Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rsag020_e16.5
        

               Conread position:
               1-273
               

               Cow position:
               chr1:28492075-28492339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               156, 13
               

               Conread position:
               1-323
               

               Cow position:
               chr1:61221368-61221035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               1-328
               

               Cow position:
               chr1:30672794-30672463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               5-251
               

               Cow position:
               chr1:48266054-48265809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               167, 9
               

               Conread position:
               5-273
               

               Cow position:
               chr1:37308943-37309218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               8-306
               

               Cow position:
               chr1:71020828-71021117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               8-323
               

               Cow position:
               chr1:37466289-37466608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 144
               

               Conread position:
               10-313
               

               Cow position:
               chr1:56080803-56081124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               11-492
               

               Cow position:
               chr1:66218732-66218242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 21
               

               Conread position:
               13-323
               

               Cow position:
               chr1:56643966-56644282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               146, 15
               

               Conread position:
               13-343
               

               Cow position:
               chr1:37556354-37556009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               14-179
               

               Cow position:
               chr1:65059652-65059487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 72
               

               Conread position:
               14-323
               

               Cow position:
               chr1:41277236-41277560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               16-200
               

               Cow position:
               chr1:51848583-51848772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               143, 135
               

               Conread position:
               29-323
               

               Cow position:
               chr1:35731895-35732211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               29-419
               

               Cow position:
               chr1:26053230-26053628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 29
               

               Conread position:
               39-290
               

               Cow position:
               chr1:51257500-51257243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               139, 112
               

               Conread position:
               39-290
               

               Cow position:
               chr1:79754398-79754660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               39-321
               

               Cow position:
               chr1:43221166-43221466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               61, 48
               

               Conread position:
               39-323
               

               Cow position:
               chr1:73244382-73244088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               41-257
               

               Cow position:
               chr1:61702744-61702962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               117, 25
               

               Conread position:
               44-243
               

               Cow position:
               chr1:64327201-64326996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               114, 52
               

               Conread position:
               52-332
               

               Cow position:
               chr1:93858408-93858120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               59-332
               

               Cow position:
               chr1:57571723-57571430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               60-332
               

               Cow position:
               chr1:30785654-30785942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 93
               

               Conread position:
               61-332
               

               Cow position:
               chr1:88298098-88297807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               62-328
               

               Cow position:
               chr1:2788806-2788520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               75-323
               

               Cow position:
               chr1:23117335-23117601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-408
               

               Cow position:
               chr10:29185388-29184979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               4-273
               

               Cow position:
               chr10:34810931-34810661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               153, 10
               

               Conread position:
               5-215
               

               Cow position:
               chr10:51427602-51427396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               5-254
               

               Cow position:
               chr10:13855926-13855675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               5-257
               

               Cow position:
               chr10:25976152-25975896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               143, 9
               

               Conread position:
               5-290
               

               Cow position:
               chr10:4019447-4019160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               138, 9
               

               Conread position:
               5-291
               

               Cow position:
               chr10:50600196-50600480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               5-332
               

               Cow position:
               chr10:25012818-25013149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               8-323
               

               Cow position:
               chr10:35443866-35443546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               11-341
               

               Cow position:
               chr10:15486011-15485674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               148, 31
               

               Conread position:
               13-332
               

               Cow position:
               chr10:46664556-46664228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               146, 20
               

               Conread position:
               13-352
               

               Cow position:
               chr10:29795158-29794808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               145, 20
               

               Conread position:
               15-299
               

               Cow position:
               chr10:26692497-26692202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 19
               

               Conread position:
               28-313
               

               Cow position:
               chr10:53684107-53683808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               29-299
               

               Cow position:
               chr10:924181-924454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               127, 213
               

               Conread position:
               29-304
               

               Cow position:
               chr10:11108073-11108344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               39-173
               

               Cow position:
               chr10:36897434-36897298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               39-254
               

               Cow position:
               chr10:20568616-20568393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               39-321
               

               Cow position:
               chr10:8843452-8843157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               84, 198
               

               Conread position:
               39-332
               

               Cow position:
               chr10:55641232-55640928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               113, 18
               

               Conread position:
               39-346
               

               Cow position:
               chr10:36582798-36583124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 98
               

               Conread position:
               41-319
               

               Cow position:
               chr10:53210736-53211024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               131, 57
               

               Conread position:
               43-323
               

               Cow position:
               chr10:21937270-21936984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 85
               

               Conread position:
               44-326
               

               Cow position:
               chr10:26588768-26588472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               45-350
               

               Cow position:
               chr10:57744103-57743796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 127
               

               Conread position:
               56-232
               

               Cow position:
               chr10:5442456-5442636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               102, 79
               

               Conread position:
               60-326
               

               Cow position:
               chr10:25071664-25071940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               61-322
               

               Cow position:
               chr10:22979892-22980162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 179
               

               Conread position:
               82-332
               

               Cow position:
               chr10:6012448-6012710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-319
               

               Cow position:
               chr10:4502204-4501957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-243
               

               Cow position:
               chr11:11318987-11319225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               172, 11
               

               Conread position:
               4-164
               

               Cow position:
               chr11:56106512-56106669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               114, 11
               

               Conread position:
               5-271
               

               Cow position:
               chr11:77437108-77436841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               8-304
               

               Cow position:
               chr11:9960061-9960354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               8-355
               

               Cow position:
               chr11:52248469-52248120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               13-273
               

               Cow position:
               chr11:15437623-15437363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               13-278
               

               Cow position:
               chr11:35630343-35630069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               15-294
               

               Cow position:
               chr11:80287025-80287315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               24-249
               

               Cow position:
               chr11:55423306-55423076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               29-341
               

