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Cow genome map

           
Conread name:
           
Ss1.1-rpliv0125_p15.5
        

               
Conread position:
               
1-447
               

               
Cow position:
               
chr10:8996506-8996059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr10:8996842-8996381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 176
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr10:8996590-8996097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr10:8996336-8996051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
59-451
               

               
Cow position:
               
chr10:9010596-9010202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 149
               

               
Conread position:
               
88-445
               

               
Cow position:
               
chr10:9031254-9031613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
134-451
               

               
Cow position:
               
chr10:8996877-8996558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr11:74554513-74554175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr11:74554933-74554485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr11:74554679-74554229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
299, 342
               

               
Conread position:
               
11-451
               

               
Cow position:
               
chr11:74555091-74554649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr13:39984407-39984872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr13:39983987-39984480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr13:39984071-39984564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr13:39984577-39984903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
65-451
               

               
Cow position:
               
chr13:39984387-39984775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
145, 159
               

               
Conread position:
               
135-447
               

               
Cow position:
               
chr13:56292145-56291831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
142-451
               

               
Cow position:
               
chr13:56333692-56334003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr14:25784358-25784733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr14:25860366-25860781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr14:25859694-25860123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr14:25836053-25836483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr14:25859358-25859788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr14:25876745-25877188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr14:25794588-25794144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr14:25784106-25784553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
294, 429
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr14:25859526-25859973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr14:25859778-25860225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr14:25783938-25784385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
294, 429
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25783350-25783802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25783518-25783970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25783770-25784222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25784274-25784726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25794756-25794303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25795008-25794556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25836305-25836757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25836557-25837009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25860114-25860566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr14:25877165-25877617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr14:25795176-25794684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr14:25859191-25859633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr14:25795343-25794897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr14:3101076-3100713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
287, 16
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr14:25836727-25837173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
12-429
               

               
Cow position:
               
chr14:25877428-25877848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
12-456
               

               
Cow position:
               
chr14:25876504-25876950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
52-447
               

               
Cow position:
               
chr14:25876460-25876857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 101
               

               
Conread position:
               
134-428
               

               
Cow position:
               
chr14:25835934-25836231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
151-446
               

               
Cow position:
               
chr14:3127782-3127485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr16:14627159-14626777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr16:14627411-14626965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr16:14627747-14627300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
12-451
               

               
Cow position:
               
chr16:14627820-14627379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
12-459
               

               
Cow position:
               
chr16:14627484-14627037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
86-428
               

               
Cow position:
               
chr16:14627914-14627569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
113, 142
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr17:22499305-22498939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr17:22452207-22451834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr17:22589592-22589196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr17:22498969-22498539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr17:22473508-22473954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr17:22552678-22552230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr17:22452375-22451923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr17:22499053-22498601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr17:22552258-22551806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr17:22552427-22551974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr17:22552174-22551717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr17:22589928-22589470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr17:22499388-22498942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr17:22590179-22589732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
7-446
               

               
Cow position:
               
chr17:22473262-22473703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
43-451
               

               
Cow position:
               
chr17:22590305-22589896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
65-368
               

               
Cow position:
               
chr17:22551858-22551552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
85-451
               

               
Cow position:
               
