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Cow genome map

           
Conread name:
           
Ss1.1-rpfco0139_p3.5
        

               
Conread position:
               
115-291
               

               
Cow position:
               
chr10:21121223-21121049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
172, 72
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr10:40822467-40822642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
117-359
               

               
Cow position:
               
chr10:31045595-31045841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
118-283
               

               
Cow position:
               
chr10:44082065-44081895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
121-438
               

               
Cow position:
               
chr10:51845630-51845298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
123-434
               

               
Cow position:
               
chr10:22343398-22343068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 171
               

               
Conread position:
               
128-373
               

               
Cow position:
               
chr10:22835856-22836114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
133-282
               

               
Cow position:
               
chr10:49186567-49186722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr10:24124139-24124304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr10:64220525-64220696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 164
               

               
Conread position:
               
134-299
               

               
Cow position:
               
chr10:3520896-3521064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 115
               

               
Conread position:
               
161-458
               

               
Cow position:
               
chr10:33572874-33572570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr11:67155272-67155073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
115-305
               

               
Cow position:
               
chr11:29764000-29763815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
118-314
               

               
Cow position:
               
chr11:18884837-18884638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
67, 173
               

               
Conread position:
               
122-384
               

               
Cow position:
               
chr11:75711725-75711449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
123-299
               

               
Cow position:
               
chr11:46779289-46779468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
124-297
               

               
Cow position:
               
chr11:73468323-73468496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 144
               

               
Conread position:
               
125-278
               

               
Cow position:
               
chr11:2843257-2843098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
133-273
               

               
Cow position:
               
chr11:66607195-66607335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 103
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr11:3086462-3086627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
133-299
               

               
Cow position:
               
chr11:3262047-3261880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
133-435
               

               
Cow position:
               
chr11:34455389-34455076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
147-442
               

               
Cow position:
               
chr11:59038254-59038548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 131
               

               
Conread position:
               
126-283
               

               
Cow position:
               
chr12:32065724-32065569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
133-295
               

               
Cow position:
               
chr12:9400839-9401005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
99-427
               

               
Cow position:
               
chr13:39411516-39411860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
102-297
               

               
Cow position:
               
chr13:56024058-56023870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 8
               

               
Conread position:
               
118-283
               

               
Cow position:
               
chr13:61084561-61084394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
123-279
               

               
Cow position:
               
chr13:21603354-21603198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 104
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr13:33564330-33564498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 159
               

               
Conread position:
               
133-299
               

               
Cow position:
               
chr13:19128008-19128176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
94, 163
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr13:54106683-54106435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
87-290
               

               
Cow position:
               
chr14:20911465-20911257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 122
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr14:44690713-44690517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
118-435
               

               
Cow position:
               
chr14:48252806-48253145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
132-297
               

               
Cow position:
               
chr14:13256920-13256750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
86-434
               

               
Cow position:
               
chr15:1850943-1851295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
101-305
               

               
Cow position:
               
chr15:5641841-5642048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
126, 88
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr15:12021918-12021733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 75
               

               
Conread position:
               
115-297
               

               
Cow position:
               
chr15:4387279-4387093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
113, 179
               

               
Conread position:
               
133-283
               

               
Cow position:
               
chr15:26408476-26408630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
133-299
               

               
Cow position:
               
chr15:35844498-35844330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr15:52592081-52591905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
97, 158
               

               
Conread position:
               
133-373
               

               
Cow position:
               
chr15:37459388-37459134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
184-438
               

               
Cow position:
               
chr15:38637325-38637058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
85-299
               

               
Cow position:
               
chr16:27823046-27823259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
142, 48
               

               
Conread position:
               
115-434
               

               
Cow position:
               
chr16:1433364-1433016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
116-283
               

               
Cow position:
               
chr16:27298978-27299143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 53
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr16:41563544-41563373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
133-436
               

               
Cow position:
               
chr16:53092626-53092310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr17:1521078-1520881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
110-306
               

               
Cow position:
               
chr17:6261618-6261418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 184
               

               
Conread position:
               
115-299
               

               
Cow position:
               
chr17:15327035-15326845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
113, 160
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr17:11085976-11086159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 176
               

               
Conread position:
               
133-437
               

               
Cow position:
               
chr17:4168893-4168571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 162
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr18:37507922-37507739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
136-300
               

