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Cow genome map

           
Conread name:
           
Ss1.1-rret01_o24.5
        

               
Conread position:
               
16-427
               

               
Cow position:
               
chr10:21939112-21938702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
17-422
               

               
Cow position:
               
chr10:9010355-9009949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr10:9010429-9010033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr10:8996868-8996473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
207, 98
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr10:8996195-8996002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr10:9010511-9010117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr10:8996358-8996050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
34-415
               

               
Cow position:
               
chr10:9031231-9031613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
34-428
               

               
Cow position:
               
chr10:9010254-9009858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
38-423
               

               
Cow position:
               
chr10:8996438-8996053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
38-443
               

               
Cow position:
               
chr10:8996606-8996200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
360, 88
               

               
Conread position:
               
122-424
               

               
Cow position:
               
chr10:9010503-9010199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr11:74555042-74554648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
316, 97
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr11:74554953-74554645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
208, 90
               

               
Conread position:
               
34-347
               

               
Cow position:
               
chr11:74554533-74554221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
159, 90
               

               
Conread position:
               
36-424
               

               
Cow position:
               
chr11:74554699-74554310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
362, 90
               

               
Conread position:
               
133-422
               

               
Cow position:
               
chr11:74555107-74554816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
265, 0
               

               
Conread position:
               
27-343
               

               
Cow position:
               
chr13:39984548-39984863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
75, 87
               

               
Conread position:
               
27-427
               

               
Cow position:
               
chr13:39984044-39984445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
245, 91
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr13:39984129-39984524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
329, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr13:39984381-39984776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 96
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr13:39984465-39984860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
41-339
               

               
Cow position:
               
chr13:39983974-39984271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
249, 85
               

               
Conread position:
               
2-432
               

               
Cow position:
               
chr14:25795480-25795047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 124
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr14:3127728-3127344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
8-427
               

               
Cow position:
               
chr14:25859734-25860152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr14:25836600-25836924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
226, 9
               

               
Conread position:
               
15-426
               

               
Cow position:
               
chr14:25783311-25783723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
19-343
               

               
Cow position:
               
chr14:25876962-25877285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 91
               

               
Conread position:
               
19-422
               

               
Cow position:
               
chr14:25836774-25837178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
20-427
               

               
Cow position:
               
chr14:25836103-25836511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
253, 106
               

               
Conread position:
               
20-427
               

               
Cow position:
               
chr14:25836355-25836763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 85
               

               
Conread position:
               
20-427
               

               
Cow position:
               
chr14:25859408-25859816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 88
               

               
Conread position:
               
20-427
               

               
Cow position:
               
chr14:25876879-25877287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
23-258
               

               
Cow position:
               
chr14:25911058-25911292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 87
               

               
Conread position:
               
23-392
               

               
Cow position:
               
chr14:25859999-25860367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
177, 103
               

               
Conread position:
               
23-422
               

               
Cow position:
               
chr14:25877050-25877451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 87
               

               
Conread position:
               
23-469
               

               
Cow position:
               
chr14:25859915-25860366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
27-339
               

               
Cow position:
               
chr14:25794783-25794472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
158, 99
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr14:25783911-25784309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr14:25784247-25784645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
162, 99
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr14:25783576-25783973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
245, 98
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr14:25794866-25794469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr14:25794698-25794297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
257, 98
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr14:3155474-3155787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr14:25836532-25836926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
29-446
               

               
Cow position:
               
chr14:25795033-25794615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
160, 87
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chr14:25876725-25877119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
35-427
               

               
Cow position:
               
chr14:25877314-25877707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
35-441
               

               
Cow position:
               
chr14:25860263-25860670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
36-337
               

               
Cow position:
               
chr14:3127782-3127482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
41-441
               

               
Cow position:
               
chr14:25876564-25876965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 69
               

               
Conread position:
               
45-422
               

               
Cow position:
               
chr14:25835960-25836338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
50-422
               

               
Cow position:
               
chr14:25836049-25836422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
295, 76
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr16:14627449-14627042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
378, 110
               

               
Conread position:
               
28-320
               

               
Cow position:
               
chr16:14627101-14626810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
29-256
               

               
Cow position:
               
chr16:14627184-14626958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
38-320
               

               
Cow position:
               
chr16:14627259-14626978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
38-478
               

               
Cow position:
               
chr16:14627595-14627149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
360, 88
               

               
Conread position:
               
41-427
               

               
Cow position:
               
chr16:14627760-14627373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
337, 83
               

               
Conread position:
               
42-343
               

               
Cow position:
               
chr16:14627927-14627627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
118-422
               

               
Cow position:
               
chr16:14627936-14627630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
232, 226
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr17:22499268-22498939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
256, 17
               

               
Conread position:
               
6-424
               

               
Cow position:
               
chr17:22499437-22499018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
316, 118
               

               
Conread position:
               
10-256
               

               
Cow position:
               
chr17:22473716-22473962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
207, 108
               

               
Conread position:
               
16-427
               

               
Cow position:
               
chr17:22473470-22473882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 101
               

               
Conread position:
               
27-339
               

               
Cow position:
               
chr17:22551865-22551554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
27-381
               

               
Cow position:
               
chr17:22498912-22498559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
158, 99
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr17:22499080-22498682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
333, 97
               

               
Conread position:
               
27-444
               

               
Cow position:
               
chr17:22552537-22552119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
27-542
               

               
Cow position:
               
chr17:22473397-22473930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 84
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr17:22552956-22552642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
240, 96
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr17:22552368-22551973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
320, 96
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr17:22552620-22552225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr17:22552788-22552392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
214, 98
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr17:22590206-22589809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
317, 98
               

               
Conread position:
               
29-342
               

               
Cow position:
               
chr17:22452148-22451836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
34-423
               

               
Cow position:
               
chr17:22473572-22473963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
227, 83
               

               
Conread position:
               
34-423
               

               
Cow position:
               
chr17:22589864-22589474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
249, 83
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr17:22452227-22451834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
239, 83
               

               
Conread position:
               
34-447
               

               
Cow position:
               
chr17:22551942-22551528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 57
               

               
Conread position:
               
