0

               
               
               Conread position:12-300
               
               
               Cow position:chr25:34769810-34769520 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:199
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):270, 0

               
               
               Conread position:12-301
               
               
               Cow position:chr25:25652250-25652541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):63, 68

               
               
               Conread position:12-302
               
               
               Cow position:chr25:36800525-36800817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):268, 0

               
               
               Conread position:12-304
               
               
               Cow position:chr25:33305422-33305131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:208
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):61, 16

               
               
               Conread position:12-304
               
               
               Cow position:chr25:34447084-34447378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:200
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):270, 0

               
               
               Conread position:12-306
               
               
               Cow position:chr25:34713844-34714140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):22, 26

               
               
               Conread position:13-229
               
               
               Cow position:chr25:22235976-22236192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-230
               
               
               Cow position:chr25:34763225-34763442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:146
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-241
               
               
               Cow position:chr25:36801030-36801258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:156
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):145, 152

               
               
               Conread position:13-243
               
               
               Cow position:chr25:34769473-34769243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:158
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-262
               
               
               Cow position:chr25:33306318-33306075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:13-280
               
               
               Cow position:chr25:34714265-34714532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):161, 168

               
               
               Conread position:13-287
               
               
               Cow position:chr25:33298626-33298900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:186
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr25:33306068-33305795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):85, 123

               
               
               Conread position:13-287
               
               
               Cow position:chr25:34714181-34714455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:173
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):243, 252

               
               
               Conread position:13-289
               
               
               Cow position:chr25:34447253-34447529 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:192
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):144, 138

               
               
               Conread position:13-289
               
               
               Cow position:chr25:34769557-34769279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr25:33127781-33128058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr25:33299214-33299491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):85, 80

               
               
               Conread position:13-290
               
               
               Cow position:chr25:34769725-34769448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr25:34770145-34769868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):37, 24

               
               
               Conread position:13-290
               
               
               Cow position:chr25:36801606-36801883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):60, 66

               
               
               Conread position:13-294
               
               
               Cow position:chr25:33299550-33299831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:194
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):60, 67

               
               
               Conread position:13-300
               
               
               Cow position:chr25:23420446-23420735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:198
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr25:33299382-33299671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:200
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):60, 66

               
               
               Conread position:13-304
               
               
               Cow position:chr25:34447421-34447712 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):83, 73

               
               
               Conread position:13-304
               
               
               Cow position:chr25:34769893-34769600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:17-290
               
               
               Cow position:chr25:346431-346704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):25, 16

               
               
               Conread position:18-243
               
               
               Cow position:chr25:18642103-18641875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):37, 75

               
               
               Conread position:21-221
               
               
               Cow position:chr25:34762900-34763100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:21-287
               
               
               Cow position:chr25:33145169-33145435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:25-288
               
               
               Cow position:chr25:33298470-33298735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):257, 0

               
               
               Conread position:26-233
               
               
               Cow position:chr25:414703-414497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:141
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:29-242
               
               
               Cow position:chr25:346610-346824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:147
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):15, 70

               
               
               Conread position:35-287
               
               
               Cow position:chr25:34446939-34447191 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:35-300
               
               
               Cow position:chr25:33306377-33306119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:177
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):247, 35

               
               
               Conread position:36-290
               
               
               Cow position:chr25:36800633-36800887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:179
               
               
               Alignm E-value:8.99999e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:41-290
               
               
               Cow position:chr25:33145024-33145270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):206, 11

               
               
               Conread position:47-290
               
               
               Cow position:chr25:414761-414524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:161
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:48-287
               
               
               Cow position:chr25:33144863-33145099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:154
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):174, 0

               
               
               Conread position:58-290
               
               
               Cow position:chr25:22235853-22236085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:58-290
               
               
               Cow position:chr25:33145122-33145354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:62-290
               
               
               Cow position:chr25:23420327-23420555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:163
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:91-290
               
