Cow genome map
| Conread name: | Ss1.1-rspc030_f24.5.5 |
| Conread position: | 1-226 |
| Cow position: | chr15:26781850-26781628 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 81 |
| Conread position: | 213-350 |
| Cow position: | chr15:26780292-26780154 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 131 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 349-416 |
| Cow position: | chr15:26779844-26779777 (view UCSC Genome Browser custom track) |
| Alignm length: | 68 |
| Alignm identity: | 68 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 415-557 |
| Cow position: | chr15:26779153-26779011 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-660 |
| Cow position: | chr15:26778521-26778418 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 655-792 |
| Cow position: | chr15:26777748-26777611 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 793-859 |
| Cow position: | chr15:26777525-26777459 (view UCSC Genome Browser custom track) |
| Alignm length: | 67 |
| Alignm identity: | 67 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 859-1011 |
| Cow position: | chr15:26776890-26776738 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1012-1122 |
| Cow position: | chr15:26776372-26776262 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 109 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1121-1207 |
| Cow position: | chr15:26776107-26776021 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1205-1306 |
| Cow position: | chr15:26775935-26775834 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1303-1449 |
| Cow position: | chr15:26775399-26775253 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1446-1609 |
| Cow position: | chr15:26775167-26775004 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1607-1722 |
| Cow position: | chr15:26774615-26774500 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 116 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1721-1848 |
| Cow position: | chr15:26773911-26773784 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 124 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1847-1954 |
| Cow position: | chr15:26773622-26773515 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1954-2170 |
| Cow position: | chr15:26773428-26773212 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2167-2428 |
| Cow position: | chr15:26773137-26772876 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2426-2633 |
| Cow position: | chr15:26772559-26772352 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2612-3638 |
| Cow position: | chr15:28462755-28461727 (view UCSC Genome Browser custom track) |
| Alignm length: | 1036 |
| Alignm identity: | 957 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 266 |
| Conread position: | 2632-2846 |
| Cow position: | chr15:26772196-26771982 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2844-2974 |
| Cow position: | chr15:26771903-26771773 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 128 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2962-3800 |
| Cow position: | chr15:26770840-26770001 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 830 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 3349-3810 |
| Cow position: | chr18:8940647-8940193 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 137 |
| Conread position: | 3399-3801 |
| Cow position: | chr18:28630347-28630721 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 28 |
| Conread position: | 3419-3578 |
| Cow position: | chr19:6857266-6857425 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3507-3700 |
| Cow position: | chr19:6857774-6857970 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 3623-3811 |
| Cow position: | chr19:15422666-15422479 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 3714-3804 |
| Cow position: | chr19:6858493-6858583 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3546-3694 |
| Cow position: | chr2:39754570-39754422 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3691-3805 |
| Cow position: | chr2:39754073-39753960 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3207-3814 |
| Cow position: | chr26:14090039-14090646 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |