Cow genome map
| Conread name: | Ss1.1-rski0120_d24.5 |
| Conread position: | 14-184 |
| Cow position: | chr19:33772617-33772787 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-184 |
| Cow position: | chr19:33900192-33900354 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-184 |
| Cow position: | chr19:33816409-33816570 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-187 |
| Cow position: | chr19:33913214-33913377 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-187 |
| Cow position: | chr19:33928772-33928932 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-193 |
| Cow position: | chr19:33831066-33831232 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-184 |
| Cow position: | chr19:33975616-33975772 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-345 |
| Cow position: | chr19:33816647-33816814 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-345 |
| Cow position: | chr19:33832418-33832581 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-345 |
| Cow position: | chr19:33900604-33900767 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-345 |
| Cow position: | chr19:33914003-33914166 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-345 |
| Cow position: | chr19:33931157-33931320 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-345 |
| Cow position: | chr19:33773664-33773803 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 344-469 |
| Cow position: | chr19:33914248-33914373 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-470 |
| Cow position: | chr19:33900849-33900975 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-471 |
| Cow position: | chr19:33832763-33832890 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-471 |
| Cow position: | chr19:33931404-33931531 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 118 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 449-690 |
| Cow position: | chr19:33902639-33902881 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 451-690 |
| Cow position: | chr19:33933264-33933501 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 457-685 |
| Cow position: | chr19:33774117-33774346 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 471-683 |
| Cow position: | chr19:33835696-33835908 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-689 |
| Cow position: | chr19:33915033-33915252 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 471-705 |
| Cow position: | chr19:33976994-33977229 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 756-1116 |
| Cow position: | chr19:33934778-33935148 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 302 |
| Conread position: | 16-184 |
| Cow position: | chr23:493745-493913 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-184 |
| Cow position: | chr23:321057-321217 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-184 |
| Cow position: | chr23:373207-373367 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-184 |
| Cow position: | chr23:442469-442629 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-184 |
| Cow position: | chr23:474034-474194 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-202 |
| Cow position: | chr23:329461-329639 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-248 |
| Cow position: | chr23:340593-340815 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 27-184 |
| Cow position: | chr23:434283-434440 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-184 |
| Cow position: | chr23:456232-456390 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 182-336 |
| Cow position: | chr23:322355-322509 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-336 |
| Cow position: | chr23:373515-373669 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 83 |
| Conread position: | 447-686 |
| Cow position: | chr23:373962-374200 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 451-686 |
| Cow position: | chr23:435254-435489 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 457-686 |
| Cow position: | chr23:341531-341761 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 458-686 |
| Cow position: | chr23:457037-457263 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 471-663 |
| Cow position: | chr23:562285-562477 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 471-663 |
| Cow position: | chr23:584690-584882 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 471-663 |
| Cow position: | chr23:602628-602820 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 471-663 |
| Cow position: | chr23:625268-625460 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 471-686 |
| Cow position: | chr23:323468-323683 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-686 |
| Cow position: | chr23:331428-331643 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 478-686 |
| Cow position: | chr23:475302-475510 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 105 |
| Conread position: | 479-672 |
| Cow position: | chr23:388456-388649 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 92 |
| Conread position: | 481-686 |
| Cow position: | chr23:443665-443870 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-186 |
| Cow position: | chr7:267486-267663 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 80 |