Cow genome map
| Conread name: | Ss1.1-rspl24_a9.5 |
| Conread position: | 902-1078 |
| Cow position: | chr10:4246866-4246692 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 904-1075 |
| Cow position: | chr10:42858085-42857910 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 908-1065 |
| Cow position: | chr10:51993968-51994124 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 905-1049 |
| Cow position: | chr11:20756370-20756516 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 900-1086 |
| Cow position: | chr13:30485828-30485639 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 908-1092 |
| Cow position: | chr13:34707325-34707146 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 39 |
| Conread position: | 908-1084 |
| Cow position: | chr15:36784348-36784522 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 894-1092 |
| Cow position: | chr17:28108795-28108991 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 117, 8 |
| Conread position: | 893-1053 |
| Cow position: | chr18:37703264-37703425 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 909-1053 |
| Cow position: | chr19:17433361-17433504 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 892-1090 |
| Cow position: | chr2:13656019-13655816 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 902-1085 |
| Cow position: | chr2:18968396-18968212 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 912-1092 |
| Cow position: | chr2:5267447-5267264 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 904-1091 |
| Cow position: | chr20:24883759-24883565 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 906-1090 |
| Cow position: | chr20:19447053-19446867 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 1-1092 |
| Cow position: | chr22:14310887-14309782 (view UCSC Genome Browser custom track) |
| Alignm length: | 1125 |
| Alignm identity: | 927 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 38 |
| Conread position: | 890-1084 |
| Cow position: | chr23:36540291-36540093 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 903-1063 |
| Cow position: | chr23:10025041-10024877 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 904-1090 |
| Cow position: | chr23:18109630-18109437 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 36, 176 |
| Conread position: | 904-1092 |
| Cow position: | chr23:28715254-28715445 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 105, 41 |
| Conread position: | 940-1092 |
| Cow position: | chr24:23221509-23221352 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 905-1092 |
| Cow position: | chr25:18988054-18987871 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 912-1052 |
| Cow position: | chr25:11308616-11308756 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 900-1086 |
| Cow position: | chr26:34235492-34235304 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 47 |
| Conread position: | 909-1089 |
| Cow position: | chr26:6203470-6203657 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 896-1053 |
| Cow position: | chr28:27326761-27326601 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 905-1091 |
| Cow position: | chr28:5819019-5818825 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 903-1085 |
| Cow position: | chr3:4562335-4562519 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 904-1053 |
| Cow position: | chr3:4017391-4017241 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 42 |
| Conread position: | 908-1071 |
| Cow position: | chr3:46486990-46487156 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 904-1092 |
| Cow position: | chr4:51413027-51413216 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 910-1068 |
| Cow position: | chr4:27705755-27705593 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 902-1092 |
| Cow position: | chr5:12130035-12129845 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 45 |
| Conread position: | 904-1092 |
| Cow position: | chr6:25581822-25581635 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 904-1092 |
| Cow position: | chr6:47860153-47860340 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 41 |
| Conread position: | 903-1053 |
| Cow position: | chr7:37790605-37790756 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 44 |
| Conread position: | 901-1062 |
| Cow position: | chr8:39722814-39722647 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 901-1062 |
| Cow position: | chr8:39725561-39725728 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 902-1088 |
| Cow position: | chr8:26850834-26851017 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 912-1064 |
| Cow position: | chr8:36254678-36254834 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 903-1092 |
| Cow position: | chr9:9682656-9682461 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 901-1090 |
| Cow position: | chrX:22882663-22882852 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 904-1081 |
| Cow position: | chrX:33645234-33645415 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 42 |