Cow genome map

Conread name: Ss1.1-rret22_a12.5

Conread position: 5-572
Cow position: chr1:75414651-75415209 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 55

Conread position: 515-680
Cow position: chr1:19384210-19384384 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 523-680
Cow position: chr1:80423495-80423660 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 531-681
Cow position: chr1:5596983-5597140 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 532-680
Cow position: chr1:50930749-50930907 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 535-680
Cow position: chr1:24132838-24132991 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 8

Conread position: 535-680
Cow position: chr1:50906455-50906608 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 535-680
Cow position: chr1:61005332-61005491 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 535-680
Cow position: chr1:69378373-69378527 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 128

Conread position: 536-680
Cow position: chr1:30028009-30028160 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 8

Conread position: 538-680
Cow position: chr1:23101898-23101747 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 538-680
Cow position: chr1:81615871-81615726 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 22

Conread position: 539-674
Cow position: chr1:99221413-99221555 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 540-678
Cow position: chr1:102768396-102768251 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 544-680
Cow position: chr1:83072656-83072513 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 21

Conread position: 545-680
Cow position: chr1:32035498-32035638 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 545-680
Cow position: chr1:99604977-99605115 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 89

Conread position: 546-679
Cow position: chr1:78066329-78066464 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 90

Conread position: 546-679
Cow position: chr1:90621292-90621432 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr1:3033994-3034127 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 76

Conread position: 546-680
Cow position: chr1:42775119-42774982 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 16

Conread position: 546-680
Cow position: chr1:70476539-70476679 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 114

Conread position: 546-680
Cow position: chr1:78811252-78811110 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr1:84811727-84811867 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 99

Conread position: 547-678
Cow position: chr1:54267724-54267865 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 547-678
Cow position: chr1:81568816-81568954 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 547-678
Cow position: chr1:100852914-100852783 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 13

Conread position: 547-680
Cow position: chr1:41027286-41027146 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 102

Conread position: 547-680
Cow position: chr1:67654112-67654248 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 97

Conread position: 547-680
Cow position: chr1:88913533-88913391 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 548-661
Cow position: chr1:87988981-87989100 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 0

Conread position: 548-678
Cow position: chr1:82538140-82538002 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 548-680
Cow position: chr1:86110533-86110672 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 549-680
Cow position: chr1:79630708-79630844 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 95

Conread position: 550-678
Cow position: chr1:98742226-98742091 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 550-680
Cow position: chr1:41137938-41138072 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 90

Conread position: 550-680
Cow position: chr1:73960895-73960772 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 16

Conread position: 550-680
Cow position: chr1:79169943-79170081 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 551-672
Cow position: chr1:53521114-53520995 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-678
Cow position: chr1:56107129-56107263 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr1:48618038-48618172 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 69

Conread position: 551-680
Cow position: chr1:50585667-50585804 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 551-680
Cow position: chr1:81481173-81481310 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 86

Conread position: 551-680
Cow position: chr1:92197663-92197525 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chr1:92578625-92578761 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-681
Cow position: chr1:3923595-3923729 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 72

Conread position: 551-694
Cow position: chr1:43052293-43052442 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 135

Conread position: 552-680
Cow position: chr1:55685770-55685906 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 552-680
Cow position: chr1:62469266-62469132 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 95

Conread position: 552-680
Cow position: chr1:64302042-64302171 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 87

Conread position: 552-680
Cow position: chr1:75745068-75744934 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 553-680
Cow position: chr1:4512177-4512055 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 19

Conread position: 553-680
Cow position: chr1:25383876-25383740 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 553-680
Cow position: chr1:39095692-39095560 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 553-680
Cow position: chr1:56618449-56618583 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 553-680
Cow position: chr1:70483128-70483262 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 554-679
Cow position: chr1:93590384-93590513 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 554-680
Cow position: chr1:42887074-42887205 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 80

Conread position: 554-680
Cow position: chr1:55705041-55705171 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 554-680
Cow position: chr1:64572720-64572587 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 554-680
Cow position: chr1:68817595-68817727 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 555-680
Cow position: chr1:30949187-30949063 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 76

Conread position: 555-680
Cow position: chr1:53457017-53456882 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 555-680
Cow position: chr1:56225671-56225541 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 41, 0

Conread position: 555-680
Cow position: chr1:89388548-89388416 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 0

Conread position: 558-681
Cow position: chr1:89449100-89448971 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 25, 55

Conread position: 559-680
Cow position: chr1:51968728-51968609 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 73

Conread position: 791-994
Cow position: chr1:75415792-75415999 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 77

Conread position: 520-678
Cow position: chr10:37507941-37508105 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 127

Conread position: 525-678
Cow position: chr10:50558727-50558880 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 21

Conread position: 525-678
Cow position: chr10:58065982-58066145 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 531-680
Cow position: chr10:57095005-57095158 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 136

Conread position: 535-680
Cow position: chr10:282395-282248 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 62

Conread position: 535-680
Cow position: chr10:14947448-14947297 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 118

Conread position: 536-677
Cow position: chr10:34903667-34903521 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 110

Conread position: 536-680
Cow position: chr10:40999051-40998900 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 536-680
Cow position: chr10:58651001-58651147 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 9

Conread position: 537-680
Cow position: chr10:21348804-21348946 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 14

Conread position: 538-674
Cow position: chr10:45371249-45371104 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 538-678
Cow position: chr10:47543262-47543120 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 57

Conread position: 538-680
Cow position: chr10:48316129-48316269 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 95

Conread position: 539-678
Cow position: chr10:35731337-35731483 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 546-680
Cow position: chr10:10104963-10104823 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 94

Conread position: 546-680
Cow position: chr10:41676231-41676367 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 88

Conread position: 546-680
Cow position: chr10:61509763-61509901 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 91

Conread position: 547-677
Cow position: chr10:58451198-58451329 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 90

Conread position: 547-680
Cow position: chr10:23346124-23346261 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 97

Conread position: 548-678
Cow position: chr10:15817616-15817750 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 548-680
Cow position: chr10:19191934-19191796 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 14

Conread position: 549-678
Cow position: chr10:10120369-10120238 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 38

Conread position: 549-680
Cow position: chr10:6242342-6242471 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 81

Conread position: 550-678
Cow position: chr10:47785106-47785240 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 550-680
Cow position: chr10:18751296-18751433 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 551-679
Cow position: chr10:22390776-22390640 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 551-680
Cow position: chr10:9575870-9576006 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr10:13764985-13765122 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 551-680
Cow position: chr10:24756587-24756454 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chr10:37415962-37415832 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 94

Conread position: 551-680
Cow position: chr10:46327869-46327733 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr10:49029827-49029694 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 93

Conread position: 552-680
Cow position: chr10:23478762-23478887 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 552-680
Cow position: chr10:49862641-49862509 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 82

Conread position: 552-716
Cow position: chr10:991833-991996 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 78, 45

Conread position: 553-674
Cow position: chr10:14093073-14093199 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 553-675
Cow position: chr10:27178663-27178539 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 90

Conread position: 553-680
Cow position: chr10:25475709-25475575 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 554-705
Cow position: chr10:32440378-32440214 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 555-680
Cow position: chr10:13350032-13350167 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 555-680
Cow position: chr10:37425963-37426091 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 77

Conread position: 555-680
Cow position: chr10:65904415-65904286 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 16

Conread position: 556-680
Cow position: chr10:10634386-10634261 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 68

Conread position: 556-680
Cow position: chr10:54848952-54848820 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 559-680
Cow position: chr10:2857218-2857089 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 564-686
Cow position: chr10:38266944-38266818 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 515-680
Cow position: chr11:35669744-35669903 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 523-680
Cow position: chr11:42206630-42206470 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 73, 9

Conread position: 530-680
Cow position: chr11:44032212-44032060 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 15

Conread position: 536-678
Cow position: chr11:55053064-55052922 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 10

Conread position: 536-680
Cow position: chr11:8437488-8437645 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 536-680
Cow position: chr11:42067064-42066913 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 9

Conread position: 538-680
Cow position: chr11:83926231-83926091 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 48

Conread position: 539-678
Cow position: chr11:64096468-64096615 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 545-678
Cow position: chr11:34279929-34279793 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 49

Conread position: 546-671
Cow position: chr11:22583142-22583018 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 14

Conread position: 546-672
Cow position: chr11:6154762-6154627 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 546-679
Cow position: chr11:62812760-62812900 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 546-680
Cow position: chr11:54872569-54872712 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 546-680
Cow position: chr11:63484131-63483991 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 16

Conread position: 547-679
Cow position: chr11:30986827-30986688 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 547-680
Cow position: chr11:50152622-50152765 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 547-680
Cow position: chr11:63998899-63999043 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 548-676
Cow position: chr11:30830433-30830561 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 34

Conread position: 548-680
Cow position: chr11:48296215-48296079 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 548-680
Cow position: chr11:69676165-69676300 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 101

Conread position: 549-680
Cow position: chr11:62789316-62789179 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 88

Conread position: 550-680
Cow position: chr11:30192366-30192227 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 550-680
Cow position: chr11:36182879-36182743 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 551-678
Cow position: chr11:64335017-64334887 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 83

Conread position: 551-679
Cow position: chr11:46922700-46922836 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-679
Cow position: chr11:80296672-80296803 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 81

Conread position: 551-679
Cow position: chr11:83043180-83043313 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 89

Conread position: 551-680
Cow position: chr11:4653073-4653206 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 82

Conread position: 551-680
Cow position: chr11:15591293-15591426 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 83

Conread position: 551-680
Cow position: chr11:30494175-30494043 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 116

Conread position: 551-680
Cow position: chr11:31228140-31228011 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 27

Conread position: 551-680
Cow position: chr11:32586939-32587075 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr11:40818446-40818578 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 17

Conread position: 551-680
Cow position: chr11:44223068-44222934 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 92

Conread position: 551-680
Cow position: chr11:63977242-63977106 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr11:82732963-82733101 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 90

Conread position: 551-696
Cow position: chr11:34233630-34233484 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 89

Conread position: 551-703
Cow position: chr11:18154370-18154529 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 95

Conread position: 552-680
Cow position: chr11:3175854-3175722 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 552-680
Cow position: chr11:52297037-52297172 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 83

Conread position: 552-680
Cow position: chr11:80923140-80923275 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 553-679
Cow position: chr11:83323762-83323628 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 553-680
Cow position: chr11:35536760-35536635 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 554-680
Cow position: chr11:30172483-30172353 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 80

Conread position: 555-680
Cow position: chr11:21886013-21885881 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 555-680
Cow position: chr11:25721822-25721948 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 78

Conread position: 555-680
Cow position: chr11:35212987-35213119 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 555-680
Cow position: chr11:67615069-67615198 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 555-680
Cow position: chr11:74839786-74839659 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 73

Conread position: 558-681
Cow position: chr11:66104213-66104342 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 76

Conread position: 519-680
Cow position: chr12:25561564-25561397 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 116

Conread position: 525-680
Cow position: chr12:1952612-1952774 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 117

Conread position: 534-673
Cow position: chr12:42622887-42623035 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 535-680
Cow position: chr12:2964227-2964075 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 536-681
Cow position: chr12:14986927-14986776 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 117

Conread position: 538-679
Cow position: chr12:9766703-9766848 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 546-680
Cow position: chr12:18582830-18582965 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 14

Conread position: 546-680
Cow position: chr12:29180844-29180703 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 546-681
Cow position: chr12:4594669-4594533 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 40, 111

Conread position: 547-680
Cow position: chr12:7884510-7884653 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 547-680
Cow position: chr12:15151707-15151841 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 21

Conread position: 547-680
Cow position: chr12:18123835-18123697 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 102

Conread position: 547-680
Cow position: chr12:22859619-22859491 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 547-680
Cow position: chr12:25528393-25528532 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 547-680
Cow position: chr12:26217658-26217796 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 99

Conread position: 548-680
Cow position: chr12:7902637-7902771 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 87

Conread position: 549-677
Cow position: chr12:38196352-38196220 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 551-680
Cow position: chr12:18518837-18518701 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 551-680
Cow position: chr12:38679213-38679077 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-681
Cow position: chr12:37169784-37169919 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 58

Conread position: 552-680
Cow position: chr12:11836392-11836262 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 91

Conread position: 552-680
Cow position: chr12:41159745-41159615 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 42

Conread position: 553-677
Cow position: chr12:18551293-18551166 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 90

Conread position: 553-680
Cow position: chr12:30806016-30805886 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 555-678
Cow position: chr12:20637377-20637507 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 555-680
Cow position: chr12:18978847-18978715 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 558-680
Cow position: chr12:33851514-33851385 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 558-681
Cow position: chr12:35669314-35669436 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 71

Conread position: 559-679
Cow position: chr12:3579641-3579513 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 559-680
Cow position: chr12:33949057-33948932 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 86

Conread position: 512-660
Cow position: chr13:15061745-15061592 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 35

Conread position: 517-680
Cow position: chr13:57322901-57323065 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 28

Conread position: 531-680
Cow position: chr13:25313389-25313230 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 130

Conread position: 533-679
Cow position: chr13:25061948-25062094 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 91

Conread position: 534-680
Cow position: chr13:19393060-19393211 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 534-680
Cow position: chr13:37405479-37405630 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 34

Conread position: 536-680
Cow position: chr13:54582644-54582793 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 9

Conread position: 537-680
Cow position: chr13:18058478-18058331 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 107

Conread position: 539-680
Cow position: chr13:47651643-47651497 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 19

Conread position: 545-680
Cow position: chr13:20440838-20440694 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 545-680
Cow position: chr13:37614421-37614277 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 546-680
Cow position: chr13:37555093-37554954 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 102

Conread position: 546-680
Cow position: chr13:53619778-53619923 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 547-680
Cow position: chr13:6189821-6189681 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 547-680
Cow position: chr13:14063741-14063602 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 13

Conread position: 548-675
Cow position: chr13:54701961-54702095 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 548-680
Cow position: chr13:52477865-52477727 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 35, 83

Conread position: 548-728
Cow position: chr13:30809594-30809409 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 12

Conread position: 549-680
Cow position: chr13:20534681-20534815 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 112

Conread position: 549-680
Cow position: chr13:23478681-23478821 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 550-680
Cow position: chr13:11231515-11231375 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 550-680
Cow position: chr13:18491389-18491515 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 550-680
Cow position: chr13:28439198-28439328 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 39

Conread position: 550-680
Cow position: chr13:60375706-60375566 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 550-683
Cow position: chr13:46330157-46330014 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr13:13320580-13320716 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr13:17815027-17815157 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 104

Conread position: 551-680
Cow position: chr13:23667040-23667172 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 551-680
Cow position: chr13:25817312-25817446 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 86

Conread position: 551-680
Cow position: chr13:41806559-41806691 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 552-678
Cow position: chr13:42200404-42200536 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 77

Conread position: 552-679
Cow position: chr13:51528654-51528520 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 43

Conread position: 552-680
Cow position: chr13:14782132-14782261 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 78

Conread position: 552-680
Cow position: chr13:21170312-21170445 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 82

Conread position: 552-680
Cow position: chr13:33854897-33854765 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 552-680
Cow position: chr13:38035623-38035757 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 88

Conread position: 552-680
Cow position: chr13:45073462-45073335 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 78

Conread position: 553-680
Cow position: chr13:1462506-1462373 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 9

Conread position: 553-680
Cow position: chr13:21981185-21981055 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 79

Conread position: 553-680
Cow position: chr13:41474660-41474791 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 554-679
Cow position: chr13:21288299-21288167 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 555-679
Cow position: chr13:27198701-27198826 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 75

Conread position: 555-680
Cow position: chr13:19007730-19007854 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 558-680
Cow position: chr13:55494729-55494607 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 79

Conread position: 559-680
Cow position: chr13:15257576-15257448 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 559-680
Cow position: chr13:15289128-15289002 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 75

Conread position: 559-680
Cow position: chr13:20784385-20784509 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 77

Conread position: 560-680
Cow position: chr13:23399558-23399685 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 525-680
Cow position: chr14:24746271-24746442 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 11

Conread position: 534-680
Cow position: chr14:11643422-11643273 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 24

Conread position: 536-680
Cow position: chr14:19633069-19633204 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 546-680
Cow position: chr14:21535469-21535330 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 91

Conread position: 549-680
Cow position: chr14:41156883-41156748 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 551-678
Cow position: chr14:9307905-9308039 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 552-680
Cow position: chr14:36151164-36151301 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 553-678
Cow position: chr14:22988876-22989008 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 555-680
Cow position: chr14:15228388-15228516 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 11

Conread position: 555-681
Cow position: chr14:21357400-21357535 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 570-680
Cow position: chr14:42596267-42596376 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 487-680
Cow position: chr15:47844261-47844070 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 30

Conread position: 493-664
Cow position: chr15:30983962-30983795 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 139, 49

Conread position: 495-680
Cow position: chr15:21903579-21903387 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 525-680
Cow position: chr15:27976013-27975848 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 43