34-447
               

               
Cow position:
               
chr17:22552194-22551780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
38-423
               

               
Cow position:
               
chr17:22590028-22589642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
305, 88
               

               
Conread position:
               
40-391
               

               
Cow position:
               
chr17:22498983-22498633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
282, 86
               

               
Conread position:
               
41-514
               

               
Cow position:
               
chr17:22473327-22473813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 83
               

               
Conread position:
               
102-343
               

               
Cow position:
               
chr17:22452411-22452171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
170, 22
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr18:50848545-50848963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr18:49032499-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
266, 30
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr18:50848967-50849302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
272, 23
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr18:41197704-41198119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
337, 12
               

               
Conread position:
               
6-424
               

               
Cow position:
               
chr18:42744252-42743835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
11-489
               

               
Cow position:
               
chr18:52447830-52448310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr18:42792527-42792850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
225, 15
               

               
Conread position:
               
12-342
               

               
Cow position:
               
chr18:43093117-43092789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
15-397
               

               
Cow position:
               
chr18:51812579-51812199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
317, 14
               

               
Conread position:
               
16-423
               

               
Cow position:
               
chr18:51789588-51789180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
158, 110
               

               
Conread position:
               
16-423
               

               
Cow position:
               
chr18:51812747-51812339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
253, 101
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr18:40324747-40324338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 92
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr18:43119934-43119525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
16-427
               

               
Cow position:
               
chr18:53635487-53635075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
16-427
               

               
Cow position:
               
chr18:56128678-56129090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
19-257
               

               
Cow position:
               
chr18:41198471-41198708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
19-339
               

               
Cow position:
               
chr18:51765942-51765623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
155, 98
               

               
Conread position:
               
19-416
               

               
Cow position:
               
chr18:44240233-44240631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 89
               

               
Conread position:
               
19-444
               

               
Cow position:
               
chr18:44184830-44184404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 98
               

               
Conread position:
               
20-424
               

               
Cow position:
               
chr18:53560067-53560472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
156, 106
               

               
Conread position:
               
23-427
               

               
Cow position:
               
chr18:53610156-53609750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
25-257
               

               
Cow position:
               
chr18:42827634-42827865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
25-423
               

               
Cow position:
               
chr18:43022841-43022443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
265, 92
               

               
Conread position:
               
26-444
               

               
Cow position:
               
chr18:51812821-51812402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
250, 99
               

               
Conread position:
               
27-258
               

               
Cow position:
               
chr18:53560494-53560724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
149, 98
               

               
Conread position:
               
27-339
               

               
Cow position:
               
chr18:51367531-51367220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
295, 99
               

               
Conread position:
               
27-339
               

               
Cow position:
               
chr18:53636064-53635753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
27-372
               

               
Cow position:
               
chr18:42959740-42959397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
234, 99
               

               
Conread position:
               
27-396
               

               
Cow position:
               
chr18:42674753-42674387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
338, 90
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr18:40306317-40306713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
299, 99
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr18:41198311-41198707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
367, 99
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr18:43093354-43092958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
160, 91
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr18:50059055-50058659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
27-423
               

               
Cow position:
               
chr18:33093042-33092645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
154, 99
               

               
Conread position:
               
27-423
               

               
Cow position:
               
chr18:41197555-41197952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
252, 99
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr18:40086450-40086054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
330, 99
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr18:40324400-40324002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
172, 99
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr18:42960067-42959678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
257, 90
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr18:42985244-42984846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
235, 90
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr18:43022923-43022525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr18:52427697-52428095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
210, 99
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr18:52433046-52433444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
210, 99
               

               
Conread position:
               
27-425
               

               
Cow position:
               
chr18:41948696-41948299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
251, 90
               

               
Conread position:
               
27-427
               

               
Cow position:
               
chr18:42959815-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
318, 66
               

               
Conread position:
               
27-442
               

               
Cow position:
               
chr18:42985160-42984744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
163, 98
               

               
Conread position:
               
27-443
               

               
Cow position:
               
chr18:41948780-41948363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
317, 90
               

               
Conread position:
               
28-177
               

               
Cow position:
               
chr18:43119670-43119522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chr18:43053394-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr18:14453139-14452909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr18:42744064-42743834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr18:42984739-42984509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr18:43022250-43022020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr18:43119754-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-260
               

               
Cow position:
               
chr18:40324147-40323917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-263
               

               
Cow position:
               
chr18:53560579-53560809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
28-318
               

               
Cow position:
               
chr18:56247336-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
28-320
               

               
Cow position:
               
chr18:43174787-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
157, 98
               

               
Conread position:
               
28-331
               

               
Cow position:
               
chr18:44153967-44153671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
237, 67
               

               
Conread position:
               
28-344
               

               
Cow position:
               
chr18:44240494-44240809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
28-344
               

               
Cow position:
               
chr18:44397870-44397555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-347
               

               
Cow position:
               
chr18:43168193-43168511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
78, 74
               

               
Conread position:
               
28-358
               

               
Cow position:
               
chr18:53610066-53609737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-416
               

               
Cow position:
               
chr18:42675172-42674783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
240, 89
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:33064621-33064226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
233, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:40306738-40307133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:41198228-41198623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
344, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:42675004-42674609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
257, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:42675088-42674693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
364, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:42792037-42792432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
170, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:42985495-42985100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
165, 89
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:43048663-43048270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
228, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:43093521-43093126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
318, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:44398206-44397811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
317, 98
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:44398290-44397895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
366, 88
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:50083851-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr18:53635811-53635416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
214, 98
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr18:50099544-50099940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
149, 96
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr18:54967016-54967411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
240, 88
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr18:54967268-54967664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr18:55008708-55009104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:40086622-40086220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:43120090-43119693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:44184569-44184172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 82
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:44184905-44184508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 98
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:44398122-44397725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
157, 98
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:52427866-52428263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
209, 98
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:54979709-54980106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr18:55018029-55018426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
28-425
               

               
Cow position:
               
chr18:52433215-52433613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr18:40324567-40324167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
359, 98
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr18:41948863-41948463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
157, 89
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr18:43175459-43175059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
155, 98
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr18:44253574-44253187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
311, 89
               

