Cow genome map
| Conread name: | Ss1.1-rret20_p23.5 |
| Conread position: | 155-304 |
| Cow position: | chr1:51883401-51883548 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 135 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 639-1025 |
| Cow position: | chr1:97580193-97580574 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 145 |
| Conread position: | 622-931 |
| Cow position: | chr10:42845066-42845386 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 635-1026 |
| Cow position: | chr10:46432122-46432519 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 152 |
| Conread position: | 668-781 |
| Cow position: | chr10:4503074-4502962 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 699-903 |
| Cow position: | chr11:39324071-39323856 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 124, 87 |
| Conread position: | 1-308 |
| Cow position: | chr14:39718327-39718636 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 71 |
| Conread position: | 328-563 |
| Cow position: | chr14:39718680-39718925 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 560-1026 |
| Cow position: | chr14:39718951-39719431 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 155-289 |
| Cow position: | chr15:16258563-16258697 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 131 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 946-1026 |
| Cow position: | chr15:16258691-16258771 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 77 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 155-289 |
| Cow position: | chr18:25026845-25026713 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 155-289 |
| Cow position: | chr18:38070639-38070503 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 176-289 |
| Cow position: | chr18:28114137-28114022 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 652-1026 |
| Cow position: | chr18:23111-23497 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 134 |
| Conread position: | 652-842 |
| Cow position: | chr19:14372563-14372373 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 177, 132 |
| Conread position: | 156-273 |
| Cow position: | chr2:58562917-58562800 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 97 |
| Conread position: | 652-798 |
| Cow position: | chr2:14331792-14331937 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 157-287 |
| Cow position: | chr23:25059034-25058908 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 172-289 |
| Cow position: | chr5:70463655-70463538 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 113 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 155-289 |
| Cow position: | chr7:1782697-1782561 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 949-1026 |
| Cow position: | chr7:1782564-1782487 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 71 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 651-929 |
| Cow position: | chr8:52778472-52778761 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 133 |