Conread position: 532-680
Cow position: chr15:2931700-2931544 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 11

Conread position: 536-673
Cow position: chr15:16492325-16492471 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 536-678
Cow position: chr15:19002413-19002259 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 537-681
Cow position: chr15:14505315-14505457 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 43

Conread position: 539-679
Cow position: chr15:13513408-13513554 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 105

Conread position: 539-680
Cow position: chr15:9128794-9128648 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 98

Conread position: 546-680
Cow position: chr15:8331317-8331179 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 61

Conread position: 546-680
Cow position: chr15:41475946-41475807 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 95

Conread position: 547-680
Cow position: chr15:47920265-47920127 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 99

Conread position: 548-680
Cow position: chr15:34223750-34223889 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 550-662
Cow position: chr15:13612479-13612590 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 39

Conread position: 551-678
Cow position: chr15:22553655-22553520 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 96

Conread position: 551-680
Cow position: chr15:26158713-26158573 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 551-680
Cow position: chr15:26849646-26849514 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 91

Conread position: 551-680
Cow position: chr15:28098998-28099135 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 551-680
Cow position: chr15:36353552-36353691 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 552-678
Cow position: chr15:25208872-25208736 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 553-680
Cow position: chr15:11909059-11908923 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 553-680
Cow position: chr15:14576219-14576351 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 9

Conread position: 554-680
Cow position: chr15:848536-848666 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 554-680
Cow position: chr15:51558293-51558425 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 79

Conread position: 555-682
Cow position: chr15:36846297-36846158 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 558-680
Cow position: chr15:244675-244804 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 505-680
Cow position: chr16:11584161-11584338 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 38

Conread position: 524-656
Cow position: chr16:30036465-30036330 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 8

Conread position: 525-678
Cow position: chr16:26649405-26649560 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 34

Conread position: 525-680
Cow position: chr16:34506579-34506418 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 111

Conread position: 534-677
Cow position: chr16:16354141-16354286 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 100

Conread position: 534-680
Cow position: chr16:8738290-8738132 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 535-678
Cow position: chr16:13306654-13306803 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 22

Conread position: 538-680
Cow position: chr16:7418588-7418445 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 19

Conread position: 546-680
Cow position: chr16:12324663-12324522 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 547-678
Cow position: chr16:31149583-31149446 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 105

Conread position: 548-679
Cow position: chr16:13689869-13689734 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 12

Conread position: 548-680
Cow position: chr16:8461875-8462016 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 549-680
Cow position: chr16:20824683-20824544 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 550-680
Cow position: chr16:19496814-19496952 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 551-678
Cow position: chr16:23681565-23681431 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr16:31011532-31011394 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr16:45678181-45678045 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 552-679
Cow position: chr16:35476938-35477068 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 84

Conread position: 552-679
Cow position: chr16:49733942-49734078 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 552-680
Cow position: chr16:19478565-19478698 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 553-680
Cow position: chr16:23515564-23515699 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 554-678
Cow position: chr16:46433123-46433256 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 559-680
Cow position: chr16:48095573-48095698 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 78

Conread position: 484-680
Cow position: chr17:24824554-24824349 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 112, 24

Conread position: 531-678
Cow position: chr17:25511507-25511353 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 116

Conread position: 532-680
Cow position: chr17:35043672-35043818 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 49

Conread position: 536-679
Cow position: chr17:20932585-20932439 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 21

Conread position: 536-680
Cow position: chr17:20071844-20071992 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 538-680
Cow position: chr17:24587880-24587731 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 538-691
Cow position: chr17:30501556-30501715 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 546-660
Cow position: chr17:20930551-20930431 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 14

Conread position: 546-678
Cow position: chr17:24612895-24612759 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 90

Conread position: 546-679
Cow position: chr17:20836340-20836198 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 546-680
Cow position: chr17:25473031-25473173 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 547-678
Cow position: chr17:29084416-29084283 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 84

Conread position: 547-678
Cow position: chr17:32418869-32419007 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 547-680
Cow position: chr17:10016525-10016386 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 110

Conread position: 547-680
Cow position: chr17:32332844-32332984 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 549-679
Cow position: chr17:21718751-21718889 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 549-680
Cow position: chr17:9824914-9824776 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 99

Conread position: 549-680
Cow position: chr17:21003585-21003722 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 124

Conread position: 549-680
Cow position: chr17:21489388-21489518 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 39

Conread position: 549-680
Cow position: chr17:27606759-27606624 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 96

Conread position: 549-680
Cow position: chr17:33154912-33155048 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 81

Conread position: 551-678
Cow position: chr17:8948723-8948855 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 551-678
Cow position: chr17:32989717-32989585 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 551-678
Cow position: chr17:32993383-32993515 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 551-680
Cow position: chr17:946600-946464 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr17:8809264-8809398 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 95

Conread position: 551-680
Cow position: chr17:17782295-17782162 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 11

Conread position: 551-680
Cow position: chr17:21039800-21039664 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 551-680
Cow position: chr17:22051347-22051483 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr17:22223958-22223822 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr17:25128110-25128246 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 551-680
Cow position: chr17:33164576-33164712 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 552-678
Cow position: chr17:6318625-6318758 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 552-680
Cow position: chr17:24883327-24883464 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 552-680
Cow position: chr17:36791367-36791233 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 552-680
Cow position: chr17:39606665-39606537 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 75

Conread position: 552-684
Cow position: chr17:37340788-37340928 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 554-680
Cow position: chr17:4679967-4680102 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 556-680
Cow position: chr17:9260372-9260505 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 558-680
Cow position: chr17:27303743-27303862 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 560-680
Cow position: chr17:40276971-40276847 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 22

Conread position: 530-680
Cow position: chr18:48407923-48407772 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 82

Conread position: 536-680
Cow position: chr18:37804814-37804672 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 10

Conread position: 538-680
Cow position: chr18:56361203-56361348 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 96

Conread position: 546-676
Cow position: chr18:47824599-47824736 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr18:17390815-17390961 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr18:18520627-18520768 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 16

Conread position: 546-680
Cow position: chr18:22568893-22569033 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 98

Conread position: 547-679
Cow position: chr18:17007311-17007446 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 13

Conread position: 548-680
Cow position: chr18:11867512-11867373 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 97

Conread position: 549-680
Cow position: chr18:18844183-18844049 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 51

Conread position: 549-680
Cow position: chr18:45903724-45903864 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 550-678
Cow position: chr18:38937991-38937856 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 550-680
Cow position: chr18:6818496-6818630 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 43

Conread position: 551-676
Cow position: chr18:9974160-9974291 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 106

Conread position: 551-678
Cow position: chr18:21195177-21195300 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 551-678
Cow position: chr18:50004536-50004670 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr18:10977045-10977178 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chr18:25598063-25598199 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 551-680
Cow position: chr18:34444567-34444703 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr18:49602872-49603010 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr18:51383228-51383364 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-723
Cow position: chr18:7650145-7649976 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 35

Conread position: 552-680
Cow position: chr18:28657750-28657878 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 25

Conread position: 553-680
Cow position: chr18:1571071-1571204 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 82

Conread position: 555-678
Cow position: chr18:14225554-14225429 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 76

Conread position: 555-680
Cow position: chr18:4907310-4907180 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 555-680
Cow position: chr18:22180615-22180744 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 85

Conread position: 555-680
Cow position: chr18:44205928-44206051 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 76

Conread position: 558-679
Cow position: chr18:33159106-33158976 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 560-680
Cow position: chr18:35534989-35535113 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 85

Conread position: 563-680
Cow position: chr18:28322811-28322690 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 84

Conread position: 513-680
Cow position: chr19:15853154-15852982 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 32

Conread position: 517-680
Cow position: chr19:31768407-31768575 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 26

Conread position: 522-680
Cow position: chr19:47772713-47772873 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 64

Conread position: 530-680
Cow position: chr19:34420623-34420464 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 538-690
Cow position: chr19:20092756-20092916 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 539-680
Cow position: chr19:25572976-25572826 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 546-677
Cow position: chr19:7637036-7637177 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 103

Conread position: 546-680
Cow position: chr19:15887119-15887265 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 546-680
Cow position: chr19:17972072-17972208 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 20

Conread position: 546-680
Cow position: chr19:49221424-49221566 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 547-680
Cow position: chr19:39384852-39384986 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 13

Conread position: 547-680
Cow position: chr19:55583732-55583588 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 547-681
Cow position: chr19:49290262-49290403 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 548-680
Cow position: chr19:23378872-23378731 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 549-679
Cow position: chr19:49959063-49958926 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 17