               
               Cow position:chr25:34770151-34769952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:135
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:139-290
               
               
               Cow position:chr25:23420320-23420471 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:108
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-302
               
               
               Cow position:chr27:21615885-21615585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):275, 0

               
               
               Conread position:4-327
               
               
               Cow position:chr27:21615717-21615396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:215
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):288, 154

               
               
               Conread position:13-298
               
               
               Cow position:chr27:21615959-21615673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):58, 12

               
               
               Conread position:1-221
               
               
               Cow position:chr28:7810726-7810946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-288
               
               
               Cow position:chr28:7810483-7810763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:193
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):167, 51

               
               
               Conread position:2-289
               
               
               Cow position:chr28:7758544-7758832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):252, 235

               
               
               Conread position:2-290
               
               
               Cow position:chr28:9290140-9290423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:193
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:3-233
               
               
               Cow position:chr28:9298954-9299182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:3-288
               
               
               Cow position:chr28:7757973-7758260 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:196
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):276, 0

               
               
               Conread position:3-290
               
               
               Cow position:chr28:7758461-7758748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:200
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-210
               
               
               Cow position:chr28:9253409-9253615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:151
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-259
               
               
               Cow position:chr28:33210366-33210622 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):60, 76

               
               
               Conread position:4-274
               
               
               Cow position:chr28:7757722-7757992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:187
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-280
               
               
               Cow position:chr28:7758058-7758334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:190
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-288
               
               
               Cow position:chr28:9298704-9298989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:207
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):69, 75

               
               
               Conread position:4-289
               
               
               Cow position:chr28:9253241-9253528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-289
               
               
               Cow position:chr28:9253325-9253612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):272, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr28:7757470-7757756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:198
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr28:7757638-7757924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):66, 75

               
               
               Conread position:4-290
               
               
               Cow position:chr28:7757806-7758092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr28:7810402-7810679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):248, 126

               
               
               Conread position:4-300
               
               
               Cow position:chr28:7757554-7757852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):275, 0

               
               
               Conread position:4-328
               
               
               Cow position:chr28:7810561-7810883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):276, 299

               
               
               Conread position:4-328
               
               
               Cow position:chr28:9253073-9253397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:241
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):278, 299

               
               
               Conread position:5-290
               
               
               Cow position:chr28:11333662-11333383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:183
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):194, 0

               
               
               Conread position:7-290
               
               
               Cow position:chr28:9298874-9299155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:180
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):120, 0

               
               
               Conread position:9-240
               
               
               Cow position:chr28:9290477-9290708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:158
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:9-288
               
               
               Cow position:chr28:11333910-11333629 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):260, 0

               
               
               Conread position:10-208
               
               
               Cow position:chr28:9299365-9299563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):63, 69

               
               
               Conread position:12-290
               
               
               Cow position:chr28:7757394-7757672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:198
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):109, 122

               
               
               Conread position:13-287
               
               
               Cow position:chr28:9290067-9290337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):39, 56

               
               
               Conread position:13-288
               
               
               Cow position:chr28:7758387-7758664 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):262, 0

               
               
               Conread position:13-288
               
               
               Cow position:chr28:7810327-7810595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:201
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):259, 198

               
               
               Conread position:13-289
               
               
               Cow position:chr28:34673502-34673780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:182
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):63, 74

               
               
               Conread position:13-290
               
               
               Cow position:chr28:9252913-9253191 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr28:33210291-33210569 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:185
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):52, 66

               
               
               Conread position:13-298
               
               
               Cow position:chr28:9299284-9299571 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:196
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):267, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr28:7757899-7758188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):60, 66

               
               
               Conread position:13-300
               
               
               Cow position:chr28:7810252-7810532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:207
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):62, 39

               
               
               Conread position:13-300
               
               
               Cow position:chr28:9253166-9253455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-306
               
               
               Cow position:chr28:11333990-11333695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:13-329
               
