Cow genome map

Conread name: Ss1.1-rpgl08_d5.5

Conread position: 68-427
Cow position: chr1:36225747-36225382 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 115

Conread position: 152-286
Cow position: chr1:94704183-94704052 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 475-802
Cow position: chr1:36225090-36224762 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 18

Conread position: 475-802
Cow position: chr1:36229542-36229214 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 18

Conread position: 40-349
Cow position: chr10:60788400-60788711 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 76

Conread position: 65-391
Cow position: chr10:3865790-3866094 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 374-609
Cow position: chr10:60788960-60789175 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 432-798
Cow position: chr10:3866708-3867066 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 89

Conread position: 473-797
Cow position: chr10:60789179-60789504 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 199
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 230, 94

Conread position: 509-776
Cow position: chr10:60788965-60788710 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 118, 64

Conread position: 130-371
Cow position: chr14:43348165-43348404 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 50

Conread position: 130-410
Cow position: chr15:30473172-30472895 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 152-286
Cow position: chr19:50858563-50858697 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 135
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 226-567
Cow position: chr19:30218279-30218605 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 49

Conread position: 283-365
Cow position: chr19:50862832-50862914 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 80
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 356-803
Cow position: chr19:50864970-50865413 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 176

Conread position: 615-795
Cow position: chr19:30218774-30218950 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 51-792
Cow position: chr2:85522741-85522017 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 659, 194

Conread position: 6-199
Cow position: chr24:19937678-19937493 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 57-739
Cow position: chr24:28734530-28735173 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 121

Conread position: 252-791
Cow position: chr24:19937479-19936936 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 280

Conread position: 34-198
Cow position: chr25:33966535-33966367 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 140
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 110, 0

Conread position: 674-802
Cow position: chr25:23589078-23588951 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 54

Conread position: 40-390
Cow position: chr27:3500187-3500530 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 27-260
Cow position: chr29:19835831-19836044 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 253-803
Cow position: chr29:19836328-19836874 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 103

Conread position: 620-799
Cow position: chr5:76095292-76095112 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 6-444
Cow position: chr6:6270757-6271186 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 36

Conread position: 435-802
Cow position: chr6:6271498-6271850 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 100

Conread position: 615-802
Cow position: chr6:12849383-12849199 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 145, 0