               Cow position:
               chr11:35240704-35240375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               39-323
               

               Cow position:
               chr11:78680578-78680285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 188
               

               Conread position:
               39-330
               

               Cow position:
               chr11:66605477-66605782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               119, 137
               

               Conread position:
               39-332
               

               Cow position:
               chr11:10758165-10758464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               119, 12
               

               Conread position:
               40-179
               

               Cow position:
               chr11:11378872-11378737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               40-412
               

               Cow position:
               chr11:50178196-50178577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               47-355
               

               Cow position:
               chr11:39432917-39432601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               112, 31
               

               Conread position:
               55-214
               

               Cow position:
               chr11:54095124-54094958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               60-323
               

               Cow position:
               chr11:61313267-61313547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               77, 29
               

               Conread position:
               61-332
               

               Cow position:
               chr11:58817138-58816856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               98, 82
               

               Conread position:
               5-278
               

               Cow position:
               chr12:4636645-4636919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               138, 9
               

               Conread position:
               5-321
               

               Cow position:
               chr12:25940322-25940647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               170, 9
               

               Conread position:
               5-326
               

               Cow position:
               chr12:39416683-39416364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               159, 9
               

               Conread position:
               13-332
               

               Cow position:
               chr12:3716391-3716729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               61-332
               

               Cow position:
               chr12:14523238-14522947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               67-333
               

               Cow position:
               chr12:32056204-32055930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               106, 84
               

               Conread position:
               1-326
               

               Cow position:
               chr13:41361104-41361445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               2-332
               

               Cow position:
               chr13:3015856-3015517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               5-179
               

               Cow position:
               chr13:47850617-47850788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               155, 9
               

               Conread position:
               5-263
               

               Cow position:
               chr13:44991689-44991948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               8-309
               

               Cow position:
               chr13:42717654-42717354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               173, 7
               

               Conread position:
               13-273
               

               Cow position:
               chr13:23266162-23266429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               29-268
               

               Cow position:
               chr13:5925502-5925261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               130, 54
               

               Conread position:
               29-269
               

               Cow position:
               chr13:44634803-44635050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               146, 22
               

               Conread position:
               29-306
               

               Cow position:
               chr13:17378319-17378035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 31
               

               Conread position:
               29-323
               

               Cow position:
               chr13:32183155-32182861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               30-215
               

               Cow position:
               chr13:20511890-20511706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               155, 55
               

               Conread position:
               43-232
               

               Cow position:
               chr13:53856899-53857090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               43-306
               

               Cow position:
               chr13:17048615-17048883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               96, 85
               

               Conread position:
               53-254
               

               Cow position:
               chr13:4519403-4519608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 141
               

               Conread position:
               60-323
               

               Cow position:
               chr13:46465589-46465872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 82
               

               Conread position:
               61-330
               

               Cow position:
               chr13:43974331-43974620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               61-332
               

               Cow position:
               chr13:15280915-15280624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               76, 85
               

               Conread position:
               62-302
               

               Cow position:
               chr13:3800023-3799768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 161
               

               Conread position:
               63-299
               

               Cow position:
               chr13:41398406-41398162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               1-323
               

               Cow position:
               chr14:3437641-3437971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               5-158
               

               Cow position:
               chr14:18531605-18531456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               5-269
               

               Cow position:
               chr14:10485369-10485103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               154, 9
               

               Conread position:
               5-332
               

               Cow position:
               chr14:37179820-37180167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               154, 29
               

               Conread position:
               8-254
               

               Cow position:
               chr14:24837353-24837101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               151, 6
               

               Conread position:
               8-290
               

               Cow position:
               chr14:37353089-37353375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               149, 6
               

               Conread position:
               8-323
               

               Cow position:
               chr14:20468846-20468538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               151, 6
               

               Conread position:
               14-254
               

               Cow position:
               chr14:34355105-34354860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               145, 40
               

               Conread position:
               15-225
               

               Cow position:
               chr14:26287479-26287268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               143, 22
               

               Conread position:
               16-275
               

               Cow position:
               chr14:27208233-27208497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               143, 15
               

               Conread position:
               29-273
               

               Cow position:
               chr14:40880257-40880002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               29-350
               

               Cow position:
               chr14:27822536-27822870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               131, 170
               

               Conread position:
               39-273
               

               Cow position:
               chr14:49480168-49479929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               119, 76
               

               Conread position:
               39-322
               

               Cow position:
               chr14:39505202-39505501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               60-323
               

               Cow position:
               chr14:36109342-36109622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               60-332
               

               Cow position:
               chr14:5491802-5492094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               60-332
               

               Cow position:
               chr14:8884396-8884680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               1-272
               

               Cow position:
               chr15:22564760-22565034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               1-290
               

               Cow position:
               chr15:10839513-10839219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               1-323
               

               Cow position:
               chr15:42102411-42102065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               5-261
               

               Cow position:
               chr15:38906060-38905803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               5-320
               

               Cow position:
               chr15:19655561-19655240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               154, 9
               

               Conread position:
               5-323
               

               Cow position:
               chr15:24639571-24639247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               147, 11
               

               Conread position:
               5-355
               

               Cow position:
               chr15:9369162-9368799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               12-257
               

               Cow position:
               chr15:34056988-34057242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               18, 228
               

               Conread position:
               13-173
               

               Cow position:
               chr15:9038369-9038525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               145, 26
               

               Conread position:
               13-234
               

               Cow position:
               chr15:22619836-22619616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               147, 19
               

               Conread position:
               13-269
               

               Cow position:
               chr15:48026537-48026284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               165, 23
               

               Conread position:
               13-323
               

               Cow position:
               chr15:34102323-34102642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               14-254
               