               
Conread position:
               
28-428
               

               
Cow position:
               
chr18:40086281-40085889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
28-440
               

               
Cow position:
               
chr18:42791113-42791526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
28-441
               

               
Cow position:
               
chr18:44154218-44153811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
161, 90
               

               
Conread position:
               
28-442
               

               
Cow position:
               
chr18:43175543-43175128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
28-442
               

               
Cow position:
               
chr18:44184401-44183986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
161, 98
               

               
Conread position:
               
28-442
               

               
Cow position:
               
chr18:56329870-56329455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
165, 98
               

               
Conread position:
               
28-443
               

               
Cow position:
               
chr18:41197892-41198308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
28-443
               

               
Cow position:
               
chr18:42837871-42837455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
312, 98
               

               
Conread position:
               
28-443
               

               
Cow position:
               
chr18:43175039-43174623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
264, 89
               

               
Conread position:
               
28-444
               

               
Cow position:
               
chr18:42744652-42744235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
312, 98
               

               
Conread position:
               
28-445
               

               
Cow position:
               
chr18:44154134-44153723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
357, 89
               

               
Conread position:
               
29-250
               

               
Cow position:
               
chr18:54993558-54993778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
29-256
               

               
Cow position:
               
chr18:55008961-55009187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
29-259
               

               
Cow position:
               
chr18:40324230-40324001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
29-310
               

               
Cow position:
               
chr18:50271863-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
29-319
               

               
Cow position:
               
chr18:42792374-42792663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr18:56329533-56329220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
29-345
               

               
Cow position:
               
chr18:52011873-52011559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
157, 97
               

               
Conread position:
               
29-348
               

               
Cow position:
               
chr18:43174870-43174552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
151, 97
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr18:33064200-33063806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr18:52012293-52011899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
231, 97
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr18:56329617-56329223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
364, 97
               

               
Conread position:
               
29-423
               

               
Cow position:
               
chr18:14453954-14453559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
319, 89
               

               
Conread position:
               
29-423
               

               
Cow position:
               
chr18:44239823-44240218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
348, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:40086954-40086562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
217, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:41949114-41948718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 88
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:42984906-42984510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
154, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:42985326-42984930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
230, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:43093268-43092872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:43093604-43093208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
325, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:44240327-44240723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
249, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:49032812-49032416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:52012209-52011813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
170, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:52447678-52448074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
316, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:54979962-54980358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
224, 88
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr18:54993306-54993702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
224, 88
               

               
Conread position:
               
29-425
               

               
Cow position:
               
chr18:44253741-44253345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
259, 88
               

               
Conread position:
               
29-427
               

               
Cow position:
               
chr18:41948946-41948547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
364, 97
               

               
Conread position:
               
29-427
               

               
Cow position:
               
chr18:42744483-42744084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
29-427
               

               
Cow position:
               
chr18:43022753-43022354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
29-427
               

               
Cow position:
               
chr18:44253825-44253426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
164, 88
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr18:42959981-42959576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
368, 97
               

               
Conread position:
               
29-471
               

               
Cow position:
               
chr18:42675255-42674808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
349, 97
               

               
Conread position:
               
33-343
               

               
Cow position:
               
chr18:56247743-56247438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
33-422
               

               
Cow position:
               
chr18:43167944-43168336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
34-257
               

               
Cow position:
               
chr18:49022801-49023023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
120, 83
               

               
Conread position:
               
34-313
               

               
Cow position:
               
chr18:14453781-14453503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
209, 90
               

               
Conread position:
               
34-319
               

               
Cow position:
               
chr18:53526015-53526299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
34-320
               

               
Cow position:
               
chr18:55524051-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
34-339
               

               
Cow position:
               
chr18:43022328-43022024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
34-340
               

               
Cow position:
               
chr18:43048741-43048436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr18:49033311-49033005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
242, 92
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr18:1418241-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 104
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr18:49033143-49032835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 104
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr18:50048900-50048592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
287, 95
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr18:53586340-53586032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
34-416
               

               
Cow position:
               
chr18:42960312-42959929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
91, 104
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr18:40074926-40075315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
203, 91
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr18:56329948-56329559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
34-423
               

               
Cow position:
               
chr18:40324813-40324423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
320, 83
               

               
Conread position:
               
34-423
               

               
Cow position:
               
chr18:43175201-43174811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
360, 92
               

               
Conread position:
               
34-423
               

               
Cow position:
               
chr18:56316288-56316677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 83
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr18:43023084-43022693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr18:53525931-53526322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 104
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr18:56247574-56247191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
320, 58
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chr18:52447431-52447825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
336, 92
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chr18:56494083-56494477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 92
               

               
Conread position:
               
35-256
               

               
Cow position:
               
chr18:42837360-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
35-318
               

               
Cow position:
               
chr18:43168284-43168564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
35-339
               

               
Cow position:
               
chr18:42837444-42837141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
35-343
               

               
Cow position:
               
chr18:40306997-40307304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr18:14453216-14452856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
35-422
               

               
Cow position:
               
chr18:43093430-43093042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
260, 91
               

               
Conread position:
               
35-422
               

               
Cow position:
               
chr18:56316205-56316593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
35-423
               

               
Cow position:
               
chr18:44240081-44240470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
322, 92
               

               
Conread position:
               
35-424
               

               
Cow position:
               
chr18:33064362-33063972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
35-424
               

               
Cow position:
               
chr18:43022411-43022021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
148, 91
               

               
Conread position:
               
35-424
               

               
Cow position:
               
chr18:44398367-44397977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
36-342
               

               
Cow position:
               
chr18:56329190-56328885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 101
               

               
Conread position:
               
36-422
               

               
Cow position:
               
chr18:56330030-56329643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
36-427
               

               
Cow position:
               
chr18:42827394-42827785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
37-422
               

               
Cow position:
               
chr18:43093680-43093294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
307, 81
               

               
Conread position:
               
37-422
               

               
Cow position:
               
chr18:49033224-49032838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
155, 89
               

               
Conread position:
               
