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Cow genome map

           
Conread name:
           
Ss1.1-rret22_k12.5
        

               
Conread position:
               
95-476
               

               
Cow position:
               
chr1:67651105-67651502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
114-470
               

               
Cow position:
               
chr1:100803141-100802783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
98, 196
               

               
Conread position:
               
117-476
               

               
Cow position:
               
chr1:82385869-82386237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
120-486
               

               
Cow position:
               
chr1:37259157-37259525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
127-457
               

               
Cow position:
               
chr1:2064287-2064622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
128-469
               

               
Cow position:
               
chr1:49046931-49047269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
129-406
               

               
Cow position:
               
chr1:52251863-52252139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
129-468
               

               
Cow position:
               
chr1:15995014-15994680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
133-477
               

               
Cow position:
               
chr1:73620879-73620523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
133-477
               

               
Cow position:
               
chr1:83480718-83481069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
134-476
               

               
Cow position:
               
chr1:83055444-83055105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
84, 175
               

               
Conread position:
               
134-478
               

               
Cow position:
               
chr1:13306413-13306749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
151, 120
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr1:73656534-73656177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr1:32700581-32700924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr1:37286582-37286224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
135-489
               

               
Cow position:
               
chr1:69775417-69775786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
137-450
               

               
Cow position:
               
chr1:50276222-50276542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
147-444
               

               
Cow position:
               
chr1:73073869-73074166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
147-473
               

               
Cow position:
               
chr1:68261010-68261349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr1:30559540-30559889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 196
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr1:49597172-49597520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
148-458
               

               
Cow position:
               
chr1:63108501-63108180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
148-460
               

               
Cow position:
               
chr1:87032972-87033283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
148-470
               

               
Cow position:
               
chr1:54480780-54480443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
64, 324
               

               
Conread position:
               
148-471
               

               
Cow position:
               
chr1:15901658-15901982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
148-473
               

               
Cow position:
               
chr1:15933020-15933353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr1:4038314-4038644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr1:58874047-58873707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
148-491
               

               
Cow position:
               
chr1:37653271-37652926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
149-402
               

               
Cow position:
               
chr1:48454204-48454456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr1:56071989-56072309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr1:72288195-72287855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
60, 206
               

               
Conread position:
               
150-495
               

               
Cow position:
               
chr1:37102712-37102355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
151-477
               

               
Cow position:
               
chr1:33768347-33768026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
154-471
               

               
Cow position:
               
chr1:56158847-56158538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
154-477
               

               
Cow position:
               
chr1:9148326-9147996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
154-479
               

               
Cow position:
               
chr1:26770602-26770263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 193
               

               
Conread position:
               
165-391
               

               
Cow position:
               
chr1:36861903-36862129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
165-477
               

               
Cow position:
               
chr1:26135711-26136014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
165-479
               

               
Cow position:
               
chr1:90682800-90683118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
166-477
               

               
Cow position:
               
chr1:51422117-51421802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
167-435
               

               
Cow position:
               
chr1:3408785-3408509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
177-469
               

               
Cow position:
               
chr1:35560158-35559861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
35, 267
               

               
Conread position:
               
182-479
               

               
Cow position:
               
chr1:5614069-5613784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
182-483
               

               
Cow position:
               
chr1:47578812-47578492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 222
               

               
Conread position:
               
183-470
               

               
Cow position:
               
chr1:8156570-8156287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
284-476
               

               
Cow position:
               
chr1:25078130-25078318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
287-477
               

               
Cow position:
               
chr1:29442044-29442229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
288-454
               

               
Cow position:
               
chr1:79882393-79882228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
288-470
               

               
Cow position:
               
chr1:28656136-28656321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
288-477
               

               
Cow position:
               
chr1:95364073-95363883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
288-484
               

               
Cow position:
               
chr1:82951358-82951159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
291-488
               

               
Cow position:
               
chr1:64148846-64148650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
292-469
               

               
Cow position:
               
chr1:74012807-74012981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
294-450
               

               
Cow position:
               
chr1:82112253-82112407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr1:7946072-7946233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
324-477
               

               
Cow position:
               
chr1:80389947-80389796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
326-479
               

               
Cow position:
               
chr1:97016729-97016578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 39
               

               
Conread position:
               
328-477
               

               
Cow position:
               
chr1:60074724-60074578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
117-469
               

               
Cow position:
               
chr10:3945583-3945224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
125-478
               

               
Cow position:
               
chr10:13241089-13240736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
126-472
               

               
Cow position:
               
chr10:17411875-17412240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 213
               

               
Conread position:
               
135-460
               

               
Cow position:
               
chr10:20922062-20922396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 183
               

               
Conread position:
               
135-470
               

               
Cow position:
               
chr10:62857806-62858152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr10:43790123-43789774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr10:18084985-18085332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 6
               

               
Conread position:
               
136-452
               

               
Cow position:
               
chr10:500649-500335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
136-478
               

               
Cow position:
               
chr10:62865648-62865318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
137-471
               

               
Cow position:
               
chr10:43697404-43697070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
139-475
               

               
Cow position:
               
chr10:1611211-1610885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
139-479
               

               
Cow position:
               
chr10:41069712-41069372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr10:6906289-6906639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 303
               

               
Conread position:
               
148-453
               

               
Cow position:
               
chr10:28999081-28998781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr10:13416710-13416382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
119, 193
               

               
Conread position:
               
148-461
               

               
Cow position:
               
chr10:45988563-45988877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr10:40877523-40877178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 185
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr10:45352154-45351815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 203
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr10:50579686-50580016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr10:53471202-53471521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
148-478
               

               
Cow position:
               
chr10:33812493-33812164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr10:316275-316605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
149-460
               

               
Cow position:
               
chr10:59534372-59534061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr10:51774822-51774505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
151-480
               

               
Cow position:
               
chr10:39147346-39147666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
154-418
               

               
Cow position:
               
chr10:5827595-5827870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
165-479
               

               
Cow position:
               
chr10:69262607-69262932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
170-477
               

               
Cow position:
               
chr10:9559824-9559506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
175-419
               

               
Cow position:
               
chr10:11349075-11348825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
177-498
               

               
Cow position:
               
chr10:52612717-52612380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
178-476
               

               
Cow position:
               
chr10:12519628-12519926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
178-477
               

               
Cow position:
               
chr10:65095488-65095175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
182-479
               

               
Cow position:
               
chr10:33863585-33863259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 300
               

               
Conread position:
               
183-464
               

               
Cow position:
               
chr10:37380072-37379781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 198
               

               
Conread position:
               
288-475
               

               
Cow position:
               
chr10:8679834-8680027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
290-454
               

               
Cow position:
               
chr10:48846353-48846193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
290-471
               

               
Cow position:
               
chr10:47790497-47790318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
290-472
               

               
Cow position:
               
chr10:1942660-1942480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr10:21385240-21385053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
290-478
               

               
Cow position:
               
chr10:63249511-63249696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr10:11083646-11083833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
311-474
               

               
Cow position:
               
chr10:49197698-49197534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr11:20836847-20836582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
56-412
               