               
               Cow position:chr28:9298797-9299112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:207
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):269, 22

               
               
               Conread position:14-300
               
               
               Cow position:chr28:11334073-11333785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:191
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):53, 68

               
               
               Conread position:15-299
               
               
               Cow position:chr28:9290400-9290685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):264, 64

               
               
               Conread position:15-300
               
               
               Cow position:chr28:7810656-7810943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:200
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):64, 53

               
               
               Conread position:17-301
               
               
               Cow position:chr28:34695811-34696097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:179
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):177, 167

               
               
               Conread position:24-287
               
               
               Cow position:chr28:34696322-34696585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):75, 70

               
               
               Conread position:28-304
               
               
               Cow position:chr28:9298561-9298837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):40, 105

               
               
               Conread position:29-300
               
               
               Cow position:chr28:9253014-9253287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:194
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):253, 0

               
               
               Conread position:31-289
               
               
               Cow position:chr28:9299218-9299478 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):249, 0

               
               
               Conread position:35-325
               
               
               Cow position:chr28:7758325-7758614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):247, 268

               
               
               Conread position:36-304
               
               
               Cow position:chr28:7757334-7757604 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):238, 0

               
               
               Conread position:37-290
               
               
               Cow position:chr28:33210231-33210484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):66, 73

               
               
               Conread position:115-290
               
               
               Cow position:chr28:9299218-9299393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:121
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr29:39627205-39626907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):281, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr29:39627277-39627003 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:173
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:21-292
               
               
               Cow position:chr29:39627104-39626832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:182
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):261, 0

               
               
               Conread position:4-247
               
               
               Cow position:chr3:68027482-68027725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-280
               
               
               Cow position:chr3:62721851-62721575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:181
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr3:62722271-62721985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr3:68045655-68045941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):45, 37

               
               
               Conread position:4-290
               
               
               Cow position:chr3:68045991-68046277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:182
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-291
               
               
               Cow position:chr3:62722103-62721816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:197
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr3:62742665-62742962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:205
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):219, 81

               
               
               Conread position:4-304
               
               
               Cow position:chr3:62722187-62721885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:207
               
               
               Alignm E-value:6.99949e-42
               
               
               Alignm gaps (pig, cow):288, 0

               
               
               Conread position:4-352
               
               
               Cow position:chr3:62743146-62743497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:219
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):309, 300

               
               
               Conread position:7-331
               
               
               Cow position:chr3:77350942-77350619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:210
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):12, 72

               
               
               Conread position:8-197
               
               
               Cow position:chr3:62721763-62721574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:129
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr3:62721927-62721649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-300
               
               
               Cow position:chr3:68045831-68046121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):70, 78

               
               
               Conread position:12-302
               
               
               Cow position:chr3:68045915-68046207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:187
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):270, 0

               
               
               Conread position:12-307
               
               
               Cow position:chr3:68027322-68027619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:185
               
               
               Alignm E-value:7e-21
               
               
               Alignm gaps (pig, cow):18, 24

               
               
               Conread position:13-210
               
               
               Cow position:chr3:62742840-62743033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):44, 157

               
               
               Conread position:13-233
               
               
               Cow position:chr3:62742756-62742977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:158
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):128, 139

               
               
               Conread position:13-274
               
               
               Cow position:chr3:77350849-77350591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):244, 161

               
               
               Conread position:13-278
               
               
               Cow position:chr3:68027155-68027420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr3:68046084-68046358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):62, 72

               
               
               Conread position:13-290
               
               
               Cow position:chr3:62722010-62721733 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:182
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):146, 139

               
               
               Conread position:13-290
               
               
               Cow position:chr3:62743076-62743348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:181
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr3:68027407-68027684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-302
               
               
               Cow position:chr3:62742425-62742713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:183
               
               
               Alignm E-value:7e-21
               
               
               Alignm gaps (pig, cow):269, 216

               
               