Conread position: 550-678
Cow position: chr19:22765805-22765678 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 72

Conread position: 551-673
Cow position: chr19:22043165-22043294 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr19:7668887-7668749 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr19:33903234-33903371 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr19:37466869-37467006 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr19:40126973-40127111 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr19:46822901-46822764 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 124

Conread position: 553-680
Cow position: chr19:19174706-19174573 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 554-680
Cow position: chr19:24693193-24693063 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 554-680
Cow position: chr19:47184891-47185027 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 555-680
Cow position: chr19:22871068-22871200 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 555-680
Cow position: chr19:43413967-43413838 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 85

Conread position: 568-678
Cow position: chr19:33988244-33988126 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 513-680
Cow position: chr2:51023961-51024133 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 67

Conread position: 517-680
Cow position: chr2:28873126-28872959 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 19

Conread position: 525-678
Cow position: chr2:43995160-43995005 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 107

Conread position: 526-680
Cow position: chr2:65988321-65988165 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 532-680
Cow position: chr2:38965833-38965684 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 93

Conread position: 536-679
Cow position: chr2:58153921-58153772 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 10

Conread position: 537-680
Cow position: chr2:46164283-46164434 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 538-680
Cow position: chr2:43591157-43591306 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 538-694
Cow position: chr2:29806311-29806148 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 539-680
Cow position: chr2:31784144-31783996 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 540-680
Cow position: chr2:64465565-64465709 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 546-678
Cow position: chr2:2673739-2673600 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr2:1205515-1205371 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 546-680
Cow position: chr2:5604729-5604591 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 546-680
Cow position: chr2:14884449-14884308 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr2:17966834-17966962 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 546-680
Cow position: chr2:21049127-21049263 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 14

Conread position: 546-680
Cow position: chr2:40703462-40703599 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 113

Conread position: 546-680
Cow position: chr2:41452441-41452300 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 14

Conread position: 546-680
Cow position: chr2:46967990-46968125 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 14

Conread position: 547-680
Cow position: chr2:18997924-18997786 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 87

Conread position: 547-682
Cow position: chr2:13672723-13672586 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 100

Conread position: 548-680
Cow position: chr2:11435491-11435353 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 96

Conread position: 548-680
Cow position: chr2:46129960-46130093 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 12

Conread position: 548-681
Cow position: chr2:46312643-46312506 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 549-678
Cow position: chr2:46162158-46162026 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 95

Conread position: 549-680
Cow position: chr2:44051514-44051375 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 549-680
Cow position: chr2:44065771-44065638 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 87

Conread position: 549-680
Cow position: chr2:63250207-63250340 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 92

Conread position: 551-674
Cow position: chr2:55660927-55660799 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 95

Conread position: 551-678
Cow position: chr2:85460126-85459994 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 551-679
Cow position: chr2:19137687-19137822 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 551-679
Cow position: chr2:77140378-77140512 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 72

Conread position: 551-680
Cow position: chr2:43577575-43577711 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr2:46120441-46120575 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 83

Conread position: 551-680
Cow position: chr2:80275089-80275227 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 552-678
Cow position: chr2:33603587-33603455 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 95

Conread position: 552-680
Cow position: chr2:19494417-19494281 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 552-680
Cow position: chr2:53650218-53650091 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 108

Conread position: 552-680
Cow position: chr2:71437174-71437311 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 553-678
Cow position: chr2:79759-79889 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 87

Conread position: 553-680
Cow position: chr2:18615065-18615198 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 94

Conread position: 553-680
Cow position: chr2:39068481-39068352 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 77

Conread position: 553-680
Cow position: chr2:42608267-42608133 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 553-680
Cow position: chr2:71621847-71621981 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 555-678
Cow position: chr2:84480300-84480432 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 555-679
Cow position: chr2:15872129-15872003 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 79

Conread position: 555-680
Cow position: chr2:11657089-11656957 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 555-680
Cow position: chr2:22371755-22371885 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 63

Conread position: 555-680
Cow position: chr2:73981829-73981699 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 91

Conread position: 556-680
Cow position: chr2:46378593-46378726 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 558-680
Cow position: chr2:45642296-45642420 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 559-680
Cow position: chr2:81294025-81293894 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 569-680
Cow position: chr2:56338850-56338964 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 78

Conread position: 510-707
Cow position: chr20:21169481-21169679 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 124

Conread position: 533-680
Cow position: chr20:18379639-18379487 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 10

Conread position: 536-692
Cow position: chr20:15548631-15548791 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 98

Conread position: 538-681
Cow position: chr20:12581697-12581846 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 106

Conread position: 540-680
Cow position: chr20:6240263-6240412 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 548-680
Cow position: chr20:23846417-23846555 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 12

Conread position: 550-680
Cow position: chr20:12420372-12420510 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 551-671
Cow position: chr20:27407649-27407775 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 551-680
Cow position: chr20:3599156-3599291 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 551-680
Cow position: chr20:14980261-14980396 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 35, 106

Conread position: 551-681
Cow position: chr20:13805562-13805429 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 81

Conread position: 552-680
Cow position: chr20:34881158-34881288 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 30

Conread position: 553-679
Cow position: chr20:7756393-7756515 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 29

Conread position: 553-680
Cow position: chr20:10209051-10208918 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 124

Conread position: 554-680
Cow position: chr20:7737991-7738122 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 76

Conread position: 555-680
Cow position: chr20:4891876-4892010 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 555-680
Cow position: chr20:15530102-15529969 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 556-680
Cow position: chr20:17515400-17515525 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 74

Conread position: 556-680
Cow position: chr20:24070043-24069915 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 100

Conread position: 487-679
Cow position: chr21:37299794-37299593 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 25

Conread position: 536-680
Cow position: chr21:7768708-7768568 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 538-679
Cow position: chr21:40059297-40059161 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 57

Conread position: 546-680
Cow position: chr21:16498788-16498646 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 546-680
Cow position: chr21:30368346-30368206 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 85

Conread position: 546-680
Cow position: chr21:40930209-40930345 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 35

Conread position: 547-680
Cow position: chr21:12339888-12339753 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 85

Conread position: 549-678
Cow position: chr21:16119892-16120029 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 549-680
Cow position: chr21:742543-742407 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 97

Conread position: 549-680
Cow position: chr21:15012700-15012569 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 74

Conread position: 551-679
Cow position: chr21:6051772-6051634 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 551-680
Cow position: chr21:28604349-28604221 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 35

Conread position: 551-680
Cow position: chr21:29011709-29011842 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 100

Conread position: 551-680
Cow position: chr21:29418840-29418698 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 551-680
Cow position: chr21:36508497-36508364 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 553-681
Cow position: chr21:13883742-13883615 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 29

Conread position: 554-704
Cow position: chr21:14324367-14324517 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 68

Conread position: 559-673
Cow position: chr21:8349581-8349465 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 73

Conread position: 559-680
Cow position: chr21:24875611-24875483 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 562-680
Cow position: chr21:11644710-11644836 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 567-680
Cow position: chr21:8351043-8351163 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 525-680
Cow position: chr22:9127623-9127471 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 531-678
Cow position: chr22:24134103-24134261 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 533-680
Cow position: chr22:12902638-12902792 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 536-680
Cow position: chr22:7518767-7518618 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 21

Conread position: 538-678
Cow position: chr22:10594822-10594673 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 22

Conread position: 538-678
Cow position: chr22:17652645-17652500 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 8

Conread position: 538-680
Cow position: chr22:30684937-30684791 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 545-680
Cow position: chr22:42618201-42618063 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 104

Conread position: 546-678
Cow position: chr22:1304350-1304488 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 124

Conread position: 546-679
Cow position: chr22:24903796-24903656 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr22:12157644-12157781 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 91

Conread position: 546-680
Cow position: chr22:26233838-26233695 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 547-683
Cow position: chr22:4373237-4373102 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 13

Conread position: 548-680
Cow position: chr22:9735470-9735332 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 12

Conread position: 548-680
Cow position: chr22:13891778-13891638 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 548-680
Cow position: chr22:16813998-16813859 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 548-680
Cow position: chr22:29546840-29546702 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 104

Conread position: 548-680
Cow position: chr22:36432770-36432908 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 21

Conread position: 548-681
Cow position: chr22:1501085-1500956 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 36

Conread position: 549-663
Cow position: chr22:16094704-16094826 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 549-678
Cow position: chr22:4750936-4751075 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 549-680
Cow position: chr22:10416428-10416295 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 42