37-430
               

               
Cow position:
               
chr18:42960225-42959832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
353, 89
               

               
Conread position:
               
37-433
               

               
Cow position:
               
chr18:40306243-40306640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
360, 80
               

               
Conread position:
               
38-320
               

               
Cow position:
               
chr18:43094003-43093722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
38-339
               

               
Cow position:
               
chr18:42792215-42792515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
38-412
               

               
Cow position:
               
chr18:44154040-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
359, 69
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr18:44253325-44252946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
303, 88
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr18:33064023-33063638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr18:42791879-42792264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
235, 79
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr18:43167867-43168252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr18:49032635-49032250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 88
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr18:49032971-49032586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
240, 88
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr18:50848830-50849215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
241, 88
               

               
Conread position:
               
38-423
               

               
Cow position:
               
chr18:43022996-43022610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
223, 88
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr18:44154463-44154073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
79, 224
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr18:52428296-52428683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr18:52433477-52433864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr18:52447519-52447906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr18:53635717-53635330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
163, 88
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr18:56128448-56128835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
163, 88
               

               
Conread position:
               
38-425
               

               
Cow position:
               
chr18:52428044-52428432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
38-426
               

               
Cow position:
               
chr18:44154292-44153904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
250, 88
               

               
Conread position:
               
38-427
               

               
Cow position:
               
chr18:40306412-40306802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
145, 79
               

               
Conread position:
               
38-427
               

               
Cow position:
               
chr18:44184727-44184337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 79
               

               
Conread position:
               
38-427
               

               
Cow position:
               
chr18:51789230-51788840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
243, 88
               

               
Conread position:
               
41-334
               

               
Cow position:
               
chr18:50059209-50058917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
41-342
               

               
Cow position:
               
chr18:53560424-53560724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
41-390
               

               
Cow position:
               
chr18:50246491-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 85
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr18:42827482-42827864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr18:50246323-50246705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr18:53635966-53635584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
218, 85
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr18:56316127-56316509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
298, 85
               

               
Conread position:
               
41-423
               

               
Cow position:
               
chr18:40306667-40307050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
41-423
               

               
Cow position:
               
chr18:49033052-49032670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr18:52447270-52447654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 83
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr18:53509316-53509700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr18:54968032-54968416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr18:54980226-54980609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
41-425
               

               
Cow position:
               
chr18:43167786-43168171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 97
               

               
Conread position:
               
41-425
               

               
Cow position:
               
chr18:52012448-52012064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
42-424
               

               
Cow position:
               
chr18:42744722-42744339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
307, 75
               

               
Conread position:
               
44-419
               

               
Cow position:
               
chr18:44253894-44253518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
44-427
               

               
Cow position:
               
chr18:41949351-41948967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
217, 80
               

               
Conread position:
               
45-422
               

               
Cow position:
               
chr18:56247482-56247111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
45-424
               

               
Cow position:
               
chr18:42675491-42675111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
45-427
               

               
Cow position:
               
chr18:14453290-14452907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
349, 81
               

               
Conread position:
               
45-427
               

               
Cow position:
               
chr18:14454022-14453639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
316, 81
               

               
Conread position:
               
46-424
               

               
Cow position:
               
chr18:43094160-43093784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
276, 58
               

               
Conread position:
               
48-424
               

               
Cow position:
               
chr18:44398439-44398061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr18:56330185-56329811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
315, 75
               

               
Conread position:
               
49-427
               

               
Cow position:
               
chr18:40324882-40324503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
55-424
               

               
Cow position:
               
chr18:40086008-40085641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
205, 34
               

               
Conread position:
               
65-426
               

               
Cow position:
               
chr18:33093088-33092726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
112-422
               

               
Cow position:
               
chr18:56128102-56128413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
118-427
               

               
Cow position:
               
chr18:43093684-43093373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
158, 177
               

               
Conread position:
               
118-442
               

               
Cow position:
               
chr18:42837950-42837624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
155, 142
               

               
Conread position:
               
120-427
               

               
Cow position:
               
chr18:44154466-44154154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 38
               

               
Conread position:
               
126-422
               

               
Cow position:
               
chr18:53636050-53635752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
126-424
               

               
Cow position:
               
chr18:42985566-42985266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
235, 241
               

               
Conread position:
               
126-429
               

               
Cow position:
               
chr18:43048734-43048431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 134
               

               
Conread position:
               
127-423
               

               
Cow position:
               
chr18:42960304-42960006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 52
               

               
Conread position:
               
127-427
               

               
Cow position:
               
chr18:44184891-44184589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
131-427
               

               
Cow position:
               
chr18:56248160-56247863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
143, 129
               

               
Conread position:
               
131-443
               

               
Cow position:
               
chr18:42744718-42744404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 143
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr19:20677401-20677844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
8-423
               

               
Cow position:
               
chr19:14940119-14940533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
386, 10
               

               
Conread position:
               
10-423
               

               
Cow position:
               
chr19:20678082-20678496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 115
               

               
Conread position:
               
16-260
               

               
Cow position:
               
chr19:23614829-23615072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr19:20635412-20635005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
337, 101
               

               
Conread position:
               
16-427
               

               
Cow position:
               
chr19:23649439-23649851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
182, 110
               

               
Conread position:
               
16-431
               

               
Cow position:
               
chr19:20677668-20678085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 101
               

               
Conread position:
               
16-469
               

               
Cow position:
               
chr19:20678256-20678714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 101
               

               
Conread position:
               
17-422
               

               
Cow position:
               
chr19:20635663-20635257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
361, 101
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr19:20635579-20635171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 100
               

               
Conread position:
               
17-430
               

               
Cow position:
               
chr19:20678173-20678588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 25
               

               
Conread position:
               
25-407
               

               
Cow position:
               
chr19:23614754-23615135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
236, 99
               

               
Conread position:
               
27-385
               

               
Cow position:
               
chr19:14959178-14958827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
149, 57
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr19:23649870-23650270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
27-427
               

               
Cow position:
               
chr19:14940640-14941041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 87
               

               
Conread position:
               
28-381
               

               
Cow position:
               
chr19:23597346-23597698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
167, 98
               