               Conread position:13-325
               
               
               Cow position:chr3:68045748-68046059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):291, 278

               
               
               Conread position:13-335
               
               
               Cow position:chr3:62742258-62742579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:200
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):291, 95

               
               
               Conread position:18-302
               
               
               Cow position:chr3:68027076-68027362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:187
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):31, 23

               
               
               Conread position:21-300
               
               
               Cow position:chr3:68027247-68027528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):55, 68

               
               
               Conread position:23-300
               
               
               Cow position:chr3:68045592-68045869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):64, 7

               
               
               Conread position:36-304
               
               
               Cow position:chr3:62722323-62722053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):256, 0

               
               
               Conread position:52-290
               
               
               Cow position:chr3:62743031-62743264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:161
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:4-293
               
               
               Cow position:chr5:34281395-34281681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:196
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):69, 149

               
               
               Conread position:3-290
               
               
               Cow position:chr6:49340793-49341080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:198
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-242
               
               
               Cow position:chr6:49341214-49341451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):228, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr6:49396347-49396645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):283, 0

               
               
               Conread position:9-290
               
               
               Cow position:chr6:49340631-49340912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:199
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):245, 238

               
               
               Conread position:9-290
               
               
               Cow position:chr6:49341135-49341416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:196
               
               
               Alignm E-value:7.00649e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:11-290
               
               
               Cow position:chr6:49341053-49341332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:199
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):78, 69

               
               
               Conread position:13-287
               
               
               Cow position:chr6:49396194-49396462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:190
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):245, 34

               
               
               Conread position:13-290
               
               
               Cow position:chr6:49340385-49340660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:198
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr6:49340467-49340744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:198
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr6:49340551-49340828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:196
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):76, 71

               
               
               Conread position:13-290
               
               
               Cow position:chr6:49340719-49340996 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:195
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):152, 160

               
               
               Conread position:13-290
               
               
               Cow position:chr6:49340887-49341164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr6:49340971-49341248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:196
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr6:49396692-49396969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:183
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):78, 85

               
               
               Conread position:13-300
               
               
               Cow position:chr6:49396608-49396897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:179
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:15-290
               
               
               Cow position:chr6:49396112-49396381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):39, 44

               
               
               Conread position:97-283
               
               
               Cow position:chr6:49362642-49362828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-239
               
               
               Cow position:chr7:1440025-1440263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):159, 150

               
               
               Conread position:1-243
               
               
               Cow position:chr7:18390297-18390539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-290
               
               
               Cow position:chr7:1014990-1015279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):256, 246

               
               
               Conread position:2-240
               
               
               Cow position:chr7:3180589-3180825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):208, 0

               
               
               Conread position:2-290
               
               
               Cow position:chr7:18390130-18390418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:188
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:3-293
               
               
               Cow position:chr7:42878719-42878427 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):279, 0

               
               
               Conread position:3-302
               
               
               Cow position:chr7:42878887-42878586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:216
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):144, 151

               
               
               Conread position:4-244
               
               
               Cow position:chr7:3180255-3180495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):158, 147

               
               
               Conread position:4-259
               
               
               Cow position:chr7:1438471-1438726 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:166
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):158, 149

               
               
               Conread position:4-278
               
               
               Cow position:chr7:42878550-42878276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:189
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):69, 76

               
               
               Conread position:4-281
               
               
               Cow position:chr7:1439524-1439803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):170, 75

               
               
               Conread position:4-288
               
               
               Cow position:chr7:11601133-11600847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):275, 0

               
               
               Conread position:4-288
               
               
               Cow position:chr7:18390216-18390502 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-289
               
               
               Cow position:chr7:42878634-42878349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):157, 147

               
               
               Conread position:4-290
               
               
               Cow position:chr7:1015077-1015363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr7:11600797-11600511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr7:11601049-11600763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr7:42878802-42878516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr7:42879138-42878852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):69, 76

               
               