               
Cow position:
               
chr11:75576598-75576233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
101-476
               

               
Cow position:
               
chr11:16743297-16742900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
116-460
               

               
Cow position:
               
chr11:56268835-56268496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
120-473
               

               
Cow position:
               
chr11:48683028-48682682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
121-456
               

               
Cow position:
               
chr11:26081212-26081560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
121-476
               

               
Cow position:
               
chr11:20036266-20035902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
125-458
               

               
Cow position:
               
chr11:35651046-35651388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
125-477
               

               
Cow position:
               
chr11:39175989-39175633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 136
               

               
Conread position:
               
128-479
               

               
Cow position:
               
chr11:28221103-28220736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
129-487
               

               
Cow position:
               
chr11:65117213-65117580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
82, 188
               

               
Conread position:
               
133-479
               

               
Cow position:
               
chr11:61055388-61055738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr11:65704134-65703906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
150, 30
               

               
Conread position:
               
135-460
               

               
Cow position:
               
chr11:76958785-76959097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
137-475
               

               
Cow position:
               
chr11:41280408-41280058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
137-477
               

               
Cow position:
               
chr11:55933421-55933783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
140-477
               

               
Cow position:
               
chr11:77472054-77471720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 129
               

               
Conread position:
               
147-296
               

               
Cow position:
               
chr11:14707678-14707827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
147-475
               

               
Cow position:
               
chr11:42505772-42505434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
147-479
               

               
Cow position:
               
chr11:79970664-79971014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 273
               

               
Conread position:
               
148-326
               

               
Cow position:
               
chr11:7968394-7968578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
148-468
               

               
Cow position:
               
chr11:53513633-53513947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
148-472
               

               
Cow position:
               
chr11:25166847-25167174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
60, 230
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr11:54056068-54056397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr11:66871754-66871408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr11:24514685-24514350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr11:65372863-65373203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
148-482
               

               
Cow position:
               
chr11:42392950-42393288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
153-477
               

               
Cow position:
               
chr11:84387017-84386702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
156-484
               

               
Cow position:
               
chr11:48040634-48040973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
165-493
               

               
Cow position:
               
chr11:2327886-2328225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
38, 224
               

               
Conread position:
               
170-466
               

               
Cow position:
               
chr11:14144394-14144093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
175-452
               

               
Cow position:
               
chr11:71908403-71908131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
175-479
               

               
Cow position:
               
chr11:45475749-45476044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
175-485
               

               
Cow position:
               
chr11:39278366-39278690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
231-429
               

               
Cow position:
               
chr11:83643902-83643710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
280-477
               

               
Cow position:
               
chr11:73195013-73194820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
287-469
               

               
Cow position:
               
chr11:76697398-76697213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
287-476
               

               
Cow position:
               
chr11:37968896-37969085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
289-507
               

               
Cow position:
               
chr11:42042339-42042120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
197, 139
               

               
Conread position:
               
294-479
               

               
Cow position:
               
chr11:77632119-77632300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
317-477
               

               
Cow position:
               
chr11:41459510-41459667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
331-479
               

               
Cow position:
               
chr11:7969175-7969324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
125-370
               

               
Cow position:
               
chr12:31527083-31526835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
125-477
               

               
Cow position:
               
chr12:9591531-9591891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
125-479
               

               
Cow position:
               
chr12:40706541-40706895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
128-478
               

               
Cow position:
               
chr12:12737022-12736679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
129-479
               

               
Cow position:
               
chr12:25869542-25869911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
133-479
               

               
Cow position:
               
chr12:33257754-33257404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
135-431
               

               
Cow position:
               
chr12:2003785-2003483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
148-439
               

               
Cow position:
               
chr12:14316947-14316642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 174
               

               
Conread position:
               
148-466
               

               
Cow position:
               
chr12:10252970-10253304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 166
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr12:39178753-39179088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr12:13811474-13811823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr12:27601621-27601280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
148-489
               

               
Cow position:
               
chr12:36525404-36525755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
59, 120
               

               
Conread position:
               
148-489
               

               
Cow position:
               
chr12:41700480-41700826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
150-465
               

               
Cow position:
               
chr12:16918733-16918416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
151-477
               

               
Cow position:
               
chr12:10402532-10402195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 227
               

               
Conread position:
               
152-449
               

               
Cow position:
               
chr12:13028771-13029065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
155-497
               

               
Cow position:
               
chr12:45426929-45426606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
173, 52
               

               
Conread position:
               
174-473
               

               
Cow position:
               
chr12:22989917-22990213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
180-458
               

               
Cow position:
               
chr12:9580935-9580661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
292-468
               

               
Cow position:
               
chr12:28867767-28867588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
318-477
               

               
Cow position:
               
chr12:4934033-4933875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
329-476
               

               
Cow position:
               
chr12:33336419-33336271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
109-473
               

               
Cow position:
               
chr13:43153191-43153550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
109-473
               

               
Cow position:
               
chr13:43162130-43162487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
119-454
               

               
Cow position:
               
chr13:945405-945073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
135-463
               

               
Cow position:
               
chr13:39614037-39613728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
135-476
               

               
Cow position:
               
chr13:14739539-14739189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
135-493
               

               
Cow position:
               
chr13:38640923-38640573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
137-477
               

               
Cow position:
               
chr13:17791934-17791591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
73, 173
               

               
Conread position:
               
137-479
               

               
Cow position:
               
chr13:15984212-15983863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
148-350
               

               
Cow position:
               
chr13:18519185-18519384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
148-457
               

               
Cow position:
               
chr13:20773239-20772942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
148-475
               

               
Cow position:
               
chr13:15389391-15389710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr13:5927703-5927380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr13:15811985-15812328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
60, 256
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr13:26171808-26171484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr13:12532386-12532725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr13:29192422-29192085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
148-478
               

               
Cow position:
               
chr13:33490536-33490856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
148-480
               

               
Cow position:
               
chr13:17535690-17535357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 98
               

               
Conread position:
               
152-477
               

               
Cow position:
               
chr13:11980351-11980004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
165-471
               

               
Cow position:
               
chr13:8958628-8958327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
165-477
               

               
Cow position:
               
chr13:17564495-17564825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
166-476
               

               
Cow position:
               
chr13:6018617-6018934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
178-479
               

               
Cow position:
               
chr13:19852382-19852067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
191-482
               

               
Cow position:
               
chr13:15638238-15638539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
288-475
               

               
Cow position:
               
chr13:6753536-6753726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr13:29094178-29094362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr13:7732440-7732623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
338-499
               

               
Cow position:
               
chr13:17776199-17776039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
124-466
               

               
Cow position:
               
chr14:45259794-45260154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
127-362
               

               
Cow position:
               
chr14:41775235-41775000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-473
               

               
Cow position:
               
chr14:4779910-4780260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
129-473
               

               
Cow position:
               
chr14:21593661-21593309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
84, 139
               

               
Conread position:
               
133-477
               

               
Cow position:
               
chr14:1672060-1672402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 74
               

               
Conread position:
               