               Cow position:
               chr15:16583281-16583037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               16-261
               

               Cow position:
               chr15:24874838-24875087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               142, 20
               

               Conread position:
               29-276
               

               Cow position:
               chr15:15173106-15172847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               39-273
               

               Cow position:
               chr15:47342460-47342705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               81, 103
               

               Conread position:
               60-229
               

               Cow position:
               chr15:22561464-22561291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 10
               

               Conread position:
               60-321
               

               Cow position:
               chr15:5913092-5913373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               61-307
               

               Cow position:
               chr15:27711614-27711879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr16:21318752-21318581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               156, 13
               

               Conread position:
               5-320
               

               Cow position:
               chr16:16286212-16285886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               153, 10
               

               Conread position:
               5-322
               

               Cow position:
               chr16:20722341-20722026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               155, 9
               

               Conread position:
               5-355
               

               Cow position:
               chr16:34209553-34209192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               155, 9
               

               Conread position:
               8-225
               

               Cow position:
               chr16:13601419-13601638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               8-290
               

               Cow position:
               chr16:39760709-39760425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 6
               

               Conread position:
               8-322
               

               Cow position:
               chr16:31827174-31826866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               266, 7
               

               Conread position:
               11-229
               

               Cow position:
               chr16:24390551-24390330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               148, 21
               

               Conread position:
               13-179
               

               Cow position:
               chr16:27589316-27589478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               146, 24
               

               Conread position:
               13-243
               

               Cow position:
               chr16:55748125-55748357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               144, 17
               

               Conread position:
               13-253
               

               Cow position:
               chr16:47918886-47918648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               145, 25
               

               Conread position:
               15-328
               

               Cow position:
               chr16:53214740-53214404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               16-309
               

               Cow position:
               chr16:38290439-38290747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               143, 17
               

               Conread position:
               29-245
               

               Cow position:
               chr16:31389192-31389410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               129, 32
               

               Conread position:
               30-323
               

               Cow position:
               chr16:40284581-40284267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               128, 100
               

               Conread position:
               39-355
               

               Cow position:
               chr16:4018483-4018812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               136, 159
               

               Conread position:
               43-309
               

               Cow position:
               chr16:44436046-44435770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               61-332
               

               Cow position:
               chr16:23532848-23533138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               74-328
               

               Cow position:
               chr16:1652461-1652197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               2-182
               

               Cow position:
               chr17:29109799-29109973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               157, 12
               

               Conread position:
               5-294
               

               Cow position:
               chr17:26344132-26344417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               154, 9
               

               Conread position:
               8-323
               

               Cow position:
               chr17:28359537-28359208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               120, 6
               

               Conread position:
               8-332
               

               Cow position:
               chr17:31948785-31949124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               169, 28
               

               Conread position:
               11-323
               

               Cow position:
               chr17:18814908-18814578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               12-251
               

               Cow position:
               chr17:7802105-7802348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               146, 25
               

               Conread position:
               13-326
               

               Cow position:
               chr17:2143060-2142731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               29-229
               

               Cow position:
               chr17:19706299-19706096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               32-251
               

               Cow position:
               chr17:3490482-3490253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               41-269
               

               Cow position:
               chr17:35521342-35521578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               117, 19
               

               Conread position:
               42-324
               

               Cow position:
               chr17:35547609-35547899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               109, 240
               

               Conread position:
               4-228
               

               Cow position:
               chr18:158637-158863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               157, 11
               

               Conread position:
               5-179
               

               Cow position:
               chr18:41250030-41249861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               153, 10
               

               Conread position:
               5-348
               

               Cow position:
               chr18:37200169-37200517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               140, 13
               

               Conread position:
               8-232
               

               Cow position:
               chr18:28189195-28189418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               150, 7
               

               Conread position:
               8-273
               

               Cow position:
               chr18:19272006-19271745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               152, 6
               

               Conread position:
               8-348
               

               Cow position:
               chr18:1658604-1658946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               167, 7
               

               Conread position:
               16-323
               

               Cow position:
               chr18:36347117-36346794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               32-323
               

               Cow position:
               chr18:7085510-7085203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               126, 210
               

               Conread position:
               43-254
               

               Cow position:
               chr18:21304457-21304236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               116, 79
               

               Conread position:
               55-254
               

               Cow position:
               chr18:16232959-16233158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 133
               

               Conread position:
               60-254
               

               Cow position:
               chr18:15485013-15485216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 81
               

               Conread position:
               61-328
               

               Cow position:
               chr18:3892203-3892488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               59, 177
               

               Conread position:
               67-323
               

               Cow position:
               chr18:10101035-10100760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               93, 46
               

               Conread position:
               1-225
               

               Cow position:
               chr19:28938122-28938352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               158, 15
               

               Conread position:
               1-229
               

               Cow position:
               chr19:33441335-33441564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               150, 14
               

               Conread position:
               5-251
               

               Cow position:
               chr19:29341298-29341053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               5-285
               

               Cow position:
               chr19:18719329-18719046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               13-253
               

               Cow position:
               chr19:14627693-14627459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               145, 20
               

               Conread position:
               13-273
               

               Cow position:
               chr19:21287255-21287519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               146, 20
               

               Conread position:
               13-273
               

               Cow position:
               chr19:34330804-34330536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               13-369
               

               Cow position:
               chr19:40050680-40051038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               145, 18
               

               Conread position:
               16-309
               

               Cow position:
               chr19:18448927-18448625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               169, 13
               

               Conread position:
               29-173
               

               Cow position:
               chr19:17690799-17690656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               29-333
               

               Cow position:
               chr19:39884090-39884416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               38-305
               

               Cow position:
               chr19:10206934-10206654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               39-173
               

