Cow genome map
| Conread name: | Ss1.1-rplac_8427.5 |
| Conread position: | 60-230 |
| Cow position: | chr1:50743688-50743858 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-362 |
| Cow position: | chr1:50744900-50745037 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 131 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 354-504 |
| Cow position: | chr1:50745147-50745298 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 494-588 |
| Cow position: | chr1:50748689-50748783 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-509 |
| Cow position: | chr14:25860096-25860472 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 328 |
| Conread position: | 141-503 |
| Cow position: | chr14:25895025-25895388 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 145-503 |
| Cow position: | chr14:25895366-25895724 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 147-499 |
| Cow position: | chr14:25895536-25895888 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 224, 198 |
| Conread position: | 147-509 |
| Cow position: | chr14:25859606-25859968 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 147-509 |
| Cow position: | chr14:25895116-25895478 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 140, 119 |
| Conread position: | 147-509 |
| Cow position: | chr14:25895620-25895982 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 297, 303 |
| Conread position: | 147-528 |
| Cow position: | chr14:25895284-25895665 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 297, 303 |
| Conread position: | 209-509 |
| Cow position: | chr14:25836111-25836411 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 146, 156 |
| Conread position: | 218-509 |
| Cow position: | chr14:25860013-25860304 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 86 |
| Conread position: | 219-509 |
| Cow position: | chr14:25877065-25877355 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 127-503 |
| Cow position: | chr18:56330038-56329660 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 5 |
| Conread position: | 226-361 |
| Cow position: | chr19:14688555-14688690 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 357-496 |
| Cow position: | chr19:14688800-14688939 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-508 |
| Cow position: | chr21:12659176-12659614 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 64 |
| Conread position: | 134-509 |
| Cow position: | chr21:12658901-12659279 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 220 |
| Conread position: | 145-529 |
| Cow position: | chr24:17036380-17035996 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 107, 111 |
| Conread position: | 147-493 |
| Cow position: | chr25:33157305-33156959 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 147-509 |
| Cow position: | chr25:22235913-22236275 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 207, 229 |
| Conread position: | 199-489 |
| Cow position: | chr25:326975-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 155, 166 |
| Conread position: | 147-508 |
| Cow position: | chr28:34695912-34696273 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 197-509 |
| Cow position: | chr28:34696214-34696526 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 246, 260 |
| Conread position: | 219-500 |
| Cow position: | chr28:34696068-34696349 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 225, 235 |
| Conread position: | 70-508 |
| Cow position: | chr6:49428823-49429261 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 78-508 |
| Cow position: | chr6:49428495-49428925 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 182-508 |
| Cow position: | chr6:49428263-49428589 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 65 |
| Conread position: | 209-508 |
| Cow position: | chr6:49428374-49428673 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 230, 243 |
| Conread position: | 282-508 |
| Cow position: | chr6:49428279-49428505 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 161, 172 |