135-453
               

               
Cow position:
               
chr14:21185106-21185414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr14:22594157-22593922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
140-507
               

               
Cow position:
               
chr14:25124448-25124067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 310
               

               
Conread position:
               
148-283
               

               
Cow position:
               
chr14:43264983-43265119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
148-435
               

               
Cow position:
               
chr14:46298540-46298250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
148-446
               

               
Cow position:
               
chr14:1600027-1600323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr14:6765796-6765461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
151-442
               

               
Cow position:
               
chr14:13443289-13443012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
151-477
               

               
Cow position:
               
chr14:41469791-41469457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
11, 212
               

               
Conread position:
               
165-479
               

               
Cow position:
               
chr14:48821923-48822236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
166-471
               

               
Cow position:
               
chr14:7394976-7394676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
174-477
               

               
Cow position:
               
chr14:25414877-25415186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
175-483
               

               
Cow position:
               
chr14:19589394-19589073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
189-477
               

               
Cow position:
               
chr14:22982821-22983114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
303-475
               

               
Cow position:
               
chr14:27226225-27226397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
316-479
               

               
Cow position:
               
chr14:37708038-37708204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
127-477
               

               
Cow position:
               
chr15:1858407-1858757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
128-481
               

               
Cow position:
               
chr15:40209706-40210067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
129-333
               

               
Cow position:
               
chr15:28050921-28051133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
155, 78
               

               
Conread position:
               
129-483
               

               
Cow position:
               
chr15:41964257-41963905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 177
               

               
Conread position:
               
132-477
               

               
Cow position:
               
chr15:11684651-11684309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 178
               

               
Conread position:
               
135-462
               

               
Cow position:
               
chr15:22217201-22216872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
135-464
               

               
Cow position:
               
chr15:37425124-37424794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr15:46051691-46052030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr15:12053245-12052888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr15:21855829-21856176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
136-472
               

               
Cow position:
               
chr15:22131700-22132043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
147-473
               

               
Cow position:
               
chr15:34524392-34524071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
148-283
               

               
Cow position:
               
chr15:16716195-16716059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
148-385
               

               
Cow position:
               
chr15:25426478-25426718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
148-469
               

               
Cow position:
               
chr15:40788641-40788959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr15:5650616-5650271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr15:10823899-10823576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
137, 59
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr15:43842678-43843015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
149-479
               

               
Cow position:
               
chr15:16781815-16781463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
150-428
               

               
Cow position:
               
chr15:41959972-41959686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
167-476
               

               
Cow position:
               
chr15:15397818-15397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
168-477
               

               
Cow position:
               
chr15:6497476-6497159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
170-488
               

               
Cow position:
               
chr15:5998637-5998302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
174-499
               

               
Cow position:
               
chr15:18017608-18017272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 222
               

               
Conread position:
               
176-473
               

               
Cow position:
               
chr15:28052326-28052619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
187-503
               

               
Cow position:
               
chr15:10496302-10496624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr15:37727482-37727256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr15:41452046-41451850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
335-471
               

               
Cow position:
               
chr15:39996783-39996919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 122
               

               
Conread position:
               
111-479
               

               
Cow position:
               
chr16:29314829-29314457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
107, 72
               

               
Conread position:
               
125-497
               

               
Cow position:
               
chr16:40863737-40863370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 89
               

               
Conread position:
               
126-478
               

               
Cow position:
               
chr16:22873536-22873894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
130-478
               

               
Cow position:
               
chr16:9696617-9696973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
134-478
               

               
Cow position:
               
chr16:14434327-14434667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
135-427
               

               
Cow position:
               
chr16:29384756-29385053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
131, 262
               

               
Conread position:
               
135-472
               

               
Cow position:
               
chr16:8855231-8855582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
83, 183
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr16:30983543-30983193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
148-284
               

               
Cow position:
               
chr16:14285299-14285163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
148-445
               

               
Cow position:
               
chr16:20671368-20671666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
148-471
               

               
Cow position:
               
chr16:53680215-53680544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 166
               

               
Conread position:
               
148-474
               

               
Cow position:
               
chr16:16640590-16640249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
148-474
               

               
Cow position:
               
chr16:27839762-27840083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr16:1544840-1545179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr16:23758946-23759264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr16:51969173-51969518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
148-490
               

               
Cow position:
               
chr16:39171387-39171733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
150-468
               

               
Cow position:
               
chr16:37121243-37121569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr16:30959998-30960339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
155-453
               

               
Cow position:
               
chr16:28077938-28078249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
156-473
               

               
Cow position:
               
chr16:36134169-36134499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
170-471
               

               
Cow position:
               
chr16:52298305-52298603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
183-477
               

               
Cow position:
               
chr16:20884651-20884360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
288-472
               

               
Cow position:
               
chr16:30660035-30660217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
290-473
               

               
Cow position:
               
chr16:9471193-9471007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
128-471
               

               
Cow position:
               
chr17:13411960-13411618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
84, 154
               

               
Conread position:
               
147-479
               

               
Cow position:
               
chr17:44825316-44825661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
148-390
               

               
Cow position:
               
chr17:15738715-15738469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
148-425
               

               
Cow position:
               
chr17:17256594-17256317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
150-473
               

               
Cow position:
               
chr17:28115918-28116252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
158-465
               

               
Cow position:
               
chr17:39612249-39612561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
165-483
               

               
Cow position:
               
chr17:13075395-13075724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
290-471
               

               
Cow position:
               
chr17:26943322-26943498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
290-491
               

               
Cow position:
               
chr17:36000894-36001097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
307-477
               

               
Cow position:
               
chr17:1019256-1019425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
116-472
               

               
Cow position:
               
chr18:8276538-8276176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
121-475
               

               
Cow position:
               
chr18:17138001-17137654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
126-477
               

               
Cow position:
               
chr18:43256398-43256747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 106
               

               
Conread position:
               
127-475
               

               
Cow position:
               
chr18:6746826-6746466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
135-342
               

               
Cow position:
               
chr18:934144-934353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
135-472
               

               
Cow position:
               
chr18:40669313-40668968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
60, 187
               

               
Conread position:
               
137-476
               

               
Cow position:
               
chr18:35748456-35748808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
75, 105
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr18:35698690-35699046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
147-474
               

               
Cow position:
               
chr18:43377832-43378174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr18:42777807-42777465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
65, 176
               

               
Conread position:
               
148-473
               

               
Cow position:
               
chr18:32031878-32031543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr18:6797555-6797905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 206
               

               
Conread position:
               
149-479
               

               
Cow position:
               
chr18:29664252-29664588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
150-424
               

               
Cow position:
               
chr18:34598552-34598264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 170
               

               
Conread position:
               
151-401
               

               
Cow position:
               
chr18:24059005-24059253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
63, 136
               

               
Conread position:
               
167-472
               

               
Cow position:
               
chr18:21539606-21539914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
99, 182
               

               
Conread position:
               
171-477
               

               
Cow position:
               
chr18:18592827-18593151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
178-433
               