chr17:22499389-22499021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
218, 345
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr18:50058860-50058502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr18:53635365-53635003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr18:33093015-33092646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
210, 222
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr18:43022392-43022023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr18:50251174-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr18:50099906-50100276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr18:56128800-56129171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr18:50099822-50100197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 65
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr18:42837509-42837128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:42744206-42743824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr18:43048637-43048255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr18:42959788-42959396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
216, 33
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr18:41948753-41948332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr18:14453281-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
288, 395
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr18:41198338-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr18:44184375-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:42792483-42792906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr18:43174929-43174499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
287, 387
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr18:51400791-51401221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr18:14453929-14453498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr18:51751908-51751478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr18:52447955-52448393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:43093663-43093220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:43119980-43119537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:51368427-51367984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:51765739-51765296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:51765907-51765464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:51789718-51789275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:51839386-51838943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:43168135-43168578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:40324457-40324010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:42674894-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:42960040-42959602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:42984965-42984518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:43175433-43174986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:44184711-44184264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:44240352-44240799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:44398180-44397733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr18:49033375-49032928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:33064343-33063895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
121, 137
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:33064595-33064148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:40086423-40085981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:40324793-40324345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:41198002-41198449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:42674978-42674531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:42744290-42743843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:42791055-42791502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:42960292-42959844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:43120316-43119868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:43175097-43174649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:43175517-43175069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:44153941-44153512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:44253884-44253437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:44398012-44397564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:44398264-44397816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
156, 151
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:50059112-50058664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:50083709-50084157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:50098982-50099430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:50099234-50099681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:50099486-50099933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:51765403-51764955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:51789466-51789018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:51789550-51789102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:51812709-51812261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:52447199-52447647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:54979651-54980099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
119, 144
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:56247554-56247116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
213, 62
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr18:51789130-51788680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:1418093-1418545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:33064091-33063639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
141, 124
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:40324541-40324089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:41948837-41948385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:41949173-41948721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:42744626-42744174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:42791895-42792347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:42791979-42792431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:42959872-42959429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:43022728-43022276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:43093243-43092792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:43093579-43093127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:43093987-43093547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:44154360-44153909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:44184459-44184007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:44184627-44184175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:44184879-44184427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:44239848-44240300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:50295363-50295815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
138, 125
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:50848846-50849298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:51752076-51751624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52427640-52428092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52427808-52428260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52432989-52433441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52433157-52433609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52433325-52433777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52447367-52447819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52447535-52447987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:52447787-52448239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:55523651-55524103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:40086507-40086055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:40306596-40307051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:42837677-42837223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:43023064-43022609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:49033123-49032669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:51812373-51811919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:51812877-51812422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr18:54979818-54980273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr18:33064511-33064054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr18:41197582-41198039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 54
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr18:41198170-41198627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr18:44253633-44253189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 66
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr18:40086255-40085807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr18:55018055-55018513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr18:40306428-40306887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr18:42792315-42792774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:42985469-42985010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr18:42837761-42837297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
198, 227
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:44154192-44153706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr18:1418262-1418548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr18:44397927-44397557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr18:40306933-40307347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
2-425
               

               
Cow position:
               
chr18:50848931-50849357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr18:52428565-52428994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr18:52433746-52434175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr18:51766074-51765627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr18:52428481-52428928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr18:52433662-52434109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 64
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr18:53509498-53509945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr18:53525952-53526399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr18:55523568-55524015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr18:52427893-52428344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr18:52428061-52428512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr18:52428313-52428764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr18:52433242-52433693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr18:52433494-52433945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr18:55018308-55018768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr18:54993501-54993859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr18:50058942-50058580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr18:56434306-56434668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
216, 226
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr18:40324287-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr18:53509583-53509950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr18:1418179-1418548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr18:33064005-33063627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr18:52012098-52011689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
266, 270
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr18:55066933-55066524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:53559935-53560345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:56329254-56328844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr18:42674808-42674395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr18:53525869-53526282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr18:56494105-56494518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr18:42827497-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr18:54980073-54980490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
3-442
               

               
Cow position:
               
chr18:41949255-41948814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
3-442
               

               
Cow position:
               
chr18:43048719-43048281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
3-442
               

               
Cow position:
               
chr18:52447873-52448315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
3-442
               

               
Cow position:
               
chr18:54993417-54993858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
3-444
               

               
Cow position:
               
chr18:44154106-44153670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr18:33064929-33064485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr18:44240018-44240463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr18:53498486-53498932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr18:53526037-53526481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
119, 133
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr18:56434474-56434919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
295, 277
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:33064173-33063727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
211, 204
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:42675144-42674698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
283, 343
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:42791141-42791586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:49032785-49032339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:52012266-52011821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:53560103-53560549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:54968047-54968493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:54980241-54980686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
292, 331
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr18:54992829-54993275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:42791729-42792179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:42985299-42984849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:43022474-43022024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:50246254-50246704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:50848428-50848878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:53560355-53560801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:53635447-53634997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr18:55008820-55009270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr18:53498062-53498517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 123
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr18:55018393-55018850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
3-457
               