               
Conread position:
               
28-392
               

               
Cow position:
               
chr19:14960242-14959881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
232, 96
               

               
Conread position:
               
28-416
               

               
Cow position:
               
chr19:23614253-23614642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
321, 89
               

               
Conread position:
               
28-421
               

               
Cow position:
               
chr19:20677596-20677990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 88
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr19:14940305-14940702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
249, 89
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr19:23597262-23597659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 98
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr19:23613413-23613810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 89
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr19:23614337-23614734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
28-425
               

               
Cow position:
               
chr19:23613833-23614231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
232, 89
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr19:23614505-23614904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
317, 98
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr19:14960410-14960012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
253, 89
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr19:14940054-14940448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr19:20677513-20677907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 88
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr19:23597095-23597489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
297, 97
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr19:23613918-23614312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr19:43570242-43569848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
326, 97
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr19:23649788-23650184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
214, 97
               

               
Conread position:
               
33-422
               

               
Cow position:
               
chr19:14960155-14959767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
295, 93
               

               
Conread position:
               
33-442
               

               
Cow position:
               
chr19:20678021-20678431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 93
               

               
Conread position:
               
34-330
               

               
Cow position:
               
chr19:23650129-23650424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
206, 92
               

               
Conread position:
               
34-381
               

               
Cow position:
               
chr19:43569985-43569643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
208, 92
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr19:23649625-23650014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
320, 92
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chr19:23613671-23614065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
35-310
               

               
Cow position:
               
chr19:23597437-23597711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
257, 91
               

               
Conread position:
               
35-423
               

               
Cow position:
               
chr19:14940228-14940617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
296, 91
               

               
Conread position:
               
35-431
               

               
Cow position:
               
chr19:20677771-20678168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 91
               

               
Conread position:
               
35-442
               

               
Cow position:
               
chr19:23614176-23614584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
293, 91
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr19:23613507-23613892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr19:20635471-20635089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
44-426
               

               
Cow position:
               
chr19:20635720-20635337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr19:23649388-23649762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 77
               

               
Conread position:
               
116-424
               

               
Cow position:
               
chr19:23613332-23613642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
122-392
               

               
Cow position:
               
chr19:14959579-14959309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-424
               

               
Cow position:
               
chr19:20677359-20677657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
132-427
               

               
Cow position:
               
chr19:14939988-14940285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 126
               

               
Conread position:
               
6-422
               

               
Cow position:
               
chr2:82799485-82799900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
325, 12
               

               
Conread position:
               
17-422
               

               
Cow position:
               
chr2:86465318-86465724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
158, 100
               

               
Conread position:
               
19-381
               

               
Cow position:
               
chr2:86465488-86465849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
107, 119
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr2:78754811-78755206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
148, 89
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr2:78754895-78755295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 110
               

               
Conread position:
               
28-472
               

               
Cow position:
               
chr2:78755231-78755677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
317, 96
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr2:86465419-86465808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
34-443
               

               
Cow position:
               
chr2:78754985-78755394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
254, 90
               

               
Conread position:
               
41-416
               

               
Cow position:
               
chr2:82800022-82800398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
290, 85
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr2:86465762-86466144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
240, 85
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr2:78755411-78755792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
356, 83
               

               
Conread position:
               
146-421
               

               
Cow position:
               
chr2:86465950-86466225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
27-343
               

               
Cow position:
               
chr21:34222990-34222675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
261, 99
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr22:11701137-11701472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:11666483-11666905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 102
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr22:14430186-14430608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 123
               

               
Conread position:
               
2-548
               

               
Cow position:
               
chr22:14468265-14468811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 6
               

               
Conread position:
               
3-430
               

               
Cow position:
               
chr22:14442082-14442510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 114
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr22:11640734-11641148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
169, 16
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr22:14468105-14468517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 9
               

               
Conread position:
               
11-334
               

               
Cow position:
               
chr22:12431104-12430783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
320, 7
               

               
Conread position:
               
13-441
               

               
Cow position:
               
chr22:12431860-12431432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
247, 104
               

               
Conread position:
               
16-422
               

               
Cow position:
               
chr22:14441927-14442334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
360, 101
               

               
Conread position:
               
16-423
               

               
Cow position:
               
chr22:14442263-14442668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
17-309
               

               
Cow position:
               
chr22:14442432-14442720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
17-320
               

               
Cow position:
               
chr22:14430622-14430924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
17-418
               

               
Cow position:
               
chr22:14430370-14430772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 107
               

               
Conread position:
               
17-426
               

               
Cow position:
               
chr22:14429782-14430192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
18-442
               

               
Cow position:
               
chr22:12458638-12458214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
224, 12
               

               
Conread position:
               
23-421
               

               
Cow position:
               
chr22:14467949-14468348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 101
               

               
Conread position:
               
24-425
               

               
Cow position:
               
chr22:14468034-14468436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 102
               

               
Conread position:
               
26-428
               

               
Cow position:
               
chr22:12431175-12430771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
150, 100
               

               
Conread position:
               
27-339
               

               
Cow position:
               
chr22:12499604-12499915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
229, 99
               

               
Conread position:
               
27-343
               

               
Cow position:
               
chr22:12475655-12475340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
149, 98
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr22:12399782-12399386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
318, 99
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr22:14430044-14430440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
237, 90
               

               
Conread position:
               
27-423
               

               
Cow position:
               
chr22:12499436-12499833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
27-427
               

               
Cow position:
               
chr22:46654075-46654476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
321, 97
               

               
Conread position:
               
27-431
               

               
Cow position:
               
chr22:14429960-14430365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
27-443
               

               
Cow position:
               
chr22:12475823-12475406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
28-339
               

               
Cow position:
               
chr22:12385521-12385209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr22:12431257-12430857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
28-443
               

               
Cow position:
               
chr22:12458209-12457793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
318, 89
               

               
Conread position:
               
28-484
               

               
Cow position:
               
chr22:12431593-12431134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
339, 98
               

               
Conread position:
               
29-340
               

               
Cow position:
               
chr22:12458124-12457814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
29-346
               

               
Cow position:
               
chr22:11641090-11641406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
29-397
               