               
Cow position:
               
chr18:33204035-33203769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
211-478
               

               
Cow position:
               
chr18:2123631-2123897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
126-478
               

               
Cow position:
               
chr19:20040504-20040854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
73, 148
               

               
Conread position:
               
128-471
               

               
Cow position:
               
chr19:25666900-25666557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 154
               

               
Conread position:
               
129-450
               

               
Cow position:
               
chr19:33716137-33716464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
58, 155
               

               
Conread position:
               
136-461
               

               
Cow position:
               
chr19:25836314-25836654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 191
               

               
Conread position:
               
137-477
               

               
Cow position:
               
chr19:9113143-9112769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 213
               

               
Conread position:
               
148-394
               

               
Cow position:
               
chr19:47199723-47199968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
148-478
               

               
Cow position:
               
chr19:28621899-28621563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr19:55258994-55259316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
143, 17
               

               
Conread position:
               
151-512
               

               
Cow position:
               
chr19:4265710-4266072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
154-395
               

               
Cow position:
               
chr19:8530865-8530618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
167-471
               

               
Cow position:
               
chr19:976498-976816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
175-473
               

               
Cow position:
               
chr19:25841266-25840961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
175-476
               

               
Cow position:
               
chr19:21859500-21859826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
178-477
               

               
Cow position:
               
chr19:15504759-15505060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
187-473
               

               
Cow position:
               
chr19:2954875-2954588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
290-495
               

               
Cow position:
               
chr19:23823361-23823155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
316-468
               

               
Cow position:
               
chr19:33180272-33180423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
324-479
               

               
Cow position:
               
chr19:15875993-15875836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
326-479
               

               
Cow position:
               
chr19:43505785-43505939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
96-444
               

               
Cow position:
               
chr2:67491409-67491766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
125-488
               

               
Cow position:
               
chr2:64902124-64901758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
126-479
               

               
Cow position:
               
chr2:2729302-2729671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
127-478
               

               
Cow position:
               
chr2:46922251-46921882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
129-479
               

               
Cow position:
               
chr2:37659801-37659451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
133-450
               

               
Cow position:
               
chr2:58204832-58205162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
135-459
               

               
Cow position:
               
chr2:14766577-14766250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
135-473
               

               
Cow position:
               
chr2:38282832-38283177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
75, 208
               

               
Conread position:
               
135-476
               

               
Cow position:
               
chr2:74375961-74376315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr2:54069150-54068807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 177
               

               
Conread position:
               
136-479
               

               
Cow position:
               
chr2:13176685-13176322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
137-469
               

               
Cow position:
               
chr2:74373766-74374110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
51, 233
               

               
Conread position:
               
144-478
               

               
Cow position:
               
chr2:62977746-62978076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
147-418
               

               
Cow position:
               
chr2:62671544-62671823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
147-431
               

               
Cow position:
               
chr2:4213890-4214187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 196
               

               
Conread position:
               
147-473
               

               
Cow position:
               
chr2:55301468-55301132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 177
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr2:55067787-55068122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
148-283
               

               
Cow position:
               
chr2:47401372-47401238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
148-355
               

               
Cow position:
               
chr2:34494243-34494037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr2:26439578-26439883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
148-457
               

               
Cow position:
               
chr2:35732470-35732147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
148-461
               

               
Cow position:
               
chr2:80967789-80968096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
179, 80
               

               
Conread position:
               
148-462
               

               
Cow position:
               
chr2:84762175-84761848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
148-464
               

               
Cow position:
               
chr2:67943209-67942887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
83, 101
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr2:4770474-4770141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 236
               

               
Conread position:
               
148-478
               

               
Cow position:
               
chr2:67041382-67041059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
148-488
               

               
Cow position:
               
chr2:50112576-50112231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
149-479
               

               
Cow position:
               
chr2:48447086-48446771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
150-473
               

               
Cow position:
               
chr2:81159391-81159715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
150-476
               

               
Cow position:
               
chr2:79586274-79586616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
153-469
               

               
Cow position:
               
chr2:43682117-43682451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
6, 59
               

               
Conread position:
               
154-456
               

               
Cow position:
               
chr2:12832821-12833120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr2:32195860-32196231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr2:35761071-35760879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
290-518
               

               
Cow position:
               
chr2:41916723-41916949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
321-476
               

               
Cow position:
               
chr2:17368323-17368476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
321-491
               

               
Cow position:
               
chr2:72283027-72282855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
114-477
               

               
Cow position:
               
chr20:14408425-14408051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
120-476
               

               
Cow position:
               
chr20:10379167-10378811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr20:38029980-38030138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
128-474
               

               
Cow position:
               
chr20:24428304-24428633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr20:3800754-3800399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 172
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr20:28521596-28521930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 182
               

               
Conread position:
               
137-467
               

               
Cow position:
               
chr20:36738474-36738133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
139-477
               

               
Cow position:
               
chr20:1274575-1274912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
147-352
               

               
Cow position:
               
chr20:9215920-9216125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
148-378
               

               
Cow position:
               
chr20:13156542-13156300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr20:12838472-12838168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 116
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr20:32873057-32873363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
148-460
               

               
Cow position:
               
chr20:8264982-8264662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
149-454
               

               
Cow position:
               
chr20:5085700-5085390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
150-470
               

               
Cow position:
               
chr20:29965873-29966196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
150-472
               

               
Cow position:
               
chr20:26063864-26064200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
151-457
               

               
Cow position:
               
chr20:23282139-23281832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
161-477
               

               
Cow position:
               
chr20:25290055-25290399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 165
               

               
Conread position:
               
163-450
               

               
Cow position:
               
chr20:3523266-3523559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
175-477
               

               
Cow position:
               
chr20:14998202-14997892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
176-471
               

               
Cow position:
               
chr20:36399873-36399572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
308-476
               

               
Cow position:
               
chr20:26036216-26036384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
322-473
               

               
Cow position:
               
chr20:23597028-23596876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
325-475
               

               
Cow position:
               
chr20:10310179-10310030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
127-438
               

               
Cow position:
               
chr21:40886686-40886993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 128
               

               
Conread position:
               
128-479
               

               
Cow position:
               
chr21:24161980-24161622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
133-367
               

               
Cow position:
               
chr21:2727995-2728220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
152, 75
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr21:41811280-41811615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
148-410
               

               
Cow position:
               
chr21:47198327-47198593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 210
               

               
Conread position:
               
148-463
               

               
Cow position:
               
chr21:4510803-4511122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr21:33717767-33718090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
148-489
               

               
Cow position:
               
chr21:30880153-30880511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 288
               

               
Conread position:
               
149-460
               

               
Cow position:
               
chr21:37559321-37559638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
149-479
               

               
Cow position:
               
chr21:5060842-5061173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
150-475
               

               
Cow position:
               
chr21:24566993-24567310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
151-457
               

               
Cow position:
               
chr21:34859552-34859240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
142, 188
               

               
Conread position:
               
154-476
               

               
Cow position:
               
chr21:14507147-14506813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
167-478
               