               
Cow position:
               
chr18:40306262-40306716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
3-457
               

               
Cow position:
               
chr18:53635615-53635158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr18:54993249-54993708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
3-471
               

               
Cow position:
               
chr18:40306514-40306985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
4-446
               

               
Cow position:
               
chr18:43168054-43168498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr18:44240188-44240631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
5-456
               

               
Cow position:
               
chr18:42960120-42959676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr18:51839297-51838859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr18:51812788-51812345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr18:52447624-52448067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr18:53586567-53586124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr18:54979572-54980015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr18:55008571-55009014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 109
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr18:55017892-55018335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr18:54967716-54968167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:52427981-52428440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
7-427
               

               
Cow position:
               
chr18:51969354-51969775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
7-451
               

               
Cow position:
               
chr18:43175670-43175233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr18:14454007-14453528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr18:51839125-51838847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr18:33093088-33092652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr18:51752233-51751796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
12-447
               

               
Cow position:
               
chr18:52447294-52447731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
12-473
               

               
Cow position:
               
chr18:42791654-42792121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
14-447
               

               
Cow position:
               
chr18:44253951-44253520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
18-425
               

               
Cow position:
               
chr18:50059599-50059189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
18-447
               

               
Cow position:
               
chr18:43093727-43093300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
18-451
               

               
Cow position:
               
chr18:50246353-50246788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
20-448
               

               
Cow position:
               
chr18:51969617-51970038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
51-447
               

               
Cow position:
               
chr18:33064798-33064400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
54-447
               

               
Cow position:
               
chr18:56434105-56434500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
58-449
               

               
Cow position:
               
chr18:51368202-51367809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
146, 171
               

               
Conread position:
               
60-447
               

               
Cow position:
               
chr18:53559824-53560213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
65-440
               

               
Cow position:
               
chr18:51368616-51368236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
65-451
               

               
Cow position:
               
chr18:43048741-43048353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
143, 164
               

               
Conread position:
               
68-425
               

               
Cow position:
               
chr18:50083860-50084220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
219, 226
               

               
Conread position:
               
68-447
               

               
Cow position:
               
chr18:50099805-50100186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
223, 326
               

               
Conread position:
               
68-455
               

               
Cow position:
               
chr18:50099217-50099606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
228, 237
               

               
Conread position:
               
68-456
               

               
Cow position:
               
chr18:42791542-42791932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
68-466
               

               
Cow position:
               
chr18:50059297-50058898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 142
               

               
Conread position:
               
72-447
               

               
Cow position:
               
chr18:56128703-56129079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
230, 279
               

               
Conread position:
               
72-451
               

               
Cow position:
               
chr18:50021818-50021434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 361
               

               
Conread position:
               
73-456
               

               
Cow position:
               
chr18:42744722-42744337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
77-442
               

               
Cow position:
               
chr18:51367596-51367229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
80-442
               

               
Cow position:
               
chr18:51789135-51788771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
137, 128
               

               
Conread position:
               
80-447
               

               
Cow position:
               
chr18:44398438-44398068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 306
               

               
Conread position:
               
84-451
               

               
Cow position:
               
chr18:55523314-55523683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
86-420
               

               
Cow position:
               
chr18:50271805-50272142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 109
               

               
Conread position:
               
87-459
               

               
Cow position:
               
chr18:55008820-55009194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
90-447
               

               
Cow position:
               
chr18:50246005-50246364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
202, 304
               

               
Conread position:
               
92-438
               

               
Cow position:
               
chr18:51839127-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
178, 182
               

               
Conread position:
               
95-367
               

               
Cow position:
               
chr18:43094060-43093786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
96-442
               

               
Cow position:
               
chr18:51874160-51874506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
102-451
               

               
Cow position:
               
chr18:43094135-43093787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
190, 44
               

               
Conread position:
               
132-446
               

               
Cow position:
               
chr18:44184916-44184600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
158, 298
               

               
Conread position:
               
135-442
               

               
Cow position:
               
chr18:51969398-51969705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 90
               

               
Conread position:
               