               Cow position:
               chr19:17804840-17804705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               39-254
               

               Cow position:
               chr19:42255129-42255348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               40-299
               

               Cow position:
               chr19:33350581-33350852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               61-332
               

               Cow position:
               chr19:5733433-5733146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               62-323
               

               Cow position:
               chr19:28912462-28912191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               4-345
               

               Cow position:
               chr2:22103525-22103883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               134, 11
               

               Conread position:
               5-273
               

               Cow position:
               chr2:39975883-39975611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               173, 10
               

               Conread position:
               8-254
               

               Cow position:
               chr2:469310-469057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               10-328
               

               Cow position:
               chr2:69294519-69294198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               148, 27
               

               Conread position:
               14-305
               

               Cow position:
               chr2:16822394-16822096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               144, 23
               

               Conread position:
               15-228
               

               Cow position:
               chr2:42205737-42205952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               16-181
               

               Cow position:
               chr2:30588070-30587909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               142, 17
               

               Conread position:
               29-329
               

               Cow position:
               chr2:21652348-21652650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               130, 31
               

               Conread position:
               34-323
               

               Cow position:
               chr2:42692184-42691887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 105
               

               Conread position:
               39-323
               

               Cow position:
               chr2:64221785-64222086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 11
               

               Conread position:
               40-328
               

               Cow position:
               chr2:29757011-29757313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 107
               

               Conread position:
               41-355
               

               Cow position:
               chr2:33183356-33183024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               60-323
               

               Cow position:
               chr2:30389002-30388719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               60-326
               

               Cow position:
               chr2:64765533-64765815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               61-292
               

               Cow position:
               chr2:1734656-1734895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               80, 137
               

               Conread position:
               61-328
               

               Cow position:
               chr2:4700093-4699811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 53
               

               Conread position:
               62-350
               

               Cow position:
               chr2:33464710-33465006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               97, 220
               

               Conread position:
               5-173
               

               Cow position:
               chr20:5676185-5676021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               5-179
               

               Cow position:
               chr20:8926283-8926453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               5-323
               

               Cow position:
               chr20:12791863-12791551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               232, 9
               

               Conread position:
               8-323
               

               Cow position:
               chr20:6598830-6599154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               150, 21
               

               Conread position:
               8-344
               

               Cow position:
               chr20:4735309-4735649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               16-323
               

               Cow position:
               chr20:27063702-27063381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 13
               

               Conread position:
               26-179
               

               Cow position:
               chr20:23097919-23097765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               29-214
               

               Cow position:
               chr20:24508900-24508715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               39-333
               

               Cow position:
               chr20:14032346-14032647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               118, 167
               

               Conread position:
               54-333
               

               Cow position:
               chr20:34486569-34486269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               60-277
               

               Cow position:
               chr20:16957151-16957376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               29, 179
               

               Conread position:
               60-332
               

               Cow position:
               chr20:27565680-27565399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               61-332
               

               Cow position:
               chr20:13766787-13766496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               61-332
               

               Cow position:
               chr20:30689776-30689486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               67-321
               

               Cow position:
               chr20:10913677-10913952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               1-229
               

               Cow position:
               chr21:47823533-47823762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               5-247
               

               Cow position:
               chr21:9968113-9968355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               5-323
               

               Cow position:
               chr21:4940226-4939899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               5-323
               

               Cow position:
               chr21:39385458-39385786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               130, 9
               

               Conread position:
               8-158
               

               Cow position:
               chr21:1177709-1177848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               12-237
               

               Cow position:
               chr21:19623133-19622901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               21, 194
               

               Conread position:
               13-266
               

               Cow position:
               chr21:15933407-15933149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               144, 29
               

               Conread position:
               29-273
               

               Cow position:
               chr21:28500675-28500420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               29-306
               

               Cow position:
               chr21:40617905-40618203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               40-280
               

               Cow position:
               chr21:28173552-28173801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               118, 109
               

               Conread position:
               42-323
               

               Cow position:
               chr21:446761-446465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               44-232
               

               Cow position:
               chr21:29975896-29976092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               60-328
               

               Cow position:
               chr21:4732531-4732816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               60-332
               

               Cow position:
               chr21:24698163-24697881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 246
               

               Conread position:
               62-323
               

               Cow position:
               chr21:5593314-5593589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               95, 171
               

               Conread position:
               1-294
               

               Cow position:
               chr22:12691061-12691356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               5-304
               

               Cow position:
               chr22:32223595-32223302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               170, 9
               

               Conread position:
               8-273
               

               Cow position:
               chr22:25796604-25796880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 6
               

               Conread position:
               8-278
               

               Cow position:
               chr22:7288131-7287862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               150, 7
               

               Conread position:
               13-311
               

               Cow position:
               chr22:23618630-23618935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               13-323
               

               Cow position:
               chr22:34016816-34017142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               146, 21
               

               Conread position:
               15-323
               

               Cow position:
               chr22:18218342-18218655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               21-273
               

               Cow position:
               chr22:23206766-23207020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               39-323
               

               Cow position:
               chr22:42722701-42722993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 192
               

               Conread position:
               39-352
               

               Cow position:
               chr22:37996457-37996775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               119, 45
               

               Conread position:
               60-324
               

               Cow position:
               chr22:23581970-23582236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               99, 189
               

               Conread position:
               61-332
               

               Cow position:
               chr22:19139866-19140155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-304
               

               Cow position:
               chr23:6698727-6698412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               5-243
               

               Cow position:
               chr23:6688174-6688399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               14-245
               

               Cow position:
               chr23:28743578-28743345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               14-333
               

               Cow position:
               chr23:30837712-30838029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 23
               