               
Cow position:
               
chr22:12399108-12398741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
263, 88
               

               
Conread position:
               
29-401
               

               
Cow position:
               
chr22:14430550-14430921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
29-404
               

               
Cow position:
               
chr22:12385266-12384891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
293, 97
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr22:11640670-11641064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr22:11641006-11641400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
341, 97
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr22:12475905-12475511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
239, 97
               

               
Conread position:
               
29-423
               

               
Cow position:
               
chr22:12399696-12399301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
302, 87
               

               
Conread position:
               
29-424
               

               
Cow position:
               
chr22:14429710-14430106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 88
               

               
Conread position:
               
29-427
               

               
Cow position:
               
chr22:12399528-12399129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
369, 97
               

               
Conread position:
               
29-428
               

               
Cow position:
               
chr22:12432432-12432032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 81
               

               
Conread position:
               
29-431
               

               
Cow position:
               
chr22:14429878-14430282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
29-548
               

               
Cow position:
               
chr22:14442360-14442879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 95
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr22:12418958-12418569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
35-441
               

               
Cow position:
               
chr22:12430998-12430591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
37-339
               

               
Cow position:
               
chr22:46654253-46654554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
37-427
               

               
Cow position:
               
chr22:46654421-46654812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
284, 87
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr22:12458280-12457898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
43-422
               

               
Cow position:
               
chr22:14429640-14430020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
311, 83
               

               
Conread position:
               
46-427
               

               
Cow position:
               
chr22:12476140-12475758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
47-422
               

               
Cow position:
               
chr22:11640856-11641232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
65-413
               

               
Cow position:
               
chr22:12399828-12399479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
302, 61
               

               
Conread position:
               
137-427
               

               
Cow position:
               
chr22:12399841-12399549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
213, 224
               

               
Conread position:
               
138-427
               

               
Cow position:
               
chr22:46654017-46654308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
210, 218
               

               
Conread position:
               
147-431
               

               
Cow position:
               
chr22:14441889-14442176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
247, 0
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr23:24654076-24654324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr23:24626351-24626685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
255, 20
               

               
Conread position:
               
6-427
               

               
Cow position:
               
chr23:24560511-24560092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
254, 12
               

               
Conread position:
               
15-471
               

               
Cow position:
               
chr23:24522682-24522225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
379, 13
               

               
Conread position:
               
19-427
               

               
Cow position:
               
chr23:25660289-25660698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
26-258
               

               
Cow position:
               
chr23:24535732-24535501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
27-259
               

               
Cow position:
               
chr23:24626454-24626685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr23:24547268-24546872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr23:24639530-24639926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
365, 99
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr23:24639614-24640010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
322, 99
               

               
Conread position:
               
28-257
               

               
Cow position:
               
chr23:24546931-24546703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr23:24547015-24546707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
28-344
               

               
Cow position:
               
chr23:24639699-24640014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
29-339
               

               
Cow position:
               
chr23:25626346-25626652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr23:25626595-25626908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
29-443
               

               
Cow position:
               
chr23:24547182-24546767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
314, 97
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr23:25724058-25723692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr23:24535976-24535587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
367, 84
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr23:24560653-24560264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
360, 92
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr23:24560821-24560432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
359, 92
               

               
Conread position:
               
34-443
               

               
Cow position:
               
chr23:24560569-24560159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
333, 92
               

               
Conread position:
               
35-392
               

               
Cow position:
               
chr23:25660389-25660745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
238, 90
               

               
Conread position:
               
43-427
               

               
Cow position:
               
chr23:25660145-25660530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
43-496
               

               
Cow position:
               
chr23:24536051-24535586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
49-446
               

               
Cow position:
               
chr23:25626534-25626930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
233, 44
               

               
Conread position:
               
65-339
               

               
Cow position:
               
chr23:24654049-24654322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 52
               

               
Conread position:
               
126-427
               

               
Cow position:
               
chr23:24560814-24560511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
133-427
               

               
Cow position:
               
chr23:25698657-25698361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
252, 0
               

               
Conread position:
               
134-424
               

               
Cow position:
               
chr23:24547330-24547038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 134
               

               
Conread position:
               
143-422
               

               
Cow position:
               
chr23:24654042-24654323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
149, 133
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr24:17078032-17077636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
318, 99
               

               
Conread position:
               
27-424
               

               
Cow position:
               
chr24:17070604-17071002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
236, 99
               

               
Conread position:
               
27-427
               

               
Cow position:
               
chr24:17070520-17070921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
295, 99
               

               
Conread position:
               
29-263
               

               
Cow position:
               
chr24:17077778-17077545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
29-344
               

               
Cow position:
               
chr24:17070690-17071004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
211, 88
               

               
Conread position:
               
36-320
               

               
Cow position:
               
chr24:17035804-17035521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
225, 90
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr25:36801582-36801896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr25:34447315-34447649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr25:23420597-23420843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
18-337
               

               
Cow position:
               
chr25:33299539-33299853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
255, 99
               

               
Conread position:
               
27-259
               

               
Cow position:
               
chr25:34769475-34769244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
27-417
               

               
Cow position:
               
chr25:33299380-33299771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
171, 99
               

               
Conread position:
               
27-422
               

               
Cow position:
               
chr25:33299212-33299608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
28-339
               

               
Cow position:
               
chr25:34447420-34447728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-421
               

               
Cow position:
               
chr25:36800693-36801087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 110
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr25:23420445-23420840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
367, 98
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr25:34769726-34769329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
28-429
               

               
Cow position:
               
chr25:36800861-36801263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
245, 98
               

               
Conread position:
               
28-471
               

               
Cow position:
               
chr25:34770062-34769614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
326, 98
               

               
Conread position:
               
29-342
               

               
Cow position:
               
chr25:33127865-33128177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
29-419
               

               
Cow position:
               
chr25:34447001-34447392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
244, 97
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr25:33157410-33157016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
338, 97
               

               
Conread position:
               
34-320
               

               
Cow position:
               
chr25:33157069-33156785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
131, 92
               

               
Conread position:
               