142-447
               

               
Cow position:
               
chr18:41949368-41949062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
142-447
               

               
Cow position:
               
chr18:53635392-53635086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 209
               

               
Conread position:
               
142-456
               

               
Cow position:
               
chr18:50848735-50849051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
143-451
               

               
Cow position:
               
chr18:42675340-42675030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 287
               

               
Conread position:
               
144-408
               

               
Cow position:
               
chr18:51765176-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
146, 236
               

               
Conread position:
               
150-456
               

               
Cow position:
               
chr18:43048740-43048432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
152-453
               

               
Cow position:
               
chr18:53525765-53526069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 122
               

               
Conread position:
               
155-442
               

               
Cow position:
               
chr18:14453295-14453006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
141, 275
               

               
Conread position:
               
155-451
               

               
Cow position:
               
chr18:49022807-49023105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
137, 242
               

               
Conread position:
               
155-451
               

               
Cow position:
               
chr18:51874301-51874599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
137, 270
               

               
Conread position:
               
156-410
               

               
Cow position:
               
chr18:56248165-56247908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
228-442
               

               
Cow position:
               
chr18:42837954-42837738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 202
               

               
Conread position:
               
235-446
               

               
Cow position:
               
chr18:56247740-56247527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 195
               

               
Conread position:
               
240-451
               

               
Cow position:
               
chr18:14453294-14453081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 144
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr19:23614783-23615068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr19:23650149-23650437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr19:23597288-23597698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr19:43570049-43569634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr19:20635458-20635038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr19:20678378-20678802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr19:14960384-14959943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr19:14940331-14940778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr19:14940499-14940946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr19:14940079-14940527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr19:20635542-20635095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr19:23613775-23614222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr19:23614279-23614727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr19:43570217-43569769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr19:14940583-14941035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr19:14960300-14959850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr19:20635626-20635174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr19:20677454-20677906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
121, 136
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr19:20677958-20678410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr19:23613355-23613807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr19:23614363-23614815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr19:23614615-23615067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr19:23613523-23613976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr19:23649729-23650183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr19:14940669-14941048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
3-438
               

               
Cow position:
               
chr19:23614701-23615136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr19:23613945-23614389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr19:23597206-23597651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr19:23613693-23614139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr19:20677708-20678158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr19:23649563-23650013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
4-425
               

               
Cow position:
               
chr19:23649984-23650408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr19:23597040-23597488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
6-492
               

               
Cow position:
               
chr19:20678215-20678703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
12-451
               

               
Cow position:
               
chr19:14940006-14940447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
21-451
               

               
Cow position:
               
chr19:20677309-20677738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
46-447
               

               
Cow position:
               
chr19:23614493-23614895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
244, 19
               

               
Conread position:
               
58-447
               

               
Cow position:
               
chr19:23649453-23649841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
232, 12
               

               
Conread position:
               
65-446
               

               
Cow position:
               
chr19:43570237-43569854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
205, 209
               

               
Conread position:
               
72-452
               

               
Cow position:
               
chr19:14948470-14948091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
87-451
               

               
Cow position:
               
chr19:14939997-14940363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
99-451
               

               
Cow position:
               
chr19:14959305-14958957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
130, 111
               

               
Conread position:
               
149-492
               

               
Cow position:
               
chr19:43570395-43570060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
228-447
               

               
Cow position:
               
chr19:14960409-14960189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 202
               

               
Conread position:
               
231-447
               

               
Cow position:
               
chr19:23613332-23613550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr21:34223045-34222627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
225-451
               

               
Cow position:
               
chr21:34223075-34222847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr22:14468400-14468761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr22:12385325-12384943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:12475712-12475289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:12499547-12499970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr22:14442133-14442580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr22:12399587-12399139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr22:12431147-12430699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
291, 387
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr22:12431987-12431539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
295, 429
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr22:12432071-12431623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr22:12432323-12431876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
223, 203
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr22:14430323-14430771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr22:11640947-11641399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr22:12385409-12384957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr22:12399335-12398883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr22:12476216-12475764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr22:14429651-14430103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
219, 228
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr22:14468064-14468516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr22:12431231-12430777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr22:12399671-12399214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr22:12499043-12499507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr22:12399166-12398757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr22:14430072-14430523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 135
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr22:14468318-14468685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 151
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr22:14468234-14468653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 154
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr22:11641033-11641453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr22:46654356-46654784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
3-440
               

