Cow genome map

Conread name: Ss1.1-rptbr0106_g8.5

Conread position: 754-953
Cow position: chr10:54450061-54449856 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 14, 108

Conread position: 766-956
Cow position: chr10:22619621-22619820 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 126

Conread position: 768-950
Cow position: chr10:37254504-37254691 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 101

Conread position: 754-956
Cow position: chr11:8340516-8340726 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 130

Conread position: 755-947
Cow position: chr11:44884754-44884557 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 80

Conread position: 761-948
Cow position: chr11:37442713-37442521 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 762-951
Cow position: chr11:72968911-72968709 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 69

Conread position: 769-956
Cow position: chr11:84743059-84742862 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 37

Conread position: 758-956
Cow position: chr12:1238402-1238600 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 64

Conread position: 766-950
Cow position: chr12:8643379-8643186 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 27

Conread position: 766-951
Cow position: chr13:396578-396395 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 176, 22

Conread position: 752-948
Cow position: chr14:43179881-43180091 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 766-946
Cow position: chr14:23972876-23973067 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 766-959
Cow position: chr14:3706808-3707014 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 68

Conread position: 769-957
Cow position: chr14:25670081-25670282 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 123

Conread position: 770-960
Cow position: chr14:33171133-33170927 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 754-951
Cow position: chr15:1524185-1523983 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 17, 176

Conread position: 755-951
Cow position: chr15:47632446-47632237 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 55

Conread position: 758-956
Cow position: chr15:40390611-40390397 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 759-957
Cow position: chr15:38638265-38638065 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 60, 5

Conread position: 769-947
Cow position: chr15:29199303-29199112 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 754-946
Cow position: chr16:25282649-25282850 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 9

Conread position: 758-954
Cow position: chr16:19420507-19420712 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 173

Conread position: 761-958
Cow position: chr16:39442425-39442215 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 206

Conread position: 766-925
Cow position: chr16:18017244-18017410 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 766-956
Cow position: chr16:27982868-27983065 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 176

Conread position: 768-951
Cow position: chr17:43459246-43459438 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 755-947
Cow position: chr18:28525723-28525928 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 755-956
Cow position: chr18:44025957-44025742 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 756-957
Cow position: chr18:8389798-8389583 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 118

Conread position: 766-956
Cow position: chr18:20285698-20285895 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 124

Conread position: 768-956
Cow position: chr18:17636180-17636375 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 769-956
Cow position: chr18:39860246-39860053 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 770-958
Cow position: chr19:39935977-39936162 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 157, 60

Conread position: 847-957
Cow position: chr19:36262997-36263108 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 340-466
Cow position: chr2:14459078-14459205 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 80, 42

Conread position: 468-959
Cow position: chr2:14459157-14459643 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 275

Conread position: 731-956
Cow position: chr2:39483288-39483046 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 76

Conread position: 754-957
Cow position: chr2:26677713-26677925 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 15

Conread position: 761-947
Cow position: chr2:39541244-39541443 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 766-947
Cow position: chr2:21727400-21727587 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 98

Conread position: 769-951
Cow position: chr2:37600567-37600761 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 754-956
Cow position: chr20:12663058-12663270 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 54

Conread position: 793-956
Cow position: chr20:7138152-7138329 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 762-958
Cow position: chr21:36159531-36159721 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 56

Conread position: 766-956
Cow position: chr21:35999685-35999509 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 161, 52

Conread position: 730-950
Cow position: chr22:12595995-12595786 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 79

Conread position: 754-957
Cow position: chr22:31309913-31309700 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 766-956
Cow position: chr22:37383344-37383141 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 769-956
Cow position: chr22:23950279-23950475 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 194

Conread position: 781-951
Cow position: chr22:45467395-45467575 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 820-956
Cow position: chr22:35417641-35417504 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 19

Conread position: 766-956
Cow position: chr23:26696395-26696597 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 766-936
Cow position: chr24:26432079-26431906 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 766-957
Cow position: chr24:14629608-14629405 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 761-950
Cow position: chr26:9639030-9638830 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 156

Conread position: 766-951
Cow position: chr26:6620448-6620638 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 52, 79

Conread position: 769-948
Cow position: chr27:13830438-13830632 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 758-956
Cow position: chr28:20543549-20543352 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 54

Conread position: 766-950
Cow position: chr28:11014934-11014743 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 73

Conread position: 768-957
Cow position: chr28:30230085-30230280 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 754-957
Cow position: chr29:21241876-21242091 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 206

Conread position: 754-951
Cow position: chr3:4913491-4913697 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 128

Conread position: 755-956
Cow position: chr3:60318212-60318004 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 12

Conread position: 756-956
Cow position: chr3:23410394-23410611 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 760-951
Cow position: chr3:79326046-79325858 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 6

Conread position: 768-951
Cow position: chr3:6497360-6497547 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 11

Conread position: 768-956
Cow position: chr3:61033622-61033422 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 131

Conread position: 769-956
Cow position: chr3:58105680-58105483 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 36

Conread position: 769-956
Cow position: chr3:75614610-75614411 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 770-951
Cow position: chr3:9779472-9779662 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 36

Conread position: 843-951
Cow position: chr3:62799871-62799980 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 754-951
Cow position: chr4:19120471-19120667 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 66

Conread position: 758-956
Cow position: chr4:49156680-49156888 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 59, 10

Conread position: 761-950
Cow position: chr4:19139046-19138844 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 45

Conread position: 766-956
Cow position: chr4:29210063-29209866 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 9

Conread position: 778-956
Cow position: chr4:7738106-7737915 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 766-950
Cow position: chr5:9587337-9587142 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 766-956
Cow position: chr5:56679658-56679457 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 105

Conread position: 768-940
Cow position: chr5:10549053-10549232 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 769-956
Cow position: chr5:26785596-26785395 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 116

Conread position: 771-956
Cow position: chr5:47592797-47592980 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 8

Conread position: 761-931
Cow position: chr6:21673876-21674052 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 761-949
Cow position: chr6:4568882-4569076 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 766-950
Cow position: chr6:15670673-15670478 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 109

Conread position: 766-956
Cow position: chr6:48668851-48669054 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 767-957
Cow position: chr6:2179244-2179040 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 755-951
Cow position: chr7:63987509-63987298 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 15

Conread position: 756-956
Cow position: chr7:24535410-24535199 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 761-956
Cow position: chr7:55968115-55967903 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 781-957
Cow position: chr7:31439402-31439220 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 85

Conread position: 755-956
Cow position: chr8:19004747-19004961 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 766-956
Cow position: chr8:53811027-53810827 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 755-956
Cow position: chr9:55382012-55382226 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 767-951
Cow position: chr9:16331389-16331200 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 754-956
Cow position: chrX:6025426-6025631 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 83

Conread position: 767-950
Cow position: chrX:14852882-14853078 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 129

Conread position: 769-950
Cow position: chrX:6640806-6641000 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 769-956
Cow position: chrX:1117522-1117724 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0