               
Cow position:
               
chr21:12976834-12977152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
186-493
               

               
Cow position:
               
chr21:30683309-30683611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
228-476
               

               
Cow position:
               
chr21:13508134-13507889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
114-495
               

               
Cow position:
               
chr22:24473788-24473405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 7
               

               
Conread position:
               
121-477
               

               
Cow position:
               
chr22:7307316-7307678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
124-477
               

               
Cow position:
               
chr22:32004293-32004656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
89, 5
               

               
Conread position:
               
126-353
               

               
Cow position:
               
chr22:4254184-4254418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
126-436
               

               
Cow position:
               
chr22:29833320-29833636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
133-253
               

               
Cow position:
               
chr22:7299567-7299446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
135-471
               

               
Cow position:
               
chr22:44634258-44633926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
75, 121
               

               
Conread position:
               
135-473
               

               
Cow position:
               
chr22:5700818-5701149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
85, 113
               

               
Conread position:
               
137-484
               

               
Cow position:
               
chr22:35711355-35711706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 181
               

               
Conread position:
               
137-501
               

               
Cow position:
               
chr22:42940551-42940918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
139-389
               

               
Cow position:
               
chr22:33639050-33639309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
148-451
               

               
Cow position:
               
chr22:28573626-28573308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 135
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr22:18261885-18261590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
148-473
               

               
Cow position:
               
chr22:35778515-35778841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr22:29609709-29610048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
60, 239
               

               
Conread position:
               
149-473
               

               
Cow position:
               
chr22:38741332-38741004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr22:19285111-19284777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 201
               

               
Conread position:
               
151-472
               

               
Cow position:
               
chr22:22615422-22615109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
151-475
               

               
Cow position:
               
chr22:3766807-3766483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 112
               

               
Conread position:
               
176-486
               

               
Cow position:
               
chr22:6616296-6616622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
192-484
               

               
Cow position:
               
chr22:8704264-8704564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
212-479
               

               
Cow position:
               
chr22:43267282-43267006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
221-478
               

               
Cow position:
               
chr22:26249344-26249082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
57, 195
               

               
Conread position:
               
290-472
               

               
Cow position:
               
chr22:29570257-29570072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
293-488
               

               
Cow position:
               
chr22:28399066-28399261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
328-479
               

               
Cow position:
               
chr22:32849387-32849237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
120-444
               

               
Cow position:
               
chr23:29313112-29312788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 187
               

               
Conread position:
               
133-282
               

               
Cow position:
               
chr23:16030580-16030429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
139-479
               

               
Cow position:
               
chr23:36364522-36364875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
143-523
               

               
Cow position:
               
chr23:37321191-37320808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
147-458
               

               
Cow position:
               
chr23:7585796-7586102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 161
               

               
Conread position:
               
147-470
               

               
Cow position:
               
chr23:37180138-37179808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr23:37627797-37627455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 180
               

               
Conread position:
               
148-486
               

               
Cow position:
               
chr23:8242659-8242998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr23:1982003-1982338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
151-283
               

               
Cow position:
               
chr23:14167943-14168076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
152-477
               

               
Cow position:
               
chr23:12005280-12004951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
175-471
               

               
Cow position:
               
chr23:27671116-27671414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
177-479
               

               
Cow position:
               
chr23:33417247-33416929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
182-475
               

               
Cow position:
               
chr23:14128989-14129292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr23:16488000-16487815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
175, 19
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr23:7005615-7005428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
309-508
               

               
Cow position:
               
chr23:31088875-31089075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
316-488
               

               
Cow position:
               
chr23:25857394-25857219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
127-490
               

               
Cow position:
               
chr24:37832839-37833211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
139-283
               

               
Cow position:
               
chr24:9789436-9789584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
139-479
               

               
Cow position:
               
chr24:23219916-23219575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
139-489
               

               
Cow position:
               
chr24:36358363-36358724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
147-479
               

               
Cow position:
               
chr24:13064282-13063959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
148-457
               

               
Cow position:
               
chr24:11809322-11809632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
148-467
               

               
Cow position:
               
chr24:23570061-23570400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
148-474
               

               
Cow position:
               
chr24:22879465-22879786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr24:24483387-24483729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 170
               

               
Conread position:
               
152-476
               

               
Cow position:
               
chr24:32679391-32679058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
287-470
               

               
Cow position:
               
chr24:7758413-7758596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
291-489
               

               
Cow position:
               
chr24:34536352-34536549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
327-479
               

               
Cow position:
               
chr24:39230305-39230154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
129-479
               

               
Cow position:
               
chr25:16943971-16944324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
130-476
               

               
Cow position:
               
chr25:15271048-15270687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
133-477
               

               
Cow position:
               
chr25:9846022-9846359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 114
               

               
Conread position:
               
135-446
               

               
Cow position:
               
chr25:21548338-21548646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
135-451
               

               
Cow position:
               
chr25:5195839-5195523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
135-454
               

               
Cow position:
               
chr25:26048779-26049099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
73, 121
               

               
Conread position:
               
135-476
               

               
Cow position:
               
chr25:26969666-26970014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 72
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr25:22915457-22915143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
148-473
               

               
Cow position:
               
chr25:27436000-27436343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr25:11574767-11575104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
148-494
               

               
Cow position:
               
chr25:11177458-11177805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 247
               

               
Conread position:
               
166-473
               

               
Cow position:
               
chr25:15315007-15315318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
167-505
               

               
Cow position:
               
chr25:30145826-30146177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
241-479
               

               
Cow position:
               
chr25:16910304-16910549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
287-474
               

               
Cow position:
               
chr25:8527374-8527187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
290-473
               

               
Cow position:
               
chr25:14885711-14885533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr25:11992001-11992192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
291-484
               

               
Cow position:
               
chr25:7188032-7187837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
318-482
               

               
Cow position:
               
chr25:2412326-2412492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
336-473
               

               
Cow position:
               
chr25:16574124-16573988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
129-502
               

               
Cow position:
               
chr26:2503830-2504195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
135-458
               

               
Cow position:
               
chr26:25447191-25446879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
137-470
               

               
Cow position:
               
chr26:15700626-15700951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
147-455
               

               
Cow position:
               
chr26:22885546-22885235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 173
               

               
Conread position:
               
147-471
               

               
Cow position:
               
chr26:25444253-25443945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
148-283
               

               
Cow position:
               
chr26:22682339-22682204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr26:27540466-27540119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
148-488
               

               
Cow position:
               
chr26:19363579-19363933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
149-490
               

               
Cow position:
               
chr26:10746156-10746505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
151-454
               

               
Cow position:
               
chr26:22646259-22645948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
165-476
               

               
Cow position:
               
chr26:20163266-20162960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
170-454
               

               
Cow position:
               
chr26:27271870-27272162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
42, 286
               

               
Conread position:
               
175-477
               

               
Cow position:
               
chr26:6836066-6836380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
186-471
               

               
Cow position:
               
chr26:20767627-20767926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
191-478
               

               
Cow position:
               
chr26:15065398-15065102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
129-455
               