               
Cow position:
               
chr22:11640697-11641136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr22:11640865-11641310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr22:14429989-14430435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 151
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr22:12476046-12475596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
293, 378
               

               
Conread position:
               
3-452
               

               
Cow position:
               
chr22:14468150-14468601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 122
               

               
Conread position:
               
3-453
               

               
Cow position:
               
chr22:12458265-12457813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr22:12475878-12475421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr22:12499381-12499839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr22:46654188-46654646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr22:12431733-12431275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
271, 266
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr22:14429737-14430228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
4-447
               

               
Cow position:
               
chr22:12431396-12430952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
210, 202
               

               
Conread position:
               
5-447
               

               
Cow position:
               
chr22:14467984-14468428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr22:14430580-14431011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 118
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr22:12458598-12458155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr22:12458174-12457759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 126
               

               
Conread position:
               
11-452
               

               
Cow position:
               
chr22:14441975-14442418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
52-451
               

               
Cow position:
               
chr22:12458635-12458235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
244, 13
               

               
Conread position:
               
60-447
               

               
Cow position:
               
chr22:46654077-46654466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
236, 368
               

               
Conread position:
               
72-451
               

               
Cow position:
               
chr22:11666523-11666904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
85-442
               

               
Cow position:
               
chr22:12399839-12399480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 143
               

               
Conread position:
               
86-451
               

               
Cow position:
               
chr22:12385662-12385293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
90-442
               

               
Cow position:
               
chr22:12498880-12499234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
90-456
               

               
Cow position:
               
chr22:12432486-12432118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
202, 340
               

               
Conread position:
               
105-452
               

               
Cow position:
               
chr22:14468000-14468349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
185, 262
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr22:12545594-12545856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
143-461
               

               
Cow position:
               
chr22:14467954-14468274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
149, 287
               

               
Conread position:
               
166-447
               

               
Cow position:
               
chr22:12432494-12432212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 264
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr23:24522479-24522192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr23:25660408-25660737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr23:25660324-25660736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr23:24547073-24546660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr23:24639557-24639987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr23:25626287-25626731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr23:24560717-24560269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr23:24560548-24560128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr23:24560463-24560125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr23:24522561-24522192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
4-438
               

               
Cow position:
               
chr23:24626316-24626750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
5-380
               

               
Cow position:
               
chr23:24654042-24654419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
5-418
               

               
Cow position:
               
chr23:24535868-24535452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 105
               

               
Conread position:
               
5-436
               

               
Cow position:
               
chr23:25626543-25626973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
220, 30
               

               
Conread position:
               
7-447
               

               
Cow position:
               
chr23:24560879-24560437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
10-425
               

               
Cow position:
               
chr23:25660165-25660583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
10-447
               

               
Cow position:
               
chr23:24536031-24535592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
10-447
               

               
Cow position:
               
chr23:24639230-24639669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr23:25724105-25723713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
65-451
               

               
Cow position:
               
chr23:24547261-24546873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
231, 365
               

               
Conread position:
               
72-451
               

               
Cow position:
               
chr23:24522823-24522447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
79-446
               

               
Cow position:
               
chr23:24547331-24546962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
90-447
               

               
Cow position:
               
chr23:24639226-24639585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
135-451
               

               
Cow position:
               
chr23:24626279-24626597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
164-451
               

               
Cow position:
               
chr23:25626030-25626319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 265
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:17077921-17077509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr24:17035954-17035520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr24:17035702-17035255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr24:17036290-17035838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr24:17070548-17070999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr24:17070467-17070915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
21-451
               

               
Cow position:
               
chr24:17078153-17077721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
71-447
               

               
Cow position:
               
chr24:17035464-17035087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 157
               

               
Conread position:
               