34-339
               

               
Cow position:
               
chr25:33299051-33299355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
34-416
               

               
Cow position:
               
chr25:33298631-33299014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr25:23420367-23420756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
258, 92
               

               
Conread position:
               
34-424
               

               
Cow position:
               
chr25:33157237-33156846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
300, 92
               

               
Conread position:
               
34-431
               

               
Cow position:
               
chr25:33298883-33299277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
38-342
               

               
Cow position:
               
chr25:33127790-33128093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
138, 88
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr25:34769884-34769499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
316, 87
               

               
Conread position:
               
41-343
               

               
Cow position:
               
chr25:34769545-34769244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr25:34447181-34447565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
47-422
               

               
Cow position:
               
chr25:33157476-33157100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
320, 79
               

               
Conread position:
               
65-422
               

               
Cow position:
               
chr25:33127733-33128091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
333, 61
               

               
Conread position:
               
25-257
               

               
Cow position:
               
chr28:7758063-7758294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
25-417
               

               
Cow position:
               
chr28:9298627-9299016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
320, 39
               

               
Conread position:
               
27-423
               

               
Cow position:
               
chr28:7757477-7757873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr28:9253333-9253563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
28-339
               

               
Cow position:
               
chr28:9253249-9253559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr28:9290314-9290626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
294, 61
               

               
Conread position:
               
28-405
               

               
Cow position:
               
chr28:7810569-7810947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
275, 96
               

               
Conread position:
               
28-417
               

               
Cow position:
               
chr28:7810410-7810791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 110
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr28:7757562-7757957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
317, 88
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr28:7757898-7758293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
29-339
               

               
Cow position:
               
chr28:7758387-7758696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr28:9253082-9253476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr28:9290151-9290539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
34-423
               

               
Cow position:
               
chr28:7757652-7758042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
288, 90
               

               
Conread position:
               
46-339
               

               
Cow position:
               
chr28:9299217-9299509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
120-260
               

               
Cow position:
               
chr28:34679320-34679180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-256
               

               
Cow position:
               
chr29:39627103-39626886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
25-337
               

               
Cow position:
               
chr3:68027067-68027378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
278, 101
               

               
Conread position:
               
28-339
               

               
Cow position:
               
chr3:62722011-62721701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
28-382
               

               
Cow position:
               
chr3:68045999-68046352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
341, 98
               

               
Conread position:
               
28-391
               

               
Cow position:
               
chr3:62743075-62743432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr3:62722179-62721779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
365, 98
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr3:68045663-68046063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
155, 98
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr3:68045916-68046310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
247, 88
               

               
Conread position:
               
34-419
               

               
Cow position:
               
chr3:62722257-62721871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
316, 83
               

               
Conread position:
               
38-343
               

               
Cow position:
               
chr3:62721917-62721613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
52-422
               

               
Cow position:
               
chr3:62722323-62721952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
226, 65
               

               
Conread position:
               
138-424
               

               
Cow position:
               
chr3:62722322-62722034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
256, 0
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:42314246-42313927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
184, 125
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr4:42314664-42314244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
23-421
               

               
Cow position:
               
chr4:42314476-42314077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
168, 103
               

               
Conread position:
               
23-423
               

               
Cow position:
               
chr4:42314979-42314580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr4:42315308-42314915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
30-425
               

               
Cow position:
               
chr4:42315140-42314744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
168, 96
               

               
Conread position:
               
35-426
               

               
Cow position:
               
chr4:42314128-42313741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr6:49341222-49341465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
28-330
               

               
Cow position:
               
chr6:49340466-49340767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
250, 89
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr6:49340718-49341113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
29-342
               

               
Cow position:
               
chr6:49341055-49341367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr6:49340635-49341029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
33-443
               

               
Cow position:
               
chr6:49340387-49340798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
202, 91
               

               
Conread position:
               
34-422
               

               
Cow position:
               
chr6:49340892-49341281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
247, 90
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr6:49340983-49341369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
147, 83
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr7:8324936-8325358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr7:8325440-8325862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 117
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr7:8277799-8278226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 125
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr7:8277295-8277726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
330, 125
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr7:8324768-8325213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 117
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr7:8242840-8243256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
370, 118
               

               
Conread position:
               
7-431
               

               
Cow position:
               
chr7:8324858-8325284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr7:8325951-8326142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
8-385
               

               
Cow position:
               
chr7:8243764-8244137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
345, 116
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr7:8243009-8243423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 118
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr7:8278311-8278716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
130, 107
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr7:8325029-8325442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 99
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr7:8325701-8326114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 114
               

               
Conread position:
               
10-441
               

               
Cow position:
               
chr7:8325533-8325964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 114
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr7:11434440-11434231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
189, 105
               

               
Conread position:
               
13-404
               

               
Cow position:
               
chr7:8278231-8278619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
262, 103
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr7:8243432-8243847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
13-431
               

               
Cow position:
               
chr7:8243350-8243769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
15-427
               

               
Cow position:
               
chr7:8278065-8278476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 102
               

               
Conread position:
               
17-368
               

               
Cow position:
               
chr7:11434597-11434254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
17-420
               

               
Cow position:
               
chr7:8277899-8278303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
17-422
               

               
Cow position:
               
chr7:18390213-18390619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
337, 107
               

               
Conread position:
               
19-422
               

               
Cow position:
               
chr7:1014656-1015060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
216, 107
               

               
Conread position:
               
21-422
               

               
Cow position:
               
chr7:8277567-8277969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
87, 80
               

               
Conread position:
               
21-427
               

               
Cow position:
               
chr7:8325628-8326035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 96
               

               
Conread position:
               
21-431
               

               
Cow position:
               
chr7:11434677-11434272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
165, 105
               

               
Conread position:
               
23-422
               

               
Cow position:
               
chr7:8243611-8244009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 87
               

               
Conread position:
               
23-430
               

               
Cow position:
               
chr7:8325210-8325619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 101
               

               
Conread position:
               
25-423
               

               
Cow position:
               
chr7:1439866-1440264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 108
               

               
Conread position:
               
26-258
               

               
Cow position:
               
chr7:42878544-42878313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
211, 91
               