               Conread position:
               29-184
               

               Cow position:
               chr23:14943300-14943143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               131, 32
               

               Conread position:
               30-273
               

               Cow position:
               chr23:16654783-16654529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               30-337
               

               Cow position:
               chr23:11399753-11399426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               31-254
               

               Cow position:
               chr23:15866048-15866275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               127, 86
               

               Conread position:
               39-309
               

               Cow position:
               chr23:14268143-14267859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               40-273
               

               Cow position:
               chr23:11023134-11023371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               63-229
               

               Cow position:
               chr23:17248118-17247951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               81-332
               

               Cow position:
               chr23:20152405-20152676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-323
               

               Cow position:
               chr24:19782763-19782432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               5-297
               

               Cow position:
               chr24:16564277-16563974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               147, 9
               

               Conread position:
               8-215
               

               Cow position:
               chr24:34197461-34197252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               143, 6
               

               Conread position:
               8-351
               

               Cow position:
               chr24:15344748-15344415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               77, 6
               

               Conread position:
               13-218
               

               Cow position:
               chr24:37434257-37434465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               116, 23
               

               Conread position:
               13-325
               

               Cow position:
               chr24:29071446-29071775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               29-238
               

               Cow position:
               chr24:6237168-6236960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               129, 49
               

               Conread position:
               30-335
               

               Cow position:
               chr24:6501698-6502017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               39-245
               

               Cow position:
               chr24:5885125-5885339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               43-172
               

               Cow position:
               chr24:43658980-43658851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               113, 63
               

               Conread position:
               61-254
               

               Cow position:
               chr24:41333293-41333496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               61-276
               

               Cow position:
               chr24:6416089-6415864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 75
               

               Conread position:
               1-303
               

               Cow position:
               chr25:30666081-30666385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               177, 7
               

               Conread position:
               4-179
               

               Cow position:
               chr25:5154813-5154984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               155, 10
               

               Conread position:
               4-229
               

               Cow position:
               chr25:4000777-4000550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               155, 10
               

               Conread position:
               4-231
               

               Cow position:
               chr25:352339-352106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               5-243
               

               Cow position:
               chr25:3753747-3753985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               8-276
               

               Cow position:
               chr25:15309676-15309405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               13-219
               

               Cow position:
               chr25:35330853-35331061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               145, 7
               

               Conread position:
               13-323
               

               Cow position:
               chr25:22935724-22935414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               147, 24
               

               Conread position:
               14-157
               

               Cow position:
               chr25:12701849-12701711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               14-323
               

               Cow position:
               chr25:28230577-28230259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               109, 19
               

               Conread position:
               24-229
               

               Cow position:
               chr25:18169080-18168879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 27
               

               Conread position:
               29-179
               

               Cow position:
               chr25:15205824-15205672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               29-329
               

               Cow position:
               chr25:27815344-27815023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               36-273
               

               Cow position:
               chr25:19093977-19093731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               123, 117
               

               Conread position:
               1-173
               

               Cow position:
               chr26:9494068-9494236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               157, 14
               

               Conread position:
               1-254
               

               Cow position:
               chr26:31794466-31794213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               13-344
               

               Cow position:
               chr26:21691454-21691794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               14-176
               

               Cow position:
               chr26:15624392-15624552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               14-254
               

               Cow position:
               chr26:21659056-21658811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               15-176
               

               Cow position:
               chr26:17688421-17688579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               144, 18
               

               Conread position:
               29-232
               

               Cow position:
               chr26:21638909-21639117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               128, 11
               

               Conread position:
               40-284
               

               Cow position:
               chr26:20248278-20248032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 187
               

               Conread position:
               61-328
               

               Cow position:
               chr26:23520344-23520061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 6
               

               Conread position:
               65-320
               

               Cow position:
               chr26:7603373-7603648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-332
               

               Cow position:
               chr27:12549395-12549735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               15-270
               

               Cow position:
               chr27:17049568-17049830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               29-290
               

               Cow position:
               chr27:16117297-16117568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               88-273
               

               Cow position:
               chr27:17438980-17439177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               4-348
               

               Cow position:
               chr28:22645179-22644830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               152, 10
               

               Conread position:
               5-360
               

               Cow position:
               chr28:5175189-5175551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               144, 9
               

               Conread position:
               20-273
               

               Cow position:
               chr28:32633511-32633774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               31-322
               

               Cow position:
               chr28:1150097-1149803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               197, 30
               

               Conread position:
               60-345
               

               Cow position:
               chr28:16684506-16684209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 247
               

               Conread position:
               61-332
               

               Cow position:
               chr28:29035769-29036060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               5-179
               

               Cow position:
               chr29:29298640-29298470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               5-326
               

               Cow position:
               chr29:34957224-34956915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               9-254
               

               Cow position:
               chr29:21535022-21535275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               29-254
               

               Cow position:
               chr29:26458200-26458433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               39-423
               

               Cow position:
               chr29:24266132-24265730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 102
               

               Conread position:
               40-346
               

               Cow position:
               chr29:39372535-39372216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 188
               

               Conread position:
               62-290
               

               Cow position:
               chr29:17154099-17153861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               97, 15
               

               Conread position:
               62-300
               

               Cow position:
               chr29:14853761-14854010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               62-323
               

               Cow position:
               chr29:4201738-4201467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               97, 231
               

               Conread position:
               92-333
               

               Cow position:
               chr29:13923900-13923639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr3:25062477-25062300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               1-229
               

               Cow position:
               chr3:43426417-43426189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               155, 13
               

               Conread position:
               1-278
               

               Cow position:
               chr3:52514269-52513990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               111, 13
               

               Conread position:
               5-321
               

               Cow position:
               chr3:64404123-64404445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               5-323
               