               Conread position:4-290
               
               
               Cow position:chr7:42879222-42878936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:200
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-300
               
               
               Cow position:chr7:42878970-42878672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:210
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):227, 233

               
               
               Conread position:4-305
               
               
               Cow position:chr7:1439695-1439995 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):86, 66

               
               
               Conread position:4-313
               
               
               Cow position:chr7:1438387-1438699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:206
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):64, 75

               
               
               Conread position:4-325
               
               
               Cow position:chr7:3179919-3180239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:216
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):285, 298

               
               
               Conread position:11-290
               
               
               Cow position:chr7:11600958-11600679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:178
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):104, 121

               
               
               Conread position:11-298
               
               
               Cow position:chr7:18390475-18390764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:192
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):271, 0

               
               
               Conread position:12-244
               
               
               Cow position:chr7:8324963-8325195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):84, 70

               
               
               Conread position:12-290
               
               
               Cow position:chr7:3180095-3180373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:197
               
               
               Alignm E-value:7.00649e-43
               
               
               Alignm gaps (pig, cow):245, 235

               
               
               Conread position:12-306
               
               
               Cow position:chr7:11600705-11600414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:186
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):274, 0

               
               
               Conread position:13-246
               
               
               Cow position:chr7:8277911-8278144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:155
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):64, 85

               
               
               Conread position:13-246
               
               
               Cow position:chr7:11434508-11434275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):74, 85

               
               
               Conread position:13-278
               
               
               Cow position:chr7:1014336-1014601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-287
               
               
               Cow position:chr7:1015170-1015444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:181
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr7:1014834-1015110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):244, 234

               
               
               Conread position:13-290
               
               
               Cow position:chr7:3179760-3180037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:188
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr7:3180012-3180289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:196
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):145, 151

               
               
               Conread position:13-290
               
               
               Cow position:chr7:3180348-3180625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:183
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):244, 234

               
               
               Conread position:13-290
               
               
               Cow position:chr7:3180516-3180793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr7:8277659-8277936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:173
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr7:8325804-8326081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):78, 85

               
               
               Conread position:13-290
               
               
               Cow position:chr7:18390393-18390670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-293
               
               
               Cow position:chr7:1014918-1015200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:197
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-302
               
               
               Cow position:chr7:1014750-1015041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:200
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-327
               
               
               Cow position:chr7:1439954-1440266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:207
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):71, 22

               
               
               Conread position:13-330
               
               
               Cow position:chr7:1438312-1438629 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:196
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):61, 67

               
               
               Conread position:14-304
               
               
               Cow position:chr7:42879296-42879004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:205
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:15-290
               
               
               Cow position:chr7:1014668-1014943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:15-290
               
               
               Cow position:chr7:1439451-1439729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):243, 136

               
               
               Conread position:17-290
               
               
               Cow position:chr7:11601204-11600931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:17-306
               
               
               Cow position:chr7:11600868-11600577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):265, 0

               
               
               Conread position:19-290
               
               
               Cow position:chr7:1014510-1014775 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):133, 0

               
               
               Conread position:25-240
               
               
               Cow position:chr7:18390573-18390788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:143
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:25-244
               
               
               Cow position:chr7:8325312-8325531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):62, 73

               
               
               Conread position:25-246
               
               
               Cow position:chr7:8278175-8278396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:152
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):51, 73

               
               
               Conread position:25-290
               
               
               Cow position:chr7:8324892-8325157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:174
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):73, 51

               
               
               Conread position:26-287
               
               
               Cow position:chr7:8243798-8244057 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):71, 52

               
               
               Conread position:37-290
               
               
               Cow position:chr7:8324820-8325073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):48, 39

               
               
               Conread position:43-300
               
               
               Cow position:chr7:8325750-8326009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:174
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):37, 54

               
               
               Conread position:58-287
               
               
               Cow position:chr7:3179721-3179950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:62-300
               