               
Conread position:
               
26-424
               

               
Cow position:
               
chr7:3179925-3180324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
252, 100
               

               
Conread position:
               
27-330
               

               
Cow position:
               
chr7:1014916-1015218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr7:1015253-1015452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
28-329
               

               
Cow position:
               
chr7:11601209-11600909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr7:1015085-1015399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
294, 98
               

               
Conread position:
               
28-375
               

               
Cow position:
               
chr7:8325803-8326149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 82
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr7:18390056-18390451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr7:18390392-18390787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
370, 89
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr7:42878962-42878567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
294, 96
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chr7:42879130-42878735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
250, 89
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr7:1014419-1014813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
350, 97
               

               
Conread position:
               
28-430
               

               
Cow position:
               
chr7:8325383-8325787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 74
               

               
Conread position:
               
28-447
               

               
Cow position:
               
chr7:8277658-8278077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 98
               

               
Conread position:
               
28-514
               

               
Cow position:
               
chr7:3180263-3180762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
316, 98
               

               
Conread position:
               
29-258
               

               
Cow position:
               
chr7:11600704-11600476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr7:1015002-1015396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
233, 97
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr7:11434753-11434362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
179, 97
               

               
Conread position:
               
29-469
               

               
Cow position:
               
chr7:1439533-1439978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
29-469
               

               
Cow position:
               
chr7:11600956-11600510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
365, 88
               

               
Conread position:
               
33-443
               

               
Cow position:
               
chr7:3179848-3180259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
252, 84
               

               
Conread position:
               
35-334
               

               
Cow position:
               
chr7:11600782-11600484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-422
               

               
Cow position:
               
chr7:3180438-3180824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
35-424
               

               
Cow position:
               
chr7:11601118-11600728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
233, 82
               

               
Conread position:
               
35-444
               

               
Cow position:
               
chr7:3180102-3180513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 91
               

               
Conread position:
               
38-337
               

               
Cow position:
               
chr7:42878700-42878402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
284, 86
               

               
Conread position:
               
38-339
               

               
Cow position:
               
chr7:1014261-1014561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr7:3180021-3180406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr7:42879204-42878819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
241, 86
               

               
Conread position:
               
41-441
               

               
Cow position:
               
chr7:8325312-8325712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 83
               

               
Conread position:
               
42-422
               

               
Cow position:
               
chr7:11434824-11434450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
166, 82
               

               
Conread position:
               
46-424
               

               
Cow position:
               
chr7:8277256-8277635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
308, 79
               

               
Conread position:
               
46-431
               

               
Cow position:
               
chr7:8324729-8325116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
55-497
               

               
Cow position:
               
chr7:8242804-8243258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
107-424
               

               
Cow position:
               
chr7:3179754-3180072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
291, 19
               

               
Conread position:
               
120-423
               

               
Cow position:
               
chr7:1014258-1014563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 140
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr8:45201563-45201898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr8:45200807-45201223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr8:46816267-46816583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
258, 106
               

               
Conread position:
               
25-422
               

               
Cow position:
               
chr8:45201245-45201643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
156, 99
               

               
Conread position:
               
27-416
               

               
Cow position:
               
chr8:55581303-55581693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
264, 99
               

               
Conread position:
               
27-427
               

               
Cow position:
               
chr8:48407401-48407000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
28-339
               

               
Cow position:
               
chr8:48407148-48406838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr8:45201416-45201730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 109
               

               
Conread position:
               
28-392
               

               
Cow position:
               
chr8:48407568-48407205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr8:45201080-45201476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
147, 96
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr8:48407484-48407087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
28-424
               

               
Cow position:
               
chr8:55581220-55581617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
239, 89
               

               
Conread position:
               
28-427
               

               
Cow position:
               
chr8:46816191-46816591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
28-442
               

               
Cow position:
               
chr8:48407316-48406901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
317, 96
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr8:46816108-46816502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
205, 89
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chr8:55580885-55581279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
365, 95
               

               
Conread position:
               
35-257
               

               
Cow position:
               
chr8:46817038-46817259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-423
               

               
Cow position:
               
chr8:46816618-46817007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
38-422
               

               
Cow position:
               
chr8:46816369-46816754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chr8:45201009-45201391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr8:46816960-46817344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr8:55580981-55581365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
353, 85
               

               
Conread position:
               
41-446
               

               
Cow position:
               
chr8:46816036-46816442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
41-490
               

               
Cow position:
               
chr8:46816540-46816992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr8:48407631-48407257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
50-392
               

               
Cow position:
               
chr8:48406706-48406365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
2-427
               

               
Cow position:
               
chrX:25325465-25325041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
273, 24
               

               
Conread position:
               
14-400
               

               
Cow position:
               
chrX:25310190-25310577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
105, 80
               

               
Conread position:
               
20-425
               

               
Cow position:
               
chrX:25325113-25324707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
346, 97
               

               
Conread position:
               
26-423
               

               
Cow position:
               
chrX:25309698-25310096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chrX:29044862-29044661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chrX:29044946-29044716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 74
               

               
Conread position:
               
28-339
               

               
Cow position:
               
chrX:12627753-12628061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
28-392
               

               
Cow position:
               
chrX:29045030-29044667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
245, 89
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chrX:12627333-12627726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 67
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chrX:25309952-25310347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
28-422
               

               
Cow position:
               
chrX:25325021-25324626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
245, 96
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chrX:12627667-12628063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
183, 89
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chrX:25309784-25310180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
253, 96
               

               
Conread position:
               
28-425
               

               
Cow position:
               
chrX:25324769-25324371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
370, 98
               

               
Conread position:
               
28-425
               

               
Cow position:
               
chrX:25325189-25324791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chrX:25325525-25325126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
29-422
               

               
Cow position:
               
chrX:25310037-25310431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
34-319
               

               
Cow position:
               
chrX:25310294-25310578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
35-422
               

               
Cow position:
               
chrX:29045107-29044719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
41-417
               

               
Cow position:
               
chrX:25309881-25310258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
157, 83
               

               
Conread position:
               
41-422
               

               
Cow position:
               
chrX:25324840-25324458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 66