               Cow position:
               chr3:77296253-77295939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 9
               

               Conread position:
               7-320
               

               Cow position:
               chr3:200521-200198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               172, 7
               

               Conread position:
               8-278
               

               Cow position:
               chr3:1264279-1264011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               151, 7
               

               Conread position:
               8-294
               

               Cow position:
               chr3:22947855-22948139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               8-344
               

               Cow position:
               chr3:56914687-56914345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               152, 6
               

               Conread position:
               11-329
               

               Cow position:
               chr3:70519490-70519822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               69, 26
               

               Conread position:
               13-273
               

               Cow position:
               chr3:51478513-51478242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               13-328
               

               Cow position:
               chr3:14717450-14717122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               146, 15
               

               Conread position:
               13-332
               

               Cow position:
               chr3:62911061-62911394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               13-332
               

               Cow position:
               chr3:73686760-73687098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 104
               

               Conread position:
               29-179
               

               Cow position:
               chr3:45274493-45274647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               30-179
               

               Cow position:
               chr3:24677962-24678112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               32-354
               

               Cow position:
               chr3:38324101-38324442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               149, 119
               

               Conread position:
               39-276
               

               Cow position:
               chr3:22174062-22173816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               138, 71
               

               Conread position:
               39-328
               

               Cow position:
               chr3:56154057-56153765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               195, 22
               

               Conread position:
               40-257
               

               Cow position:
               chr3:15723173-15722941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               42-348
               

               Cow position:
               chr3:77369713-77370026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 88
               

               Conread position:
               60-261
               

               Cow position:
               chr3:15685307-15685513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               61-326
               

               Cow position:
               chr3:73936436-73936720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               61-332
               

               Cow position:
               chr3:42847110-42846819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               64-352
               

               Cow position:
               chr3:4080265-4080559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               94, 79
               

               Conread position:
               68-328
               

               Cow position:
               chr3:78546509-78546789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               5-333
               

               Cow position:
               chr4:61128602-61128940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               10-251
               

               Cow position:
               chr4:5134432-5134199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               148, 20
               

               Conread position:
               13-294
               

               Cow position:
               chr4:40576254-40576542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               13-346
               

               Cow position:
               chr4:57206219-57205875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               168, 21
               

               Conread position:
               15-257
               

               Cow position:
               chr4:52253113-52252867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               143, 21
               

               Conread position:
               15-309
               

               Cow position:
               chr4:44577037-44577345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               28-229
               

               Cow position:
               chr4:33442948-33443154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               130, 89
               

               Conread position:
               30-272
               

               Cow position:
               chr4:33196546-33196797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               128, 56
               

               Conread position:
               39-323
               

               Cow position:
               chr4:23888608-23888912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               41-221
               

               Cow position:
               chr4:36818267-36818453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 112
               

               Conread position:
               41-273
               

               Cow position:
               chr4:46031974-46031734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               112, 73
               

               Conread position:
               53-226
               

               Cow position:
               chr4:16246397-16246573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               55-332
               

               Cow position:
               chr4:31174876-31174581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               60-309
               

               Cow position:
               chr4:27185963-27186225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               99, 150
               

               Conread position:
               61-332
               

               Cow position:
               chr4:43895928-43896216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               62-332
               

               Cow position:
               chr4:43884656-43884374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-332
               

               Cow position:
               chr5:35262171-35261827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               4-155
               

               Cow position:
               chr5:18479122-18478977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               5-325
               

               Cow position:
               chr5:32260768-32261100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               13-247
               

               Cow position:
               chr5:51877027-51876788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               13-251
               

               Cow position:
               chr5:33175749-33175514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               146, 13
               

               Conread position:
               15-323
               

               Cow position:
               chr5:16959769-16960060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               29-332
               

               Cow position:
               chr5:23351759-23351447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               106, 113
               

               Conread position:
               29-345
               

               Cow position:
               chr5:37714916-37715253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               128, 27
               

               Conread position:
               30-357
               

               Cow position:
               chr5:43031871-43031546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               32-328
               

               Cow position:
               chr5:53405887-53406202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               39-254
               

               Cow position:
               chr5:35967870-35967648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               61-330
               

               Cow position:
               chr5:62427912-62427621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               61-333
               

               Cow position:
               chr5:2918127-2917838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 266
               

               Conread position:
               61-421
               

               Cow position:
               chr5:27201191-27201570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               40, 303
               

               Conread position:
               5-326
               

               Cow position:
               chr6:7755096-7755425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               8-179
               

               Cow position:
               chr6:16276590-16276423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 6
               

               Conread position:
               8-323
               

               Cow position:
               chr6:50527362-50527040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               138, 6
               

               Conread position:
               14-353
               

               Cow position:
               chr6:2052711-2053048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               15-254
               

               Cow position:
               chr6:42131124-42131369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               144, 39
               

               Conread position:
               29-323
               

               Cow position:
               chr6:15783148-15783460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               34-356
               

               Cow position:
               chr6:56635628-56635959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               139, 95
               

               Conread position:
               37-232
               

               Cow position:
               chr6:6049825-6049619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               61-254
               

               Cow position:
               chr6:12387665-12387868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               1-254
               

               Cow position:
               chr7:15559028-15558769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               157, 13
               

               Conread position:
               5-217
               

               Cow position:
               chr7:24224722-24224507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               154, 9
               

               Conread position:
               5-257
               

               Cow position:
               chr7:58656780-58656520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 9
               

               Conread position:
               8-326
               

               Cow position:
               chr7:20225124-20225459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               151, 6
               

               Conread position:
               15-273
               

               Cow position:
               chr7:31638471-31638211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               143, 22
               