Conread position: 549-680
Cow position: chr22:31599634-31599494 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 549-680
Cow position: chr22:44717922-44717784 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 550-678
Cow position: chr22:13957444-13957579 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 551-664
Cow position: chr22:5677257-5677370 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 35

Conread position: 551-674
Cow position: chr22:12981525-12981656 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr22:11613626-11613487 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 551-680
Cow position: chr22:12316007-12315873 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 67

Conread position: 551-680
Cow position: chr22:12573405-12573267 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 552-679
Cow position: chr22:1384272-1384146 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 34

Conread position: 552-680
Cow position: chr22:21890167-21890297 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 46

Conread position: 552-680
Cow position: chr22:38438959-38439094 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 552-680
Cow position: chr22:44741269-44741139 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 56

Conread position: 552-681
Cow position: chr22:2876599-2876736 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 553-679
Cow position: chr22:40349539-40349407 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 100

Conread position: 553-680
Cow position: chr22:10567521-10567651 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 79

Conread position: 553-680
Cow position: chr22:17852440-17852573 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 107

Conread position: 553-680
Cow position: chr22:24890418-24890284 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 554-680
Cow position: chr22:15950193-15950323 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 555-680
Cow position: chr22:8357774-8357649 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 74

Conread position: 555-680
Cow position: chr22:33485429-33485556 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 76

Conread position: 559-679
Cow position: chr22:24047428-24047547 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 27

Conread position: 519-678
Cow position: chr23:1510692-1510856 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 15

Conread position: 530-671
Cow position: chr23:7155473-7155622 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 100

Conread position: 535-679
Cow position: chr23:2281966-2282112 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 118

Conread position: 535-680
Cow position: chr23:4505036-4504880 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 83

Conread position: 538-680
Cow position: chr23:12363400-12363549 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 538-680
Cow position: chr23:25968636-25968489 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 103

Conread position: 546-680
Cow position: chr23:16564274-16564137 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 96

Conread position: 546-681
Cow position: chr23:2801220-2801362 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 547-678
Cow position: chr23:24718593-24718731 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 548-680
Cow position: chr23:19565655-19565518 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 549-680
Cow position: chr23:27849202-27849065 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 549-699
Cow position: chr23:2016860-2017019 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 111

Conread position: 550-680
Cow position: chr23:18417283-18417161 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 551-678
Cow position: chr23:4979077-4979212 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 101

Conread position: 551-678
Cow position: chr23:20725485-20725617 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 95

Conread position: 551-680
Cow position: chr23:534432-534296 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr23:1981467-1981593 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 79

Conread position: 551-680
Cow position: chr23:2511351-2511214 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr23:17597628-17597495 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 82

Conread position: 552-673
Cow position: chr23:308413-308539 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 58

Conread position: 552-680
Cow position: chr23:15056371-15056503 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 88

Conread position: 554-680
Cow position: chr23:40275354-40275479 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 555-678
Cow position: chr23:22238617-22238751 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 555-680
Cow position: chr23:26986070-26986203 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 31

Conread position: 555-680
Cow position: chr23:40995365-40995239 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 68

Conread position: 558-678
Cow position: chr23:7845487-7845364 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 79

Conread position: 559-680
Cow position: chr23:10497894-10497766 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 72

Conread position: 528-680
Cow position: chr24:2402176-2402326 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 14

Conread position: 529-688
Cow position: chr24:30325581-30325747 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 536-680
Cow position: chr24:17104376-17104528 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 546-678
Cow position: chr24:37974799-37974937 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 89

Conread position: 546-680
Cow position: chr24:18302899-18302755 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr24:22129460-22129596 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 546-680
Cow position: chr24:33372729-33372594 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 14

Conread position: 547-680
Cow position: chr24:41925998-41925864 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 13

Conread position: 549-680
Cow position: chr24:5142119-5141984 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 86

Conread position: 549-680
Cow position: chr24:6488385-6488250 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 70

Conread position: 551-680
Cow position: chr24:29539749-29539888 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 552-680
Cow position: chr24:34742927-34742795 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 48

Conread position: 552-681
Cow position: chr24:17311051-17311181 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 34

Conread position: 552-692
Cow position: chr24:18811453-18811592 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 19

Conread position: 553-680
Cow position: chr24:26848564-26848691 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 33

Conread position: 554-680
Cow position: chr24:13948298-13948162 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 102

Conread position: 555-680
Cow position: chr24:30236047-30235912 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 94

Conread position: 555-680
Cow position: chr24:39523275-39523407 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 563-680
Cow position: chr24:25122504-25122383 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 87

Conread position: 530-680
Cow position: chr25:7864551-7864397 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 16

Conread position: 531-680
Cow position: chr25:2415014-2414861 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 12

Conread position: 536-678
Cow position: chr25:7750661-7750518 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 9

Conread position: 536-681
Cow position: chr25:7551152-7551304 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 102

Conread position: 538-680
Cow position: chr25:26679441-26679290 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 539-676
Cow position: chr25:14791966-14791822 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 19

Conread position: 539-678
Cow position: chr25:24115100-24115250 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 539-680
Cow position: chr25:7684686-7684836 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 544-680
Cow position: chr25:18288560-18288705 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 546-678
Cow position: chr25:35762795-35762653 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 106

Conread position: 546-680
Cow position: chr25:17141310-17141166 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 547-680
Cow position: chr25:28667845-28667982 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 548-680
Cow position: chr25:15999347-15999488 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 12

Conread position: 549-680
Cow position: chr25:9025326-9025186 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 117

Conread position: 549-680
Cow position: chr25:13470509-13470650 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 11

Conread position: 550-676
Cow position: chr25:15573580-15573456 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 45

Conread position: 550-679
Cow position: chr25:41150762-41150901 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 550-680
Cow position: chr25:13272771-13272633 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 551-673
Cow position: chr25:37022291-37022417 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 551-678
Cow position: chr25:33557467-33557332 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr25:23769696-23769823 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr25:33550712-33550575 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 552-675
Cow position: chr25:15349709-15349839 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 552-677
Cow position: chr25:24669252-24669382 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 82

Conread position: 553-680
Cow position: chr25:9573936-9574070 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 554-680
Cow position: chr25:4157049-4157182 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 555-680
Cow position: chr25:4521644-4521777 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 556-678
Cow position: chr25:31657084-31657211 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 76

Conread position: 558-680
Cow position: chr25:26072369-26072497 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 90

Conread position: 507-678
Cow position: chr26:9535776-9535601 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 52

Conread position: 507-680
Cow position: chr26:13022724-13022545 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 7

Conread position: 526-680
Cow position: chr26:18825041-18825200 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 32

Conread position: 531-680
Cow position: chr26:16795972-16796127 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 104

Conread position: 533-680
Cow position: chr26:21320183-21320029 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 536-680
Cow position: chr26:33114706-33114855 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 128

Conread position: 546-680
Cow position: chr26:19636514-19636377 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 547-680
Cow position: chr26:10502949-10502812 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 547-680
Cow position: chr26:20291469-20291609 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 548-680
Cow position: chr26:13862816-13862954 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 118

Conread position: 549-680
Cow position: chr26:7524998-7525123 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 47, 17

Conread position: 549-680
Cow position: chr26:33201849-33201987 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 551-677
Cow position: chr26:34559952-34560085 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 551-680
Cow position: chr26:28251373-28251239 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 95

Conread position: 552-681
Cow position: chr26:4584993-4585131 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 0

Conread position: 556-680
Cow position: chr26:11875010-11875138 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 558-680
Cow position: chr26:8187086-8186961 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 25, 41

Conread position: 477-680
Cow position: chr27:26643380-26643580 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 132

Conread position: 485-680
Cow position: chr27:16103501-16103701 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 51

Conread position: 521-680
Cow position: chr27:23484943-23485102 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 6

Conread position: 534-678
Cow position: chr27:18491303-18491444 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 535-680
Cow position: chr27:28476370-28476223 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 25

Conread position: 538-680
Cow position: chr27:11133829-11133977 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 22

Conread position: 538-680
Cow position: chr27:27606555-27606406 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 545-680
Cow position: chr27:22220297-22220444 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 546-663
Cow position: chr27:1059068-1058951 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 40

Conread position: 547-680
Cow position: chr27:15434082-15434215 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 52

Conread position: 548-680
Cow position: chr27:17397701-17397564 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 86

Conread position: 549-678
Cow position: chr27:1184422-1184289 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 97

Conread position: 549-678
Cow position: chr27:20828953-20828822 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 94

Conread position: 549-679
Cow position: chr27:24223707-24223841 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 11

