Cow genome map

Conread name: Ss1.1-rpigcf0_007619.5

Conread position: 57-274
Cow position: chr1:38396754-38396962 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 80

Conread position: 58-292
Cow position: chr1:61737950-61737716 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 11

Conread position: 59-292
Cow position: chr1:44101204-44100959 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 15, 0

Conread position: 61-292
Cow position: chr1:98864568-98864332 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 91

Conread position: 140-292
Cow position: chr1:31421326-31421164 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 3-288
Cow position: chr10:11820908-11821190 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 42

Conread position: 47-284
Cow position: chr10:24977572-24977339 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 10

Conread position: 57-274
Cow position: chr10:64302572-64302347 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 96

Conread position: 57-288
Cow position: chr10:6260221-6259982 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 95

Conread position: 66-288
Cow position: chr10:39880153-39879944 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 55

Conread position: 47-288
Cow position: chr11:36713298-36713050 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 14

Conread position: 57-197
Cow position: chr11:44231326-44231472 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 57-278
Cow position: chr11:36762287-36762524 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 107

Conread position: 57-288
Cow position: chr11:13066851-13066616 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 72, 100

Conread position: 63-292
Cow position: chr11:18073202-18072955 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 17

Conread position: 106-292
Cow position: chr11:30187738-30187931 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 17, 69

Conread position: 57-261
Cow position: chr12:17976967-17977187 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 42

Conread position: 48-292
Cow position: chr13:31556837-31556577 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 9

Conread position: 57-168
Cow position: chr13:21131598-21131712 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 60-296
Cow position: chr13:22185337-22185096 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 63, 86

Conread position: 51-292
Cow position: chr14:9516056-9515807 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 5, 113

Conread position: 57-292
Cow position: chr14:33487709-33487956 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 207

Conread position: 69-254
Cow position: chr14:34043853-34043668 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 54, 79

Conread position: 81-292
Cow position: chr14:38816021-38815794 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 56-292
Cow position: chr15:30810772-30811013 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 67, 121

Conread position: 57-292
Cow position: chr15:20357131-20356885 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 66, 212

Conread position: 58-292
Cow position: chr15:498526-498771 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 94

Conread position: 83-269
Cow position: chr15:14633866-14634065 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 60

Conread position: 57-288
Cow position: chr16:41756894-41756652 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 66, 35

Conread position: 57-292
Cow position: chr16:28437982-28437727 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 190

Conread position: 107-292
Cow position: chr17:15384340-15384526 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 90, 7

Conread position: 57-205
Cow position: chr18:4884982-4884836 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 127
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 70, 89

Conread position: 42-292
Cow position: chr19:32182890-32182622 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 206

Conread position: 57-288
Cow position: chr2:77208703-77208949 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 41

Conread position: 57-292
Cow position: chr2:45919907-45919666 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 132, 69

Conread position: 57-292
Cow position: chr2:45968293-45968049 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 66, 183

Conread position: 57-292
Cow position: chr2:63977959-63978209 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 66, 102

Conread position: 66-292
Cow position: chr2:11692226-11692454 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 194

Conread position: 47-284
Cow position: chr21:37292848-37293096 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 102

Conread position: 57-292
Cow position: chr21:25975555-25975806 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 66, 43

Conread position: 80-292
Cow position: chr21:23602853-23603084 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 44-261
Cow position: chr22:36591341-36591115 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 8, 39

Conread position: 56-296
Cow position: chr22:36580687-36580440 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 43

Conread position: 57-254
Cow position: chr22:292356-292144 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 43

Conread position: 57-278
Cow position: chr22:297820-297596 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 93

Conread position: 57-292
Cow position: chr22:8875725-8875963 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 51

Conread position: 60-293
Cow position: chr22:36552328-36552093 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 39

Conread position: 47-296
Cow position: chr23:26836766-26837031 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 76, 10

Conread position: 57-209
Cow position: chr24:14872786-14872633 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 41

Conread position: 57-291
Cow position: chr24:6048791-6049037 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 133, 44

Conread position: 47-292
Cow position: chr28:5801135-5801400 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 10

Conread position: 51-292
Cow position: chr28:29436719-29436458 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 93

Conread position: 57-292
Cow position: chr28:10230061-10229816 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 66, 29

Conread position: 62-291
Cow position: chr28:14510140-14510368 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 30

Conread position: 57-292
Cow position: chr29:16016632-16016407 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 66

Conread position: 57-223
Cow position: chr3:64822016-64822182 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 96

Conread position: 57-270
Cow position: chr3:18728724-18728506 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 96

Conread position: 57-292
Cow position: chr3:31415574-31415828 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 17, 24

Conread position: 57-292
Cow position: chr3:70887173-70887425 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 15

Conread position: 58-283
Cow position: chr3:21304740-21304520 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 125, 64

Conread position: 57-265
Cow position: chr4:27295891-27295671 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 0

Conread position: 57-284
Cow position: chr4:44925683-44925431 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 22

Conread position: 57-287
Cow position: chr4:968791-968566 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 26

Conread position: 57-288
Cow position: chr4:4176664-4176881 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 66, 91

Conread position: 57-292
Cow position: chr4:1496533-1496296 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 66, 41

Conread position: 66-292
Cow position: chr4:54158509-54158741 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 22

Conread position: 78-284
Cow position: chr4:19251447-19251642 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 11

Conread position: 104-296
Cow position: chr4:19093320-19093519 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 91, 17

Conread position: 173-293
Cow position: chr4:54188142-54188260 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 42-211
Cow position: chr5:58055157-58054985 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 152

Conread position: 57-288
Cow position: chr5:41358139-41357906 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 51

Conread position: 47-273
Cow position: chr6:31637465-31637241 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 10

Conread position: 57-291
Cow position: chr6:35434225-35434462 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 97

Conread position: 59-218
Cow position: chr6:10631056-10631211 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 64, 26

Conread position: 125-278
Cow position: chr6:34025429-34025590 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 57-292
Cow position: chr7:26851854-26852083 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 88

Conread position: 57-292
Cow position: chr7:30302785-30303004 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 117

Conread position: 57-292
Cow position: chr7:41876090-41875848 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 137, 70

Conread position: 83-292
Cow position: chr7:63951221-63951004 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 72

Conread position: 57-272
Cow position: chr8:38585936-38585725 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 17

Conread position: 57-284
Cow position: chr8:19188592-19188826 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 58

Conread position: 57-292
Cow position: chr8:24874764-24874513 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 57-292
Cow position: chr8:38578011-38577775 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 17

Conread position: 58-229
Cow position: chr8:16085093-16085267 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 131

Conread position: 57-211
Cow position: chr9:64159535-64159696 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 141

Conread position: 57-254
Cow position: chr9:3726691-3726894 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 107

Conread position: 57-288
Cow position: chr9:59511391-59511639 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 176

Conread position: 57-292
Cow position: chr9:3393597-3393356 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 132, 62

Conread position: 57-292
Cow position: chr9:42555912-42556182 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 75-292
Cow position: chr9:29328689-29328909 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 74

Conread position: 47-292
Cow position: chrX:13417506-13417262 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 74, 14

Conread position: 47-296
Cow position: chrX:24112917-24112660 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 7

Conread position: 57-275
Cow position: chrX:30132494-30132272 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 136

Conread position: 57-287
Cow position: chrX:6250519-6250271 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 66, 85

Conread position: 57-288
Cow position: chrX:29814768-29815013 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 57-288
Cow position: chrX:41889038-41888797 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 57-292
Cow position: chrX:10417393-10417138 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 66, 96

Conread position: 57-296
Cow position: chrX:2012728-2012490 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 145, 9