               
Cow position:
               
chr27:3639502-3639174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr27:18687858-18687528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
165-471
               

               
Cow position:
               
chr27:30847141-30847457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
179-471
               

               
Cow position:
               
chr27:22178311-22178612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 139
               

               
Conread position:
               
182-478
               

               
Cow position:
               
chr27:420453-420748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
288-477
               

               
Cow position:
               
chr27:15757685-15757496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
291-473
               

               
Cow position:
               
chr27:17756563-17756743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
316-472
               

               
Cow position:
               
chr27:5024268-5024423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
124-458
               

               
Cow position:
               
chr28:7764526-7764184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 191
               

               
Conread position:
               
126-477
               

               
Cow position:
               
chr28:11406157-11406518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 31
               

               
Conread position:
               
128-477
               

               
Cow position:
               
chr28:25296-25643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
133-469
               

               
Cow position:
               
chr28:14671915-14672248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 189
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr28:23602703-23603051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
122, 48
               

               
Conread position:
               
139-454
               

               
Cow position:
               
chr28:3669422-3669099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
146, 154
               

               
Conread position:
               
147-491
               

               
Cow position:
               
chr28:19353273-19353608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
148-471
               

               
Cow position:
               
chr28:19140559-19140889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
151-479
               

               
Cow position:
               
chr28:11590248-11590585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
153-478
               

               
Cow position:
               
chr28:16010340-16010675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
165-480
               

               
Cow position:
               
chr28:9074670-9074995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
176-447
               

               
Cow position:
               
chr28:29871893-29872166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
288-483
               

               
Cow position:
               
chr28:30501694-30501503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
127-456
               

               
Cow position:
               
chr29:19376094-19376419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
133-465
               

               
Cow position:
               
chr29:18590510-18590853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
133-477
               

               
Cow position:
               
chr29:27614591-27614923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr29:5607915-5607671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 179
               

               
Conread position:
               
135-473
               

               
Cow position:
               
chr29:1767229-1766888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
148-281
               

               
Cow position:
               
chr29:25407332-25407465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
148-470
               

               
Cow position:
               
chr29:3776569-3776880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
148-473
               

               
Cow position:
               
chr29:6173200-6172861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr29:36739779-36740110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
148-490
               

               
Cow position:
               
chr29:11479999-11479653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 158
               

               
Conread position:
               
151-460
               

               
Cow position:
               
chr29:38416957-38416640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
159-405
               

               
Cow position:
               
chr29:30115207-30115454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 151
               

               
Conread position:
               
182-475
               

               
Cow position:
               
chr29:2486165-2486455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
185-477
               

               
Cow position:
               
chr29:5096693-5096400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
353-483
               

               
Cow position:
               
chr29:9148308-9148178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
125-477
               

               
Cow position:
               
chr3:11971114-11970762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
160, 129
               

               
Conread position:
               
126-454
               

               
Cow position:
               
chr3:29619525-29619861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
128-476
               

               
Cow position:
               
chr3:42273449-42273814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
153, 77
               

               
Conread position:
               
129-454
               

               
Cow position:
               
chr3:49232757-49232430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
129-479
               

               
Cow position:
               
chr3:64678434-64678084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
135-283
               

               
Cow position:
               
chr3:52858864-52858715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
135-467
               

               
Cow position:
               
chr3:56502995-56503333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 194
               

               
Conread position:
               
135-476
               

               
Cow position:
               
chr3:7151619-7151968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr3:36061571-36061217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
135-483
               

               
Cow position:
               
chr3:25015918-25016283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
34, 271
               

               
Conread position:
               
136-474
               

               
Cow position:
               
chr3:6678633-6678973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 218
               

               
Conread position:
               
137-476
               

               
Cow position:
               
chr3:20840066-20840386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
139-477
               

               
Cow position:
               
chr3:11597223-11597558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
145-477
               

               
Cow position:
               
chr3:52476331-52476002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
148-351
               

               
Cow position:
               
chr3:69878368-69878161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
148-455
               

               
Cow position:
               
chr3:30339557-30339234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
148-475
               

               
Cow position:
               
chr3:44391747-44392085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 179
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr3:25883426-25883102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr3:72048607-72048276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr3:79051632-79051306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
148-488
               

               
Cow position:
               
chr3:74057410-74057049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr3:69466650-69466995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
161-479
               

               
Cow position:
               
chr3:73944614-73944943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 132
               

               
Conread position:
               
166-457
               

               
Cow position:
               
chr3:66925250-66925545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
166-471
               

               
Cow position:
               
chr3:288036-288343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
174-484
               

               
Cow position:
               
chr3:42012449-42012126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
182-459
               

               
Cow position:
               
chr3:83729459-83729739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 135
               

               
Conread position:
               
187-479
               

               
Cow position:
               
chr3:59062358-59062651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 101
               

               
Conread position:
               
195-479
               

               
Cow position:
               
chr3:22632247-22631952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
279-464
               

               
Cow position:
               
chr3:74064303-74064118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
288-473
               

               
Cow position:
               
chr3:48574511-48574695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
292-478
               

               
Cow position:
               
chr3:13499983-13500164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
317-489
               

               
Cow position:
               
chr3:11294721-11294550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
98-451
               

               
Cow position:
               
chr4:3593666-3593304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
122-458
               

               
Cow position:
               
chr4:11575885-11576219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 100
               

               
Conread position:
               
126-460
               

               
Cow position:
               
chr4:44583414-44583758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 272
               

               
Conread position:
               
128-450
               

               
Cow position:
               
chr4:49951587-49951264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
128-477
               

               
Cow position:
               
chr4:10434635-10434277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
129-479
               

               
Cow position:
               
chr4:23792264-23791916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
133-455
               

               
Cow position:
               
chr4:32053611-32053945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 223
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr4:40559030-40558688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 184
               

               
Conread position:
               
133-472
               

               
Cow position:
               
chr4:64656151-64656476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr4:14219924-14219572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr4:28353664-28354012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
84, 181
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr4:43448779-43449129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
73, 261
               

               
Conread position:
               
135-482
               

               
Cow position:
               
chr4:26950120-26949758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
139-485
               

               
Cow position:
               
chr4:21566813-21566465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
142-477
               

               
Cow position:
               
chr4:23883230-23883560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
148-392
               

               
Cow position:
               
chr4:60600521-60600760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr4:49454345-49454030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
148-475
               

               
Cow position:
               
chr4:4665274-4664952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr4:11534592-11534260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr4:43466739-43466400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
150-467
               

               
Cow position:
               
chr4:17212391-17212722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 283
               

               
Conread position:
               
150-471
               

               
Cow position:
               
chr4:34904677-34904347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 175
               

               
Conread position:
               
152-479
               

               
Cow position:
               
chr4:35160464-35160134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
153-488
               

               
Cow position:
               
chr4:60197315-60197657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
167-473
               

               
Cow position:
               
chr4:50223529-50223214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
170-452
               

               
Cow position:
               
chr4:39221877-39221599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 127
               

               
Conread position:
               