72-337
               

               
Cow position:
               
chr24:17035295-17035027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
72-369
               

               
Cow position:
               
chr24:17036135-17035835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 157
               

               
Conread position:
               
91-441
               

               
Cow position:
               
chr24:17013174-17013525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
219, 316
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr25:33157133-33156770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr25:23420471-23420840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr25:36801547-36801967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr25:33298567-33299014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr25:33298651-33299098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr25:33298987-33299434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr25:34447110-34447557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr25:34770036-34769589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr25:36800719-36801166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr25:34769700-34769252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr25:23420387-23420839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr25:33144937-33145386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr25:33305398-33304950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr25:34447363-34447798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr25:33298904-33299355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 54
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr25:33299493-33299856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr25:33145023-33145428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr25:33299409-33299827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr25:33157215-33156770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr25:33299325-33299771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr25:33157467-33157017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
3-452
               

               
Cow position:
               
chr25:36800637-36801088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr25:33299241-33299696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr25:36801468-36801911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
87-402
               

               
Cow position:
               
chr25:366731-367049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
143-423
               

               
Cow position:
               
chr25:326985-327268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
228-451
               

               
Cow position:
               
chr25:33127781-33128006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
64, 202
               

               
Conread position:
               
230-451
               

               
Cow position:
               
chr25:34433001-34433224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 200
               

               
Conread position:
               
232-445
               

               
Cow position:
               
chr25:22235896-22236111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 197
               

               
Conread position:
               
234-447
               

               
Cow position:
               
chr25:326992-327208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
65, 161
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr27:21616018-21615542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr28:7758008-7758294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr28:9253191-9253612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr28:7757672-7758094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr28:7757756-7758203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr28:9253107-9253559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr28:9298656-9299103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr28:9253023-9253482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr28:9290257-9290625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr28:7758414-7758776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
5-447
               

               
Cow position:
               
chr28:7757508-7757952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr28:9290345-9290695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
18-433
               

               
Cow position:
               
chr28:7810528-7810945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
65-447
               

               
Cow position:
               
chr28:11334153-11333769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 164
               

               
Conread position:
               
90-369
               

               
Cow position:
               
chr28:34673364-34673646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
91-456
               

               
Cow position:
               
chr28:7758334-7758701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
201, 339
               

               
Conread position:
               
143-447
               

               
Cow position:
               
chr28:7757478-7757784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
147, 239
               

               
Conread position:
               
187-428
               

               
Cow position:
               
chr28:7810286-7810530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
67-419
               

               
Cow position:
               
chr29:39627189-39626835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
153, 162
               

               
Conread position:
               
134-447
               

               
Cow position:
               
chr29:39627206-39626891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:42314529-42314077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:42315032-42314582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:42315200-42314748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr4:42314109-42313623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 183
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr4:42314778-42314335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chr4:42314440-42313997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
72-451
               

               
Cow position:
               
chr4:42314122-42313746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
216, 196
               

               
Conread position:
               
90-425
               

               
Cow position:
               
chr4:42314272-42313934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
90-492
               

               
Cow position:
               
chr4:42315361-42314959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 74
               

               
Conread position:
               
165-447
               

               
Cow position:
               
chr4:42315370-42315088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 86
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr6:49340996-49341423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
60, 56
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr6:49395883-49396325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
207, 218
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr6:49340662-49341112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr6:49340410-49340862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
135-446
               

               
Cow position:
               
chr6:49396263-49396576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
140-418
               

               
Cow position:
               
chr6:49340381-49340660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
234-451
               