Conread position: 550-674
Cow position: chr27:24952200-24952070 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 550-680
Cow position: chr27:15669022-15668881 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 550-680
Cow position: chr27:19576571-19576433 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 551-674
Cow position: chr27:10867905-10867780 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 92

Conread position: 551-678
Cow position: chr27:3498309-3498439 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 36, 74

Conread position: 551-679
Cow position: chr27:11528682-11528820 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr27:426723-426860 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr27:27529061-27528930 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 91

Conread position: 551-681
Cow position: chr27:31153801-31153668 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 14

Conread position: 552-678
Cow position: chr27:22171056-22171188 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 68

Conread position: 552-680
Cow position: chr27:6106461-6106594 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 552-680
Cow position: chr27:7412148-7412283 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 554-681
Cow position: chr27:6319679-6319810 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 70

Conread position: 555-680
Cow position: chr27:23527742-23527611 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 90

Conread position: 557-678
Cow position: chr27:12284764-12284885 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 512-678
Cow position: chr28:7618913-7619077 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 91

Conread position: 515-678
Cow position: chr28:26960667-26960836 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 23

Conread position: 524-680
Cow position: chr28:30902358-30902197 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 112

Conread position: 525-678
Cow position: chr28:133845-134013 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 37

Conread position: 536-680
Cow position: chr28:3257212-3257059 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 7

Conread position: 536-680
Cow position: chr28:17948892-17949042 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 91

Conread position: 539-680
Cow position: chr28:21868677-21868528 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 546-679
Cow position: chr28:29416512-29416645 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 91

Conread position: 546-680
Cow position: chr28:4016736-4016602 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 86

Conread position: 546-680
Cow position: chr28:8936362-8936221 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 112

Conread position: 547-678
Cow position: chr28:5255083-5254947 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 39, 99

Conread position: 547-680
Cow position: chr28:7350862-7350725 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 547-680
Cow position: chr28:9705869-9705721 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 547-680
Cow position: chr28:11305424-11305562 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 15

Conread position: 548-680
Cow position: chr28:7131880-7132017 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 35, 88

Conread position: 548-680
Cow position: chr28:22500294-22500429 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 90

Conread position: 549-679
Cow position: chr28:17740035-17739894 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 550-680
Cow position: chr28:2151231-2151369 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 550-680
Cow position: chr28:3492578-3492713 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 96

Conread position: 550-680
Cow position: chr28:5204394-5204266 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 36

Conread position: 550-680
Cow position: chr28:11987372-11987242 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 68

Conread position: 550-680
Cow position: chr28:12055610-12055480 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 68

Conread position: 551-675
Cow position: chr28:4071166-4071042 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 81

Conread position: 551-680
Cow position: chr28:3678567-3678433 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 84

Conread position: 551-680
Cow position: chr28:4013291-4013155 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr28:8787747-8787610 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr28:10533119-10533250 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 15

Conread position: 551-680
Cow position: chr28:17943932-17943801 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 80

Conread position: 551-680
Cow position: chr28:24082478-24082341 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 551-715
Cow position: chr28:4101720-4101559 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 57

Conread position: 552-679
Cow position: chr28:11422612-11422744 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 34

Conread position: 552-680
Cow position: chr28:16369882-16370012 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 50

Conread position: 553-680
Cow position: chr28:777882-777746 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 554-679
Cow position: chr28:21845156-21845029 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 80

Conread position: 555-679
Cow position: chr28:5805866-5805739 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 54

Conread position: 538-680
Cow position: chr29:31929200-31929051 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 20

Conread position: 539-680
Cow position: chr29:17110166-17110021 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 21

Conread position: 546-678
Cow position: chr29:19949512-19949373 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr29:9378842-9378701 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 546-680
Cow position: chr29:22028753-22028891 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 87

Conread position: 547-668
Cow position: chr29:34919256-34919383 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 547-679
Cow position: chr29:9709899-9709760 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 76

Conread position: 547-680
Cow position: chr29:10839145-10839005 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 550-680
Cow position: chr29:36781107-36781240 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 84

Conread position: 550-695
Cow position: chr29:7443864-7444012 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 104

Conread position: 551-678
Cow position: chr29:19762465-19762334 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chr29:7414696-7414566 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chr29:25737218-25737350 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 15

Conread position: 552-680
Cow position: chr29:4070821-4070688 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 74

Conread position: 552-680
Cow position: chr29:19363909-19363774 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 552-680
Cow position: chr29:24624442-24624312 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 553-672
Cow position: chr29:659481-659354 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 555-679
Cow position: chr29:36697955-36697822 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 555-680
Cow position: chr29:12890874-12890746 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 92

Conread position: 555-680
Cow position: chr29:36357326-36357190 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 556-680
Cow position: chr29:28066677-28066551 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 56

Conread position: 558-675
Cow position: chr29:29645129-29645246 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 37

Conread position: 508-680
Cow position: chr3:19788620-19788788 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 14

Conread position: 519-678
Cow position: chr3:18687111-18686950 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 14

Conread position: 520-680
Cow position: chr3:70761912-70762081 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 525-680
Cow position: chr3:15159232-15159073 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 5

Conread position: 535-679
Cow position: chr3:74234376-74234229 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 44

Conread position: 536-680
Cow position: chr3:75966588-75966742 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 7

Conread position: 537-680
Cow position: chr3:49344885-49344735 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 538-680
Cow position: chr3:49363297-49363151 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 21

Conread position: 544-699
Cow position: chr3:36418301-36418461 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 102

Conread position: 545-678
Cow position: chr3:23131986-23132125 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 12

Conread position: 545-680
Cow position: chr3:43895879-43896018 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 546-677
Cow position: chr3:68565995-68565865 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 14

Conread position: 546-680
Cow position: chr3:2637129-2636991 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 99

Conread position: 546-680
Cow position: chr3:8522970-8523112 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 126

Conread position: 546-680
Cow position: chr3:24370574-24370443 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 14

Conread position: 546-680
Cow position: chr3:54506891-54506749 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 546-680
Cow position: chr3:74050522-74050660 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 77

Conread position: 546-681
Cow position: chr3:24774826-24774694 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 93

Conread position: 547-679
Cow position: chr3:57704515-57704376 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 547-680
Cow position: chr3:4549200-4549069 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 547-680
Cow position: chr3:39967313-39967447 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 90

Conread position: 547-680
Cow position: chr3:64197011-64196868 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 547-680
Cow position: chr3:67407184-67407324 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 547-680
Cow position: chr3:80565134-80565008 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 19

Conread position: 549-679
Cow position: chr3:26977718-26977582 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 549-680
Cow position: chr3:55177570-55177704 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 83

Conread position: 549-680
Cow position: chr3:76156167-76156029 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 549-681
Cow position: chr3:27274708-27274569 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 550-680
Cow position: chr3:23168887-23169024 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 550-680
Cow position: chr3:59605022-59604885 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 98

Conread position: 550-680
Cow position: chr3:68156907-68156765 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 550-680
Cow position: chr3:75908091-75907954 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 80

Conread position: 551-675
Cow position: chr3:76270067-76269938 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 83

Conread position: 551-678
Cow position: chr3:11229192-11229321 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 92

Conread position: 551-680
Cow position: chr3:8349392-8349521 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 72

Conread position: 551-680
Cow position: chr3:8526200-8526323 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 551-680
Cow position: chr3:31361602-31361467 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 71

Conread position: 551-680
Cow position: chr3:48072707-48072840 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chr3:53249664-53249530 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 95

Conread position: 551-680
Cow position: chr3:56943751-56943884 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 82

Conread position: 551-680
Cow position: chr3:73701677-73701549 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 20

Conread position: 551-681
Cow position: chr3:45882078-45881939 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 552-680
Cow position: chr3:23804680-23804547 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 552-680
Cow position: chr3:69650720-69650847 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 34

Conread position: 553-680
Cow position: chr3:52845732-52845598 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 554-680
Cow position: chr3:39969687-39969820 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 555-679
Cow position: chr3:8540676-8540550 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 74

Conread position: 555-680
Cow position: chr3:22165239-22165374 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 559-680
Cow position: chr3:10958073-10958198 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 561-680
Cow position: chr3:20021437-20021311 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 494-680
Cow position: chr4:66412436-66412245 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 22

Conread position: 514-677
Cow position: chr4:68358554-68358392 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 17

Conread position: 524-679
Cow position: chr4:22071450-22071612 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 36

Conread position: 533-680
Cow position: chr4:37915126-37915277 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 27

Conread position: 536-680
Cow position: chr4:19504131-19503987 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 7