170-477
               

               
Cow position:
               
chr4:26924871-26924565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
173-476
               

               
Cow position:
               
chr4:19195962-19195658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
182-475
               

               
Cow position:
               
chr4:39782012-39781710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
182-479
               

               
Cow position:
               
chr4:53962823-53962513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
188-487
               

               
Cow position:
               
chr4:44837953-44837652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
198-479
               

               
Cow position:
               
chr4:58494441-58494724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
227-477
               

               
Cow position:
               
chr4:55245304-55245046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
286-477
               

               
Cow position:
               
chr4:15238602-15238792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
287-483
               

               
Cow position:
               
chr4:31191926-31191732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
288-466
               

               
Cow position:
               
chr4:30572052-30571875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
324-479
               

               
Cow position:
               
chr4:52340789-52340637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
111-479
               

               
Cow position:
               
chr5:11365438-11365059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
114-452
               

               
Cow position:
               
chr5:40339893-40340233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
121-284
               

               
Cow position:
               
chr5:32250750-32250593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
124-473
               

               
Cow position:
               
chr5:25042953-25042609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
126-476
               

               
Cow position:
               
chr5:35957146-35956789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 276
               

               
Conread position:
               
129-450
               

               
Cow position:
               
chr5:67672559-67672897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
133-436
               

               
Cow position:
               
chr5:38946845-38946556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 107
               

               
Conread position:
               
135-425
               

               
Cow position:
               
chr5:50719559-50719856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
135-473
               

               
Cow position:
               
chr5:25897733-25898067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
77, 99
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr5:14310288-14309930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 76
               

               
Conread position:
               
141-477
               

               
Cow position:
               
chr5:30075174-30075523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
148-283
               

               
Cow position:
               
chr5:17931270-17931405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 120
               

               
Conread position:
               
148-452
               

               
Cow position:
               
chr5:22196099-22195791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
64, 169
               

               
Conread position:
               
148-454
               

               
Cow position:
               
chr5:37939497-37939205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
63, 107
               

               
Conread position:
               
148-471
               

               
Cow position:
               
chr5:33305119-33304802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr5:43925452-43925793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
14, 264
               

               
Conread position:
               
149-477
               

               
Cow position:
               
chr5:5402859-5402533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 133
               

               
Conread position:
               
150-473
               

               
Cow position:
               
chr5:48384721-48385047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
150-476
               

               
Cow position:
               
chr5:11792771-11793097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
152-395
               

               
Cow position:
               
chr5:5453106-5453346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
153-350
               

               
Cow position:
               
chr5:50224871-50224668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
166-471
               

               
Cow position:
               
chr5:17355222-17354909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
42, 236
               

               
Conread position:
               
169-475
               

               
Cow position:
               
chr5:6939657-6939982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
178-477
               

               
Cow position:
               
chr5:21121235-21120939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr5:5207992-5208284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
183-476
               

               
Cow position:
               
chr5:13077198-13077501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 216
               

               
Conread position:
               
213-476
               

               
Cow position:
               
chr5:46521020-46521274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
289-477
               

               
Cow position:
               
chr5:40901157-40900966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
163, 28
               

               
Conread position:
               
133-476
               

               
Cow position:
               
chr6:47813489-47813147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 178
               

               
Conread position:
               
135-471
               

               
Cow position:
               
chr6:5100821-5101155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr6:16716973-16717307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
135-479
               

               
Cow position:
               
chr6:8461934-8461585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr6:23493488-23493859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 302
               

               
Conread position:
               
137-470
               

               
Cow position:
               
chr6:58453351-58453687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
139-454
               

               
Cow position:
               
chr6:18871837-18872167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 279
               

               
Conread position:
               
139-473
               

               
Cow position:
               
chr6:29298454-29298115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
139-474
               

               
Cow position:
               
chr6:54386875-54387221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
139-479
               

               
Cow position:
               
chr6:27194769-27195094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
139-495
               

               
Cow position:
               
chr6:29300724-29300363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
147-470
               

               
Cow position:
               
chr6:23687402-23687728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
147-472
               

               
Cow position:
               
chr6:30340696-30341029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 171
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr6:20542679-20542347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
148-425
               

               
Cow position:
               
chr6:42149747-42150020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 141
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr6:48558007-48557691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
78, 160
               

               
Conread position:
               
148-463
               

               
Cow position:
               
chr6:57821376-57821703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
148-470
               

               
Cow position:
               
chr6:51896178-51896497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr6:38763321-38763009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chr6:23701795-23701455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr6:2404123-2404452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
149-476
               

               
Cow position:
               
chr6:21338239-21338567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr6:18126511-18126189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
150-497
               

               
Cow position:
               
chr6:34700399-34700055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
151-495
               

               
Cow position:
               
chr6:2954756-2954403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
153-460
               

               
Cow position:
               
chr6:62267796-62268109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 172
               

               
Conread position:
               
156-469
               

               
Cow position:
               
chr6:2988925-2988601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
157-475
               

               
Cow position:
               
chr6:67830915-67831239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
177-462
               

               
Cow position:
               
chr6:23447889-23447591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
177-480
               

               
Cow position:
               
chr6:61993727-61994026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
179-482
               

               
Cow position:
               
chr6:45742731-45743042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
256-479
               

               
Cow position:
               
chr6:53696110-53696335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
286-456
               

               
Cow position:
               
chr6:23896734-23896899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
288-472
               

               
Cow position:
               
chr6:22880857-22880677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
290-472
               

               
Cow position:
               
chr6:29868554-29868374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
120-492
               

               
Cow position:
               
chr7:58793442-58793065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
126-472
               

               
Cow position:
               
chr7:26620319-26619973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
127-489
               

               
Cow position:
               
chr7:37003806-37003449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
128-477
               

               
Cow position:
               
chr7:7557241-7556897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
128-495
               

               
Cow position:
               
chr7:64897713-64898090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 199
               

               
Conread position:
               
135-341
               

               
Cow position:
               
chr7:37439925-37439725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
135-419
               

               
Cow position:
               
chr7:31112390-31112104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
137-406
               

               
Cow position:
               
chr7:9469015-9469299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 181
               

               
Conread position:
               
137-482
               

               
Cow position:
               
chr7:53169661-53169299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
148-416
               

               
Cow position:
               
chr7:57021176-57021451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
148-447
               

               
Cow position:
               
chr7:7520484-7520788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
148-455
               

               
Cow position:
               
chr7:18940251-18939932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
148-470
               

               
Cow position:
               
chr7:63376456-63376132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
148-473
               

               
Cow position:
               
chr7:17392722-17392387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chr7:36917610-36917922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr7:19366965-19366634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
149-476
               

               
Cow position:
               
chr7:51527721-51527380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
149-479
               

               
Cow position:
               
chr7:2409634-2409972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr7:19972232-19971897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 175
               

               
Conread position:
               
153-476
               

               
Cow position:
               
chr7:6534989-6535312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
167-488
               

               
Cow position:
               
chr7:3182367-3182673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
170-476
               

               
Cow position:
               
chr7:64270627-64270307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
178-418
               