               
Cow position:
               
chr18:13892665-13892505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
100-298
               

               
Cow position:
               
chr19:5027066-5027266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
102-287
               

               
Cow position:
               
chr19:31272675-31272868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
118-342
               

               
Cow position:
               
chr19:40850504-40850735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 163
               

               
Conread position:
               
120-297
               

               
Cow position:
               
chr19:24063860-24063678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
160-437
               

               
Cow position:
               
chr19:31380024-31380315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 193
               

               
Conread position:
               
94-415
               

               
Cow position:
               
chr20:12687004-12687342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 159
               

               
Conread position:
               
117-297
               

               
Cow position:
               
chr20:25848907-25849088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 170
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr20:21916562-21916379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 172
               

               
Conread position:
               
122-275
               

               
Cow position:
               
chr20:33062262-33062419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr20:37582075-37581907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
133-302
               

               
Cow position:
               
chr20:5792192-5792020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 161
               

               
Conread position:
               
138-438
               

               
Cow position:
               
chr20:9993533-9993242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
71-288
               

               
Cow position:
               
chr21:11156739-11156953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
86-304
               

               
Cow position:
               
chr21:24308206-24308420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
122-297
               

               
Cow position:
               
chr21:3115637-3115459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr22:12435991-12435828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
135-299
               

               
Cow position:
               
chr23:7357082-7356913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 159
               

               
Conread position:
               
88-434
               

               
Cow position:
               
chr24:38288815-38289170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
117-436
               

               
Cow position:
               
chr24:6182321-6181988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
118-299
               

               
Cow position:
               
chr24:24074334-24074515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
167, 59
               

               
Conread position:
               
120-437
               

               
Cow position:
               
chr24:36860810-36860476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 197
               

               
Conread position:
               
121-434
               

               
Cow position:
               
chr24:29597577-29597265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
122-434
               

               
Cow position:
               
chr24:5943592-5943278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 77
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr25:28861521-28861339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
133-437
               

               
Cow position:
               
chr25:26732861-26732542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 230
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr25:2137308-2137060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr26:17326068-17325885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr26:30587447-30587630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 176
               

               
Conread position:
               
115-297
               

               
Cow position:
               
chr27:3233653-3233838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 178
               

               
Conread position:
               
115-300
               

               
Cow position:
               
chr27:25034556-25034741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
117-297
               

               
Cow position:
               
chr27:28893472-28893292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr27:12748904-12748721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr28:25092909-25093087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
118-298
               

               
Cow position:
               
chr28:17390314-17390130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
118-373
               

               
Cow position:
               
chr28:10471563-10471297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 223
               

               
Conread position:
               
118-434
               

               
Cow position:
               
chr28:17665416-17665744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
119-434
               

               
Cow position:
               
chr28:15034201-15034548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
122-426
               

               
Cow position:
               
chr28:29841716-29842017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr28:27957823-27957990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 160
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr29:2839466-2839648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
110, 175
               

               
Conread position:
               
124-314
               

               
Cow position:
               
chr29:22951306-22951500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
103, 170
               

               
Conread position:
               
133-291
               

               
Cow position:
               
chr29:15624865-15625026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
9-480
               

               
Cow position:
               
chr3:67518524-67519019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
88-283
               

               
Cow position:
               
chr3:56399065-56398869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
91-307
               

               
Cow position:
               
chr3:73530302-73530088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
113-458
               

               
Cow position:
               
chr3:12565650-12566005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr3:595917-595734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr3:30316338-30316154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr3:46504340-46504157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 172
               

               
Conread position:
               
121-334
               

               
Cow position:
               
chr3:2709082-2709302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 173
               

               
Conread position:
               
123-297
               

               
Cow position:
               
chr3:43191506-43191684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 171
               

               
Conread position:
               
123-438
               

               
Cow position:
               
chr3:65919170-65918848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
104, 83
               

               
Conread position:
               
124-296
               

               
Cow position:
               
chr3:58167457-58167284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 167
               

               
Conread position:
               
129-435
               

               
Cow position:
               
chr3:19806580-19806268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
99, 162
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr3:4736156-4736318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
133-299
               

               
Cow position:
               
chr3:69436684-69436853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
133-434
               

               
Cow position:
               
chr3:27920182-27919870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 204
               

               
Conread position:
               