Conread position: 537-680
Cow position: chr4:42608948-42608797 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 538-680
Cow position: chr4:8871615-8871473 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 97, 62

Conread position: 539-680
Cow position: chr4:19333592-19333445 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 539-711
Cow position: chr4:52748255-52748429 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 102

Conread position: 540-680
Cow position: chr4:34510035-34509899 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 79

Conread position: 546-662
Cow position: chr4:25769242-25769361 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 14

Conread position: 546-680
Cow position: chr4:19578582-19578446 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 14

Conread position: 546-680
Cow position: chr4:38944057-38944199 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 546-680
Cow position: chr4:59001938-59002081 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 548-678
Cow position: chr4:34919077-34919213 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 12

Conread position: 548-680
Cow position: chr4:46404713-46404849 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 549-678
Cow position: chr4:14504851-14504978 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 58

Conread position: 549-678
Cow position: chr4:27291810-27291939 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 46

Conread position: 549-679
Cow position: chr4:30944151-30944014 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 549-680
Cow position: chr4:35982195-35982058 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 124

Conread position: 549-680
Cow position: chr4:65173298-65173161 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 11

Conread position: 549-681
Cow position: chr4:19328779-19328642 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 87

Conread position: 550-680
Cow position: chr4:13508043-13508180 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 550-680
Cow position: chr4:60527377-60527239 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 551-669
Cow position: chr4:6202209-6202334 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-679
Cow position: chr4:12666226-12666090 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 551-679
Cow position: chr4:28854081-28854215 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 552-678
Cow position: chr4:479608-479731 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 553-680
Cow position: chr4:26659493-26659359 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 553-680
Cow position: chr4:47048307-47048176 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 553-681
Cow position: chr4:5276265-5276400 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 553-684
Cow position: chr4:3688122-3687983 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 554-678
Cow position: chr4:4084916-4085050 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 554-683
Cow position: chr4:51851404-51851268 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 554-697
Cow position: chr4:34544497-34544346 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 60

Conread position: 555-680
Cow position: chr4:17851070-17851194 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 11

Conread position: 555-680
Cow position: chr4:62472266-62472138 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 10

Conread position: 555-680
Cow position: chr4:68590960-68590830 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 559-680
Cow position: chr4:17186161-17186292 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 559-680
Cow position: chr4:27657159-27657035 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 75

Conread position: 559-680
Cow position: chr4:41907395-41907523 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 559-681
Cow position: chr4:39007684-39007562 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 73

Conread position: 506-678
Cow position: chr5:64175852-64176032 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 22

Conread position: 518-680
Cow position: chr5:37842015-37842187 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 8

Conread position: 521-678
Cow position: chr5:17105100-17104944 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 25

Conread position: 524-680
Cow position: chr5:4728327-4728166 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 97

Conread position: 525-680
Cow position: chr5:57074081-57074239 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 57

Conread position: 527-680
Cow position: chr5:21721222-21721378 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 69, 35

Conread position: 530-680
Cow position: chr5:14000893-14000737 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 114

Conread position: 534-680
Cow position: chr5:34918591-34918438 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 114

Conread position: 538-680
Cow position: chr5:32976007-32975850 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 538-680
Cow position: chr5:34288011-34288161 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 538-681
Cow position: chr5:60207946-60207799 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 13

Conread position: 538-704
Cow position: chr5:41628434-41628602 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 139, 57

Conread position: 539-678
Cow position: chr5:22242532-22242671 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 84

Conread position: 545-680
Cow position: chr5:46479009-46479150 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 546-662
Cow position: chr5:63940220-63940338 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 14

Conread position: 546-680
Cow position: chr5:2240754-2240899 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr5:17537444-17537581 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 85

Conread position: 546-680
Cow position: chr5:45845455-45845599 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 118

Conread position: 546-680
Cow position: chr5:48104495-48104353 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 547-680
Cow position: chr5:3626946-3627085 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 119

Conread position: 547-680
Cow position: chr5:35190339-35190202 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 13

Conread position: 547-680
Cow position: chr5:38833348-38833213 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 65

Conread position: 548-680
Cow position: chr5:4981677-4981542 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 18

Conread position: 548-680
Cow position: chr5:26147821-26147683 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 20

Conread position: 549-680
Cow position: chr5:51298484-51298621 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 11

Conread position: 550-678
Cow position: chr5:57686517-57686643 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 551-678
Cow position: chr5:63300308-63300172 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr5:6245435-6245571 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr5:6876736-6876874 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 11

Conread position: 551-680
Cow position: chr5:9893895-9894031 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 97

Conread position: 551-680
Cow position: chr5:12557057-12557195 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 551-680
Cow position: chr5:21829094-21828959 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chr5:26548913-26549048 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 96

Conread position: 551-680
Cow position: chr5:42050774-42050644 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 80

Conread position: 551-680
Cow position: chr5:46512538-46512677 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr5:55177110-55176978 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 88

Conread position: 551-680
Cow position: chr5:69383481-69383347 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 93

Conread position: 552-678
Cow position: chr5:47602037-47601906 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 552-679
Cow position: chr5:34787801-34787667 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 552-680
Cow position: chr5:36038776-36038909 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 92

Conread position: 552-680
Cow position: chr5:49207100-49207235 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 553-680
Cow position: chr5:46540832-46540964 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 93

Conread position: 554-680
Cow position: chr5:60948359-60948224 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-680
Cow position: chr5:63627313-63627443 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 555-680
Cow position: chr5:57497200-57497332 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 560-680
Cow position: chr5:21520229-21520349 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 69

Conread position: 567-680
Cow position: chr5:45397779-45397661 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 521-680
Cow position: chr6:44636238-44636404 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 529-680
Cow position: chr6:3937054-3936888 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 536-680
Cow position: chr6:32866966-32867113 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 23

Conread position: 538-680
Cow position: chr6:34423206-34423353 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 20

Conread position: 539-680
Cow position: chr6:57545973-57546123 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 540-680
Cow position: chr6:60143945-60144092 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 545-678
Cow position: chr6:30024126-30023993 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 86

Conread position: 546-680
Cow position: chr6:120486-120351 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 96

Conread position: 546-680
Cow position: chr6:21346907-21347045 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 13

Conread position: 547-679
Cow position: chr6:23696241-23696107 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 548-671
Cow position: chr6:55646703-55646831 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 548-678
Cow position: chr6:24468153-24468288 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 86

Conread position: 548-680
Cow position: chr6:10105738-10105873 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 15

Conread position: 548-680
Cow position: chr6:48097357-48097493 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 548-680
Cow position: chr6:67451126-67451265 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 27

Conread position: 549-680
Cow position: chr6:21293253-21293391 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 550-680
Cow position: chr6:50577759-50577626 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 84

Conread position: 550-687
Cow position: chr6:8094042-8094179 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 69

Conread position: 551-669
Cow position: chr6:60674074-60673951 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 81

Conread position: 551-680
Cow position: chr6:7291554-7291421 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 89

Conread position: 551-680
Cow position: chr6:59759412-59759276 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr6:66058466-66058602 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 551-681
Cow position: chr6:1475580-1475450 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 85

Conread position: 551-681
Cow position: chr6:53024568-53024699 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 81

Conread position: 552-680
Cow position: chr6:15243081-15242942 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 552-680
Cow position: chr6:25614848-25614985 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 552-680
Cow position: chr6:47520296-47520159 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 552-680
Cow position: chr6:48278653-48278783 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 68

Conread position: 555-680
Cow position: chr6:50504695-50504562 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 559-687
Cow position: chr6:67069580-67069711 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 127

Conread position: 560-679
Cow position: chr6:32006222-32006348 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 595-711
Cow position: chr6:15233179-15233066 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 516-680
Cow position: chr7:63707036-63707209 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 523-678
Cow position: chr7:23672025-23671862 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 37

Conread position: 524-680
Cow position: chr7:2738954-2739123 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 19

Conread position: 527-676
Cow position: chr7:17750574-17750730 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 16

Conread position: 535-680
Cow position: chr7:51910369-51910229 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 21

Conread position: 536-678
Cow position: chr7:12494860-12495010 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 538-680
Cow position: chr7:36996616-36996470 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 125

Conread position: 546-678
Cow position: chr7:11958193-11958329 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 546-679
Cow position: chr7:6043887-6044027 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 546-680
Cow position: chr7:26263405-26263543 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 14

Conread position: 546-680
Cow position: chr7:31497946-31497818 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 20

Conread position: 546-680
Cow position: chr7:46818250-46818386 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 98

Conread position: 546-680
Cow position: chr7:48721655-48721797 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 114