               
Cow position:
               
chr7:44473476-44473723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 142
               

               
Conread position:
               
187-477
               

               
Cow position:
               
chr7:38374824-38374522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
288-477
               

               
Cow position:
               
chr7:22459640-22459453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
289-475
               

               
Cow position:
               
chr7:2490640-2490456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr7:48473538-48473722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
290-479
               

               
Cow position:
               
chr7:29941746-29941563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
292-471
               

               
Cow position:
               
chr7:65605843-65606023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
294-478
               

               
Cow position:
               
chr7:5516238-5516421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
312-477
               

               
Cow position:
               
chr7:21922247-21922419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
114-278
               

               
Cow position:
               
chr8:32227775-32227611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
135-468
               

               
Cow position:
               
chr8:13467794-13468128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 119
               

               
Conread position:
               
135-476
               

               
Cow position:
               
chr8:33092878-33093211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr8:39064958-39065317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
140-477
               

               
Cow position:
               
chr8:11891589-11891932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 79
               

               
Conread position:
               
145-471
               

               
Cow position:
               
chr8:47148402-47148082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
147-482
               

               
Cow position:
               
chr8:11934435-11934772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
147-502
               

               
Cow position:
               
chr8:24115637-24115276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
148-391
               

               
Cow position:
               
chr8:4510966-4511202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
148-450
               

               
Cow position:
               
chr8:17062881-17063172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
148-470
               

               
Cow position:
               
chr8:33623720-33623409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
60, 104
               

               
Conread position:
               
149-477
               

               
Cow position:
               
chr8:46972179-46971834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
149-479
               

               
Cow position:
               
chr8:22015136-22015479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 32
               

               
Conread position:
               
150-390
               

               
Cow position:
               
chr8:10628647-10628397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr8:22449422-22449104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 193
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr8:37685661-37685326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
150-478
               

               
Cow position:
               
chr8:36955800-36955471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
151-475
               

               
Cow position:
               
chr8:3694975-3694643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr8:50471697-50471992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
54, 201
               

               
Conread position:
               
154-454
               

               
Cow position:
               
chr8:20883427-20883740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
167-488
               

               
Cow position:
               
chr8:22036986-22036649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
179-477
               

               
Cow position:
               
chr8:8737728-8738017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
220-477
               

               
Cow position:
               
chr8:22282439-22282188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
288-470
               

               
Cow position:
               
chr8:45069033-45068851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
290-473
               

               
Cow position:
               
chr8:3702357-3702177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr8:49202489-49202671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
290-480
               

               
Cow position:
               
chr8:5933211-5933405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
293-454
               

               
Cow position:
               
chr8:51510163-51510323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
293-479
               

               
Cow position:
               
chr8:25246362-25246178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
124-486
               

               
Cow position:
               
chr9:30759018-30758647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
128-476
               

               
Cow position:
               
chr9:12693000-12692636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
85, 120
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr9:46248627-46248975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 90
               

               
Conread position:
               
141-474
               

               
Cow position:
               
chr9:27331902-27332239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 203
               

               
Conread position:
               
147-273
               

               
Cow position:
               
chr9:15821485-15821609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
147-475
               

               
Cow position:
               
chr9:21251923-21252264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chr9:40278962-40278629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
148-411
               

               
Cow position:
               
chr9:49746086-49745822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
148-425
               

               
Cow position:
               
chr9:30332015-30332291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
148-473
               

               
Cow position:
               
chr9:37173111-37172796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
148-491
               

               
Cow position:
               
chr9:27383076-27383424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
148-502
               

               
Cow position:
               
chr9:55004291-55003925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
150-477
               

               
Cow position:
               
chr9:28433678-28433344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
150-486
               

               
Cow position:
               
chr9:12382067-12382409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
152-474
               

               
Cow position:
               
chr9:44178041-44178367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
161-477
               

               
Cow position:
               
chr9:9604350-9604024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
171-464
               

               
Cow position:
               
chr9:59179142-59178846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
174-492
               

               
Cow position:
               
chr9:40627429-40627756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
194-475
               

               
Cow position:
               
chr9:42848231-42848524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
288-471
               

               
Cow position:
               
chr9:33172502-33172680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
290-475
               

               
Cow position:
               
chr9:56730946-56731130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
293-476
               

               
Cow position:
               
chr9:28978325-28978504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
311-487
               

               
Cow position:
               
chr9:42795007-42795184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
111-474
               

               
Cow position:
               
chrX:28090848-28090476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
116-444
               

               
Cow position:
               
chrX:41241087-41241414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
121-270
               

               
Cow position:
               
chrX:29534381-29534230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
121-278
               

               
Cow position:
               
chrX:23897449-23897293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
121-470
               

               
Cow position:
               
chrX:4085077-4084727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
127-275
               

               
Cow position:
               
chrX:35228538-35228388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
133-466
               

               
Cow position:
               
chrX:31265828-31266175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 182
               

               
Conread position:
               
133-477
               

               
Cow position:
               
chrX:8929667-8929317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 112
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chrX:29475698-29476044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 183
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chrX:33762634-33762287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chrX:41243596-41243266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
137-477
               

               
Cow position:
               
chrX:4280324-4280674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 188
               

               
Conread position:
               
147-284
               

               
Cow position:
               
chrX:36078650-36078513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
147-449
               

               
Cow position:
               
chrX:7996517-7996209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
147-477
               

               
Cow position:
               
chrX:34795194-34795535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
148-267
               

               
Cow position:
               
chrX:17713744-17713624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
148-475
               

               
Cow position:
               
chrX:7431918-7431589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
13, 191
               

               
Conread position:
               
148-476
               

               
Cow position:
               
chrX:10989782-10990122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chrX:7460088-7459745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chrX:33779715-33779373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 169
               

               
Conread position:
               
148-477
               

               
Cow position:
               
chrX:38890255-38890596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
148-486
               

               
Cow position:
               
chrX:43786260-43786607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 201
               

               
Conread position:
               
149-419
               

               
Cow position:
               
chrX:35552085-35551813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
149-460
               

               
Cow position:
               
chrX:27379377-27379688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
151-477
               

               
Cow position:
               
chrX:38173796-38174128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
165-481
               

               
Cow position:
               
chrX:36101758-36101434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
167-442
               

               
Cow position:
               
chrX:28822316-28822607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
172-479
               

               
Cow position:
               
chrX:2067291-2066984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
182-476
               

               
Cow position:
               
chrX:25361211-25361523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
203-482
               

               
Cow position:
               
chrX:44215021-44214746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
286-477
               

               
Cow position:
               
chrX:14137534-14137342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
287-480
               

               
Cow position:
               
chrX:15364611-15364804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
288-477
               

               
Cow position:
               
chrX:29524652-29524839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
288-479
               

               
Cow position:
               
chrX:19673024-19673224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
290-473
               

               
Cow position:
               
chrX:14602644-14602461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
293-479
               

               
Cow position:
               
chrX:39878191-39878007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
318-477
               

               
Cow position:
               
chrX:30942391-30942233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 85