               
               Cow position:chr7:42879333-42879092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):12, 65

               
               
               Conread position:1-287
               
               
               Cow position:chr8:46816096-46816382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-300
               
               
               Cow position:chr8:46816600-46816901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:205
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):281, 0

               
               
               Conread position:1-301
               
               
               Cow position:chr8:45200817-45201119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):50, 58

               
               
               Conread position:1-304
               
               
               Cow position:chr8:46817020-46817325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:214
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):251, 241

               
               
               Conread position:1-313
               
               
               Cow position:chr8:6958029-6957716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:199
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):163, 150

               
               
               Conread position:2-290
               
               
               Cow position:chr8:55580874-55581162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:198
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:3-290
               
               
               Cow position:chr8:45201491-45201778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:3-293
               
               
               Cow position:chr8:46816266-46816557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):286, 0

               
               
               Conread position:4-224
               
               
               Cow position:chr8:48406988-48406768 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):72, 83

               
               
               Conread position:4-288
               
               
               Cow position:chr8:46816015-46816301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:201
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-289
               
               
               Cow position:chr8:48407240-48406955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr8:45201240-45201526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:199
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr8:46816351-46816637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:202
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr8:46816519-46816805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:198
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr8:48406568-48406280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):276, 0

               
               
               Conread position:4-290
               
               
               Cow position:chr8:48406904-48406618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):191, 184

               
               
               Conread position:4-290
               
               
               Cow position:chr8:55581044-55581330 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-304
               
               
               Cow position:chr8:46816435-46816737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:203
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-312
               
               
               Cow position:chr8:46816939-46817246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):74, 70

               
               
               Conread position:6-287
               
               
               Cow position:chr8:48407658-48407377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:6-325
               
               
               Cow position:chr8:45200906-45201223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:211
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):276, 297

               
               
               Conread position:10-290
               
               
               Cow position:chr8:45201582-45201862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:201
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-290
               
               
               Cow position:chr8:55581136-55581414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:182
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:12-325
               
               
               Cow position:chr8:45200996-45201307 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):267, 291

               
               
               Conread position:13-276
               
               
               Cow position:chr8:46817116-46817379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:187
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):217, 239

               
               
               Conread position:13-284
               
               
               Cow position:chr8:55581221-55581492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-285
               
               
               Cow position:chr8:55581389-55581661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:178
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-289
               
               
               Cow position:chr8:46816696-46816972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:197
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):77, 85

               
               
               Conread position:13-289
               
               
               Cow position:chr8:48407399-48407123 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:179
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr8:45201333-45201610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:195
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr8:48406643-48406366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr8:48407063-48406786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:187
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):238, 231

               
               
               Conread position:13-290
               
               
               Cow position:chr8:48407147-48406870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):71, 63

               
               
               Conread position:13-290
               
               
               Cow position:chr8:48407315-48407038 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):160, 148

               
               
               Conread position:13-290
               
               
               Cow position:chr8:48407483-48407206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:194
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-290
               
               
               Cow position:chr8:55581305-55581582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr8:45201081-45201370 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:205
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-300
               
               
               Cow position:chr8:45201165-45201454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:199
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:13-304
               
               
               Cow position:chr8:46816192-46816485 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-304
               
               
               Cow position:chr8:46816864-46817157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):155, 145

               
               
               Conread position:13-304
               
               
               Cow position:chr8:48407567-48407274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-325
               
               
               Cow position:chr8:45201417-45201727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):279, 0

               
               
               Conread position:13-331
               
               
               Cow position:chr8:45201669-45201985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):135, 140

               
               
               Conread position:16-290
               
               
               Cow position:chr8:46815940-46816217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):15, 67

               
               
               Conread position:25-290
               
               
               Cow position:chr8:46815865-46816133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:178
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):72, 66

               
               
               Conread position:28-290
               
               
               Cow position:chr8:55580982-55581246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:177
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:37-291
               