               
Cow position:
               
chr6:49340389-49340608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 195
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr7:11434483-11434240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr7:42878684-42878312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr7:8278356-8278723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr7:11434644-11434255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr7:8243894-8244312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
209, 101
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr7:18390166-18390609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
198, 228
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr7:1014445-1014887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr7:11600931-11600484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr7:11601099-11600652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:1014943-1015395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:1015027-1015481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:8242887-8243339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
198, 243
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:8243055-8243506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:8243474-8243926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:8243642-8244091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:8324905-8325357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 378
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:8325409-8325861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:8325661-8326113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:11601183-11600731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr7:42879020-42878568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr7:42878936-42878479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr7:42879272-42878813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr7:8277684-8278146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
292, 382
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr7:8278272-8278725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr7:8243307-8243794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr7:3180373-3180864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr7:8277432-8277925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 429
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr7:8277936-8278429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 136
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr7:8325073-8325566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr7:8325157-8325650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 429
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr7:8325577-8326070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr7:8325829-8326319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
156, 151
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr7:3179954-3180401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr7:8242804-8243251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr7:8277853-8278303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr7:11434811-11434367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 82
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr7:18389999-18390450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr7:11600761-11600437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr7:8278022-8278450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
280, 381
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr7:18390336-18390782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr7:8277770-8278220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr7:42878850-42878395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr7:3180039-3180496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
3-475
               

               
Cow position:
               
chr7:8324739-8325213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
3-491
               

               
Cow position:
               
chr7:8277266-8277756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
4-447
               

               
Cow position:
               
chr7:1014694-1015139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
6-451
               

               
Cow position:
               
chr7:1439817-1440262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
293, 54
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr7:8244144-8244454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
253, 21
               

               
Conread position:
               
72-445
               

               
Cow position:
               
chr7:1014846-1015221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
230, 358
               

               
Conread position:
               
72-488
               

               
Cow position:
               
chr7:11434657-11434247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 118
               

               
Conread position:
               
73-341
               

               
Cow position:
               
chr7:11434824-11434553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
108, 103
               

               
Conread position:
               
86-492
               

               
Cow position:
               
chr7:8242804-8243212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 344
               

               
Conread position:
               
89-451
               

               
Cow position:
               
chr7:3179705-3180069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
139, 118
               

               
Conread position:
               
90-433
               

               
Cow position:
               
chr7:11601261-11600917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
155-447
               

               
Cow position:
               
chr7:1439460-1439757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
161-465
               

               
Cow position:
               
chr7:8277256-8277563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
133, 269
               

               
Conread position:
               
162-491
               

               
Cow position:
               
chr7:8324731-8325061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
128, 5
               

               
Conread position:
               
164-451
               

               
Cow position:
               
chr7:1014272-1014561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
243-451
               

               
Cow position:
               
chr7:1014267-1014477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 187
               

               
Conread position:
               
245-411
               

               
Cow position:
               
chr7:11434974-11434806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 162
               

               
Conread position:
               
245-492
               

               
Cow position:
               
chr7:8324729-8324978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr8:55580910-55581356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr8:45200938-45201385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr8:46816721-46817168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr8:55581246-55581693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr8:45201022-45201470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr8:45201190-45201637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr8:46816133-46816581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr8:46816889-46817337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr8:48407290-48406838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr8:48407542-48407090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr8:45201359-45201801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr8:48406953-48406506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr8:46816639-46817084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
5-447
               

               
Cow position:
               
chr8:46816053-46816497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr8:46816978-46817342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
18-447
               

               
Cow position:
               
chr8:46816318-46816749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
73-447
               

               
Cow position:
               
chr8:48406714-48406338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
134-446
               

               
Cow position:
               
chr8:46816014-46816328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
156, 250
               

               
Conread position:
               
187-451
               

               
Cow position:
               
chr8:46815983-46816249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chrX:12627693-12628062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chrX:29045088-29044658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chrX:25310146-25310586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chrX:25325247-25324799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chrX:25325583-25325136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chrX:12627443-12627893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chrX:25324743-25324291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chrX:25324911-25324459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chrX:25325163-25324711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chrX:25309979-25310430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chrX:25309896-25310342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chrX:25324993-25324548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chrX:12627864-12628081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
5-447
               

               
Cow position:
               
chrX:25309730-25310174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chrX:29045251-29044808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
8-447
               

               
Cow position:
               
chrX:29045333-29044892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
73-447
               

               
Cow position:
               
chrX:25325595-25325220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
90-446
               

               
Cow position:
               
chrX:29045734-29045376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 117
               

               
Conread position:
               
174-474
               

               
Cow position:
               
chrX:12627280-12627582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
109, 213