               Conread position:
               29-352
               

               Cow position:
               chr7:55810835-55810503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               129, 22
               

               Conread position:
               39-173
               

               Cow position:
               chr7:40806-40672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               117, 50
               

               Conread position:
               39-176
               

               Cow position:
               chr7:57820973-57821110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 131
               

               Conread position:
               39-254
               

               Cow position:
               chr7:28880234-28880008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               40-279
               

               Cow position:
               chr7:22191203-22190957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               124, 97
               

               Conread position:
               41-343
               

               Cow position:
               chr7:30023880-30024200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               77, 318
               

               Conread position:
               42-298
               

               Cow position:
               chr7:22180633-22180886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               60-326
               

               Cow position:
               chr7:60574685-60574407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               99, 177
               

               Conread position:
               60-352
               

               Cow position:
               chr7:34489810-34489497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               62-323
               

               Cow position:
               chr7:30715581-30715844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               97, 79
               

               Conread position:
               62-341
               

               Cow position:
               chr7:268652-268356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 67
               

               Conread position:
               84-273
               

               Cow position:
               chr7:46163313-46163119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 9
               

               Conread position:
               1-181
               

               Cow position:
               chr8:10790915-10791095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               2-231
               

               Cow position:
               chr8:20006160-20006380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               156, 13
               

               Conread position:
               5-226
               

               Cow position:
               chr8:29301942-29302161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               145, 9
               

               Conread position:
               5-228
               

               Cow position:
               chr8:25496014-25496233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               170, 9
               

               Conread position:
               5-299
               

               Cow position:
               chr8:43016816-43017102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               8-323
               

               Cow position:
               chr8:28335895-28336204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               143, 25
               

               Conread position:
               10-176
               

               Cow position:
               chr8:39577025-39576862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               149, 24
               

               Conread position:
               13-176
               

               Cow position:
               chr8:13214402-13214560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               142, 20
               

               Conread position:
               13-179
               

               Cow position:
               chr8:8638138-8638299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               13-229
               

               Cow position:
               chr8:52619637-52619857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               146, 27
               

               Conread position:
               13-255
               

               Cow position:
               chr8:5235501-5235746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               146, 19
               

               Conread position:
               13-273
               

               Cow position:
               chr8:21121402-21121658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               162, 24
               

               Conread position:
               16-348
               

               Cow position:
               chr8:6468155-6468504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               29-260
               

               Cow position:
               chr8:37240662-37240419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               130, 65
               

               Conread position:
               30-229
               

               Cow position:
               chr8:36855983-36856185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 73
               

               Conread position:
               39-241
               

               Cow position:
               chr8:61613599-61613806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 32
               

               Conread position:
               39-332
               

               Cow position:
               chr8:31262333-31262033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 121
               

               Conread position:
               39-355
               

               Cow position:
               chr8:5389948-5390270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 279
               

               Conread position:
               54-309
               

               Cow position:
               chr8:29038967-29038697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               60-323
               

               Cow position:
               chr8:26039695-26039418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               61-240
               

               Cow position:
               chr8:53989530-53989717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               61-332
               

               Cow position:
               chr8:25672375-25672086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               63-329
               

               Cow position:
               chr8:28982418-28982689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               109-339
               

               Cow position:
               chr8:34483256-34483501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 230
               

               Conread position:
               1-323
               

               Cow position:
               chr9:32293972-32293653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               2-229
               

               Cow position:
               chr9:23852011-23851779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               4-218
               

               Cow position:
               chr9:5880322-5880103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               154, 10
               

               Conread position:
               5-346
               

               Cow position:
               chr9:42930792-42931136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               155, 9
               

               Conread position:
               8-262
               

               Cow position:
               chr9:13115701-13115961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               8-329
               

               Cow position:
               chr9:56562532-56562207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               152, 8
               

               Conread position:
               13-323
               

               Cow position:
               chr9:58251916-58252249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               43, 119
               

               Conread position:
               15-254
               

               Cow position:
               chr9:32582533-32582292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               162, 22
               

               Conread position:
               15-323
               

               Cow position:
               chr9:46237474-46237796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               142, 17
               

               Conread position:
               28-353
               

               Cow position:
               chr9:29008556-29008903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 291
               

               Conread position:
               31-345
               

               Cow position:
               chr9:39430865-39430543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               144, 208
               

               Conread position:
               39-283
               

               Cow position:
               chr9:34956100-34956352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               119, 31
               

               Conread position:
               45-305
               

               Cow position:
               chr9:29237230-29237505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               113, 175
               

               Conread position:
               53-306
               

               Cow position:
               chr9:55264434-55264162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               105, 29
               

               Conread position:
               60-332
               

               Cow position:
               chr9:12259515-12259801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 174
               

               Conread position:
               60-332
               

               Cow position:
               chr9:47882545-47882837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               67-254
               

               Cow position:
               chr9:59507487-59507681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               1-254
               

               Cow position:
               chrX:39546276-39546536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               145, 13
               

               Conread position:
               1-332
               

               Cow position:
               chrX:389205-388864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               4-229
               

               Cow position:
               chrX:24006128-24006351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               155, 8
               

               Conread position:
               5-273
               

               Cow position:
               chrX:19556703-19556442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               5-298
               

               Cow position:
               chrX:21973636-21973335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               170, 9
               

               Conread position:
               5-301
               

               Cow position:
               chrX:39294849-39294542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               176, 9
               

               Conread position:
               5-323
               

               Cow position:
               chrX:39383385-39383715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               5-341
               

               Cow position:
               chrX:33172265-33172612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               5-343
               

               Cow position:
               chrX:41114896-41114550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               153, 9
               

               Conread position:
               5-345
               

               Cow position:
               chrX:32002725-32003082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               8-216
               

