Cow genome map
| Conread name: | Ss1.1-rsug02_j10.5 |
| Conread position: | 1086-2315 |
| Cow position: | chr17:30999759-31000977 (view UCSC Genome Browser custom track) |
| Alignm length: | 1240 |
| Alignm identity: | 1049 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 48 |
| Conread position: | 1-209 |
| Cow position: | chr19:42629375-42629167 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-373 |
| Cow position: | chr19:42627985-42627819 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 374-470 |
| Cow position: | chr19:42627633-42627537 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-604 |
| Cow position: | chr19:42627466-42627323 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 131 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 671-820 |
| Cow position: | chr19:42626903-42626754 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 137 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 811-973 |
| Cow position: | chr19:42626679-42626517 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 974-1057 |
| Cow position: | chr19:42626413-42626330 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1148-1259 |
| Cow position: | chr19:42625992-42625881 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1369-1606 |
| Cow position: | chr19:42624170-42623933 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1602-2311 |
| Cow position: | chr19:42623748-42623040 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 700 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 593, 0 |
| Conread position: | 1930-2316 |
| Cow position: | chr29:35109668-35109296 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 41 |
| Conread position: | 209-363 |
| Cow position: | chr5:68010052-68010206 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 677-821 |
| Cow position: | chr5:68013160-68013304 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 974-1138 |
| Cow position: | chr5:68013835-68014000 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 155, 150 |
| Conread position: | 1378-1599 |
| Cow position: | chr5:68019839-68020060 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |