Cow genome map
| Conread name: | Ss1.1-rpigcb_0288.5 |
| Conread position: | 359-626 |
| Cow position: | chr1:45166762-45167034 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 297-636 |
| Cow position: | chr10:15435559-15435230 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 43 |
| Conread position: | 298-634 |
| Cow position: | chr11:62373783-62374112 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 299-634 |
| Cow position: | chr11:64366228-64365893 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 300-636 |
| Cow position: | chr11:20355457-20355137 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 353-636 |
| Cow position: | chr11:13855789-13856066 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 180, 85 |
| Conread position: | 369-628 |
| Cow position: | chr12:33479840-33480101 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 161, 16 |
| Conread position: | 347-636 |
| Cow position: | chr13:52083317-52083032 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 92 |
| Conread position: | 375-628 |
| Cow position: | chr13:62569388-62569644 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 152, 48 |
| Conread position: | 297-477 |
| Cow position: | chr14:13874359-13874534 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 143 |
| Conread position: | 297-547 |
| Cow position: | chr14:13214963-13215209 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 184, 39 |
| Conread position: | 297-635 |
| Cow position: | chr14:18210441-18210784 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 297-552 |
| Cow position: | chr15:22732842-22732599 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 297-636 |
| Cow position: | chr15:32688922-32689254 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 326-533 |
| Cow position: | chr17:4852485-4852700 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 283-636 |
| Cow position: | chr18:11753183-11753542 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 159 |
| Conread position: | 297-636 |
| Cow position: | chr18:34538180-34538510 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 292-636 |
| Cow position: | chr19:47874058-47873729 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 244, 48 |
| Conread position: | 394-636 |
| Cow position: | chr19:9530053-9529805 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 347-636 |
| Cow position: | chr2:69317858-69317566 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 180, 93 |
| Conread position: | 299-623 |
| Cow position: | chr21:44736907-44737235 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 306-523 |
| Cow position: | chr21:6034014-6033802 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 297-636 |
| Cow position: | chr24:24571217-24571551 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 441-636 |
| Cow position: | chr25:11866492-11866690 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 101, 79 |
| Conread position: | 317-547 |
| Cow position: | chr26:4088066-4087837 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 358-636 |
| Cow position: | chr26:12165002-12165273 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 297-636 |
| Cow position: | chr27:28168786-28168439 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 297-636 |
| Cow position: | chr29:32900373-32900719 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 121 |
| Conread position: | 297-545 |
| Cow position: | chr3:26808868-26808611 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 50, 152 |
| Conread position: | 297-636 |
| Cow position: | chr3:7818283-7818627 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 296-636 |
| Cow position: | chr4:27416860-27417221 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 296-619 |
| Cow position: | chr5:52019396-52019074 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 297-636 |
| Cow position: | chr7:25883821-25883467 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 125 |
| Conread position: | 297-636 |
| Cow position: | chr7:36871110-36871441 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 125 |
| Conread position: | 315-626 |
| Cow position: | chr8:19899011-19898692 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 297-478 |
| Cow position: | chr9:50032146-50032328 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 106 |
| Conread position: | 297-636 |
| Cow position: | chr9:42379273-42379611 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 94 |
| Conread position: | 315-636 |
| Cow position: | chr9:36714507-36714183 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 32, 18 |