134-296
               

               
Cow position:
               
chr3:22852748-22852912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
114-297
               

               
Cow position:
               
chr4:43413530-43413343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 180
               

               
Conread position:
               
115-299
               

               
Cow position:
               
chr4:57985588-57985399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 184
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr4:17924367-17924550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 172
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr4:25597892-25598077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
118-299
               

               
Cow position:
               
chr4:26876194-26876380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 177
               

               
Conread position:
               
118-437
               

               
Cow position:
               
chr4:41107614-41107930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
143, 111
               

               
Conread position:
               
121-298
               

               
Cow position:
               
chr4:12458989-12459163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 73
               

               
Conread position:
               
121-298
               

               
Cow position:
               
chr4:13266228-13266404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 93
               

               
Conread position:
               
121-303
               

               
Cow position:
               
chr4:41336180-41335991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
133-274
               

               
Cow position:
               
chr4:34359374-34359233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
121-297
               

               
Cow position:
               
chr5:20405736-20405558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
107, 85
               

               
Conread position:
               
121-307
               

               
Cow position:
               
chr5:5665902-5666088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-255
               

               
Cow position:
               
chr5:14344041-14344176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
132-290
               

               
Cow position:
               
chr5:21222051-21222211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
105-432
               

               
Cow position:
               
chr6:10060629-10060280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr6:5947940-5948178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
117-297
               

               
Cow position:
               
chr6:65843451-65843267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
112, 177
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr6:704046-703863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr6:30273059-30273242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
122-437
               

               
Cow position:
               
chr6:58005045-58004719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
184, 168
               

               
Conread position:
               
133-348
               

               
Cow position:
               
chr6:69144385-69144167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 188
               

               
Conread position:
               
112-296
               

               
Cow position:
               
chr7:27458799-27458987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 180
               

               
Conread position:
               
115-297
               

               
Cow position:
               
chr7:46747918-46747732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 175
               

               
Conread position:
               
117-414
               

               
Cow position:
               
chr7:45582052-45582365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
120-297
               

               
Cow position:
               
chr7:45916257-45916079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 150
               

               
Conread position:
               
133-342
               

               
Cow position:
               
chr7:34220938-34221146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
133-442
               

               
Cow position:
               
chr7:55475129-55475443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
88-410
               

               
Cow position:
               
chr8:36533164-36533504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
145, 44
               

               
Conread position:
               
114-297
               

               
Cow position:
               
chr8:51506736-51506920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
115-299
               

               
Cow position:
               
chr8:5778783-5778599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr8:49218853-49218668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
118-299
               

               
Cow position:
               
chr8:50995898-50995712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
118-435
               

               
Cow position:
               
chr8:17313144-17312818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
110, 172
               

               
Conread position:
               
126-297
               

               
Cow position:
               
chr8:34660755-34660583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 165
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr8:21585277-21585112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
94, 158
               

               
Conread position:
               
133-430
               

               
Cow position:
               
chr8:35543766-35543464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
137-437
               

               
Cow position:
               
chr8:52211517-52211217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
115-386
               

               
Cow position:
               
chr9:27691154-27691443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 180
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chr9:51180416-51180599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
124-299
               

               
Cow position:
               
chr9:4283715-4283537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 154
               

               
Conread position:
               
133-299
               

               
Cow position:
               
chr9:64027178-64027011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 144
               

               
Conread position:
               
133-434
               

               
Cow position:
               
chr9:44384996-44384679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 140
               

               
Conread position:
               
67-304
               

               
Cow position:
               
chrX:27325334-27325572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
70-334
               

               
Cow position:
               
chrX:23021011-23020743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
158, 11
               

               
Conread position:
               
115-435
               

               
Cow position:
               
chrX:23524687-23525036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 179
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chrX:12766921-12767253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 183
               

               
Conread position:
               
118-297
               

               
Cow position:
               
chrX:18952006-18952189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 176
               

               
Conread position:
               
133-435
               

               
Cow position:
               
chrX:15177780-15178111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
96, 323
               

               
Conread position:
               
133-437
               

               
Cow position:
               
chrX:18768695-18768380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 194
               

               
Conread position:
               
153-437
               

               
Cow position:
               
chrX:36010617-36010313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
167-436
               

               
Cow position:
               
chrX:6030313-6030583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
301-437
               

               
Cow position:
               
chrX:18841540-18841681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 0