Conread position: 547-680
Cow position: chr7:20180951-20181090 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 100

Conread position: 548-680
Cow position: chr7:8089410-8089273 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 86

Conread position: 549-675
Cow position: chr7:50860243-50860120 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 41

Conread position: 550-680
Cow position: chr7:53211456-53211326 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 36

Conread position: 551-680
Cow position: chr7:4765084-4764953 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 83

Conread position: 551-680
Cow position: chr7:11960636-11960504 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 99

Conread position: 551-680
Cow position: chr7:23205383-23205519 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 110

Conread position: 551-680
Cow position: chr7:30931738-30931869 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 83

Conread position: 551-680
Cow position: chr7:32259952-32260087 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 84

Conread position: 553-662
Cow position: chr7:34098844-34098727 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 553-680
Cow position: chr7:23819135-23819003 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 553-680
Cow position: chr7:37394543-37394406 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 553-680
Cow position: chr7:59688779-59688646 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 555-680
Cow position: chr7:15570278-15570146 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 555-680
Cow position: chr7:31170718-31170847 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 85

Conread position: 555-680
Cow position: chr7:47513445-47513577 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 556-679
Cow position: chr7:10414900-10415025 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 75

Conread position: 559-680
Cow position: chr7:25087479-25087355 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 76

Conread position: 479-684
Cow position: chr8:31297555-31297345 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 17

Conread position: 483-680
Cow position: chr8:55089571-55089772 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 82

Conread position: 524-673
Cow position: chr8:3686103-3686257 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 524-680
Cow position: chr8:43439847-43439688 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 525-678
Cow position: chr8:44449365-44449525 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 115

Conread position: 527-680
Cow position: chr8:32968301-32968152 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 55, 29

Conread position: 533-680
Cow position: chr8:46082396-46082245 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 107

Conread position: 534-680
Cow position: chr8:53230243-53230099 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 8

Conread position: 535-680
Cow position: chr8:47679735-47679585 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 51, 111

Conread position: 539-678
Cow position: chr8:8189832-8189980 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 542-675
Cow position: chr8:47707296-47707432 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 103

Conread position: 546-663
Cow position: chr8:57041413-57041537 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 546-680
Cow position: chr8:49305530-49305673 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 14

Conread position: 547-678
Cow position: chr8:35452791-35452651 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 547-680
Cow position: chr8:20850141-20850279 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 547-680
Cow position: chr8:38572052-38572192 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 547-715
Cow position: chr8:27914471-27914638 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 78

Conread position: 548-680
Cow position: chr8:5730247-5730109 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 88

Conread position: 548-680
Cow position: chr8:42762219-42762354 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 12

Conread position: 548-680
Cow position: chr8:55070930-55070794 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 550-680
Cow position: chr8:6224227-6224360 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 111

Conread position: 551-678
Cow position: chr8:29173421-29173288 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chr8:27954938-27955074 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 114

Conread position: 551-680
Cow position: chr8:32133478-32133346 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 84

Conread position: 551-680
Cow position: chr8:55716966-55716829 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 551-680
Cow position: chr8:55885186-55885050 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 554-680
Cow position: chr8:19785069-19784935 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 555-680
Cow position: chr8:39898896-39898774 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 80

Conread position: 555-680
Cow position: chr8:51501077-51501209 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 555-681
Cow position: chr8:48527754-48527885 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 89

Conread position: 556-679
Cow position: chr8:58393767-58393640 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 481-691
Cow position: chr9:28726975-28726758 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 199

Conread position: 522-680
Cow position: chr9:33584888-33584722 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 533-678
Cow position: chr9:7543451-7543302 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 111

Conread position: 535-680
Cow position: chr9:45141786-45141637 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 91

Conread position: 536-680
Cow position: chr9:6192647-6192497 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 112

Conread position: 536-680
Cow position: chr9:41728072-41728223 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 7

Conread position: 545-680
Cow position: chr9:40984324-40984468 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 546-663
Cow position: chr9:61637256-61637373 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 86

Conread position: 546-672
Cow position: chr9:4241228-4241359 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 86

Conread position: 546-680
Cow position: chr9:11098630-11098489 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 99

Conread position: 546-680
Cow position: chr9:12773516-12773653 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 14

Conread position: 547-680
Cow position: chr9:23956155-23956017 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 100

Conread position: 548-680
Cow position: chr9:39011643-39011506 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 12

Conread position: 548-684
Cow position: chr9:34399493-34399638 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 549-678
Cow position: chr9:34286622-34286760 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 549-680
Cow position: chr9:28747694-28747557 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 97

Conread position: 550-680
Cow position: chr9:11380820-11380683 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 551-678
Cow position: chr9:22447468-22447333 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 551-679
Cow position: chr9:9596124-9595990 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 96

Conread position: 551-680
Cow position: chr9:12268861-12268993 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 92

Conread position: 551-680
Cow position: chr9:24887031-24887169 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr9:34024525-34024662 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 551-682
Cow position: chr9:55577537-55577673 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 85

Conread position: 552-680
Cow position: chr9:6237663-6237530 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 86

Conread position: 552-680
Cow position: chr9:53323960-53323821 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 552-681
Cow position: chr9:5263331-5263464 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 91

Conread position: 553-680
Cow position: chr9:20579760-20579631 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 81

Conread position: 554-680
Cow position: chr9:28772970-28773102 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 554-680
Cow position: chr9:57131327-57131458 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 556-680
Cow position: chr9:34707479-34707348 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 558-679
Cow position: chr9:43159588-43159714 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 559-680
Cow position: chr9:11873461-11873341 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 76

Conread position: 561-680
Cow position: chr9:26394512-26394386 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 567-680
Cow position: chr9:52998536-52998416 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 480-680
Cow position: chrX:31279625-31279831 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 19

Conread position: 520-680
Cow position: chrX:42087089-42086920 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 525-680
Cow position: chrX:27145857-27145697 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 121

Conread position: 534-680
Cow position: chrX:23136980-23136833 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 103

Conread position: 536-680
Cow position: chrX:4399360-4399212 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 9

Conread position: 539-680
Cow position: chrX:20957481-20957331 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 27

Conread position: 540-680
Cow position: chrX:8869161-8869309 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 540-681
Cow position: chrX:27170978-27170833 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 30

Conread position: 543-680
Cow position: chrX:17525632-17525774 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 93

Conread position: 543-680
Cow position: chrX:38094286-38094427 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 99

Conread position: 544-680
Cow position: chrX:6480356-6480503 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 546-680
Cow position: chrX:24633923-24633788 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 80, 50

Conread position: 546-680
Cow position: chrX:37177104-37176967 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 547-676
Cow position: chrX:5919723-5919593 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 35

Conread position: 547-680
Cow position: chrX:23358881-23359021 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 547-680
Cow position: chrX:35986051-35985911 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 35

Conread position: 548-680
Cow position: chrX:27668728-27668865 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 12

Conread position: 549-678
Cow position: chrX:27270602-27270471 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 11

Conread position: 550-680
Cow position: chrX:37072619-37072482 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 550-680
Cow position: chrX:42927597-42927731 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 65

Conread position: 550-704
Cow position: chrX:38726911-38727069 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 61

Conread position: 551-678
Cow position: chrX:23497465-23497596 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 82

Conread position: 551-678
Cow position: chrX:34792091-34792217 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 71

Conread position: 551-679
Cow position: chrX:28940476-28940339 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chrX:231794-231925 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 31

Conread position: 551-680
Cow position: chrX:6414264-6414134 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 551-680
Cow position: chrX:22075027-22074893 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 551-680
Cow position: chrX:42875441-42875305 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chrX:43028461-43028325 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 551-681
Cow position: chrX:33854994-33855128 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 551-713
Cow position: chrX:40685097-40685267 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 35, 154

Conread position: 552-680
Cow position: chrX:11656309-11656174 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 552-680
Cow position: chrX:38218944-38218807 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 553-680
Cow position: chrX:3494820-3494954 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 553-680
Cow position: chrX:12979605-12979741 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 553-680
Cow position: chrX:14135905-14135771 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 553-680
Cow position: chrX:20583890-20583759 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 553-680
Cow position: chrX:27431694-27431825 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 553-680
Cow position: chrX:35659024-35658889 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 553-680
Cow position: chrX:41215553-41215415 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 554-680
Cow position: chrX:13177255-13177383 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 89

Conread position: 555-680
Cow position: chrX:42380884-42381019 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 558-680
Cow position: chrX:38642467-38642342 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 58

Conread position: 559-681
Cow position: chrX:41526310-41526437 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0