               Cow position:
               chrX:40322608-40322407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               149, 6
               

               Conread position:
               8-329
               

               Cow position:
               chrX:37960300-37959963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               11-254
               

               Cow position:
               chrX:40517280-40517033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               147, 20
               

               Conread position:
               13-252
               

               Cow position:
               chrX:19228387-19228623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               13-319
               

               Cow position:
               chrX:33003942-33003619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               148, 24
               

               Conread position:
               13-323
               

               Cow position:
               chrX:20970610-20970282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               145, 24
               

               Conread position:
               13-383
               

               Cow position:
               chrX:20801463-20801078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               146, 41
               

               Conread position:
               15-322
               

               Cow position:
               chrX:19031113-19030798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               15-336
               

               Cow position:
               chrX:29364649-29364347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               29-254
               

               Cow position:
               chrX:12750650-12750419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               130, 124
               

               Conread position:
               30-218
               

               Cow position:
               chrX:18691467-18691662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               36-273
               

               Cow position:
               chrX:22797912-22797670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               39-229
               

               Cow position:
               chrX:18684448-18684252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               119, 17
               

               Conread position:
               39-257
               

               Cow position:
               chrX:27534506-27534733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 84
               

               Conread position:
               39-320
               

               Cow position:
               chrX:31981958-31982258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               39-332
               

               Cow position:
               chrX:3952520-3952208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               119, 166
               

               Conread position:
               39-332
               

               Cow position:
               chrX:22102101-22102417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               40-323
               

               Cow position:
               chrX:18769565-18769275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 103
               

               Conread position:
               43-326
               

               Cow position:
               chrX:4630034-4630336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               45-323
               

               Cow position:
               chrX:41106349-41106643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 196
               

               Conread position:
               46-323
               

               Cow position:
               chrX:37955559-37955267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               53-243
               

               Cow position:
               chrX:21025383-21025578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               79, 173
               

               Conread position:
               60-323
               

               Cow position:
               chrX:488187-487903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               60-328
               

               Cow position:
               chrX:35288303-35288020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 147
               

               Conread position:
               61-229
               

               Cow position:
               chrX:38999543-38999376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               61-254
               

               Cow position:
               chrX:16514599-16514803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               61-323
               

               Cow position:
               chrX:11674702-11674422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               61-328
               

               Cow position:
               chrX:1342621-1342907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               61-328
               

               Cow position:
               chrX:42540246-42539960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               61-332
               

               Cow position:
               chrX:18898003-18898292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               62-332
               

               Cow position:
               chrX:40542313-40542028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               62-332
               

               Cow position:
               chrX:42380194-42380485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               89-354
               

               Cow position:
               chrX:24020506-24020775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 146
               

               Conread position:
               113-348
               

               Cow position:
               chrX:27647002-27646751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               62, 234
Conread position:	1-273
Cow position:	chr1:28492075-28492339 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	187
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	156, 13
Conread position:	1-323
Cow position:	chr1:61221368-61221035 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	214
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	43, 13
Conread position:	1-328
Cow position:	chr1:30672794-30672463 (view UCSC Genome Browser custom track)
Alignm length:	340
Alignm identity:	231
Alignm E-value:	5e-33
Alignm gaps (pig, cow):	89, 14
Conread position:	5-251
Cow position:	chr1:48266054-48265809 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	168
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	167, 9
Conread position:	5-273
Cow position:	chr1:37308943-37309218 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	192
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	112, 9
Conread position:	8-306
Cow position:	chr1:71020828-71021117 (view UCSC Genome Browser custom track)
Alignm length:	308
Alignm identity:	207
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	150, 6
Conread position:	8-323
Cow position:	chr1:37466289-37466608 (view UCSC Genome Browser custom track)
Alignm length:	327
Alignm identity:	221
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	69, 144
Conread position:	10-313
Cow position:	chr1:56080803-56081124 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	220
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	122, 20
Conread position:	11-492
Cow position:	chr1:66218732-66218242 (view UCSC Genome Browser custom track)
Alignm length:	503
Alignm identity:	379
Alignm E-value:	0
Alignm gaps (pig, cow):	170, 21
Conread position:	13-323
Cow position:	chr1:56643966-56644282 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	213
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	146, 15
Conread position:	13-343
Cow position:	chr1:37556354-37556009 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	233
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	36, 24
Conread position:	14-179
Cow position:	chr1:65059652-65059487 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	121
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	21, 72
Conread position:	14-323
Cow position:	chr1:41277236-41277560 (view UCSC Genome Browser custom track)
Alignm length:	329
Alignm identity:	217
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	145, 23
Conread position:	16-200
Cow position:	chr1:51848583-51848772 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	136
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	143, 135
Conread position:	29-323
Cow position:	chr1:35731895-35732211 (view UCSC Genome Browser custom track)
Alignm length:	317
Alignm identity:	207
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	130, 0
Conread position:	29-419
Cow position:	chr1:26053230-26053628 (view UCSC Genome Browser custom track)
Alignm length:	407
Alignm identity:	281
Alignm E-value:	0
Alignm gaps (pig, cow):	129, 29
Conread position:	39-290
Cow position:	chr1:51257500-51257243 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	173
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	139, 112
Conread position:	39-321
Cow position:	chr1:43221166-43221466 (view UCSC Genome Browser custom track)
Alignm length:	302
Alignm identity:	201
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	61, 48
Conread position:	39-323
Cow position:	chr1:73244382-73244088 (view UCSC Genome Browser custom track)
Alignm length:	296
Alignm identity:	192
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	28, 40
Conread position:	41-257
Cow position:	chr1:61702744-61702962 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	148
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	117, 25