               
               Cow position:chr8:48406703-48406448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):245, 0

               
               
               Conread position:47-290
               
               
               Cow position:chr8:55580835-55581078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):206, 196

               
               
               Conread position:58-278
               
               
               Cow position:chr8:6958056-6957836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-213
               
               
               Cow position:chrX:29044873-29044661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:157
               
               
               Alignm E-value:9e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-290
               
               
               Cow position:chrX:25310025-25310314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-302
               
               
               Cow position:chrX:29045293-29044990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:211
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):291, 0

               
               
               Conread position:1-303
               
               
               Cow position:chrX:29045041-29044737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):281, 0

               
               
               Conread position:1-306
               
               
               Cow position:chrX:25324697-25324389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:216
               
               
               Alignm E-value:5.04467e-44
               
               
               Alignm gaps (pig, cow):6, 152

               
               
               Conread position:1-307
               
               
               Cow position:chrX:25324780-25324472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):275, 0

               
               
               Conread position:1-307
               
               
               Cow position:chrX:29045608-29045303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:200
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):178, 145

               
               
               Conread position:2-290
               
               
               Cow position:chrX:29044956-29044668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:3-300
               
               
               Cow position:chrX:25309943-25310242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:207
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):279, 0

               
               
               Conread position:4-280
               
               
               Cow position:chrX:25324441-25324169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):190, 0

               
               
               Conread position:4-290
               
               
               Cow position:chrX:25309860-25310146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chrX:25324861-25324575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chrX:25324945-25324659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chrX:25325029-25324743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chrX:25325281-25324995 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chrX:25325365-25325079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:207
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:4-290
               
               
               Cow position:chrX:25325533-25325247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):253, 241

               
               
               Conread position:4-300
               
               
               Cow position:chrX:25309776-25310074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):278, 0

               
               
               Conread position:4-304
               
               
               Cow position:chrX:29045122-29044820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):288, 0

               
               
               Conread position:4-324
               
               
               Cow position:chrX:25310112-25310431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:217
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):278, 299

               
               
               Conread position:7-300
               
               
               Cow position:chrX:25325866-25325571 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):63, 73

               
               
               Conread position:8-287
               
               
               Cow position:chrX:29045202-29044923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:197
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:9-280
               
               
               Cow position:chrX:29045684-29045413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:187
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):222, 244

               
               
               Conread position:9-290
               
               
               Cow position:chrX:25325696-25325415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:179
               
               
               Alignm E-value:8e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:9-302
               
               
               Cow position:chrX:25325108-25324813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):280, 0

               
               
               Conread position:13-290
               
               
               Cow position:chrX:25310205-25310482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:200
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):69, 74

               
               
               Conread position:13-302
               
               
               Cow position:chrX:25325188-25324897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-304
               
               
               Cow position:chrX:25324516-25324225 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:13-304
               
               
               Cow position:chrX:25325440-25325147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:204
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):155, 146

               
               
               Conread position:13-304
               
               
               Cow position:chrX:25325776-25325483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):269, 0

               
               
               Conread position:13-307
               
               
               Cow position:chrX:25310289-25310585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:207
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):253, 231

               
               
               Conread position:14-303
               
               
               Cow position:chrX:29045361-29045073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):268, 29

               
               
               Conread position:21-287
               
               
               Cow position:chrX:25309709-25309975 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:184
               
               
               Alignm E-value:9e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:21-293
               
               
               Cow position:chrX:29045756-29045482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:189
               
               
               Alignm E-value:8e-38
               
               
               Alignm gaps (pig, cow):261, 0

               
               
               Conread position:28-304
               
               
               Cow position:chrX:25325593-25325315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):261, 0

               
               
               Conread position:35-304
               
               
               Cow position:chrX:29045826-29045555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):116, 125

               
               
               Conread position:63-290
               
               
               Cow position:chrX:25309667-25309894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:167
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):10, 27