Cow genome map
| Conread name: | Ss1.1-rsug26_p8.5.5 |
| Conread position: | 337-1183 |
| Cow position: | chr1:64844076-64844918 (view UCSC Genome Browser custom track) |
| Alignm length: | 848 |
| Alignm identity: | 768 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 315 |
| Conread position: | 337-1184 |
| Cow position: | chr1:51835860-51835014 (view UCSC Genome Browser custom track) |
| Alignm length: | 848 |
| Alignm identity: | 769 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 827, 0 |
| Conread position: | 367-1078 |
| Cow position: | chr1:75997861-75997154 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 601 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 34 |
| Conread position: | 792-1130 |
| Cow position: | chr1:69857066-69856742 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 1065-1199 |
| Cow position: | chr1:75996785-75996652 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 337-1129 |
| Cow position: | chr11:44339017-44339795 (view UCSC Genome Browser custom track) |
| Alignm length: | 807 |
| Alignm identity: | 602 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 94 |
| Conread position: | 337-1215 |
| Cow position: | chr11:69257143-69258020 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 773 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 826, 0 |
| Conread position: | 444-625 |
| Cow position: | chr11:3862969-3862789 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 337-1193 |
| Cow position: | chr14:1888353-1889208 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 789 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 826, 0 |
| Conread position: | 429-560 |
| Cow position: | chr18:12236381-12236513 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 979-1180 |
| Cow position: | chr18:12236821-12237013 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 164 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 331-1069 |
| Cow position: | chr2:65923172-65922416 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 337-819 |
| Cow position: | chr2:75904724-75905204 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 177 |
| Conread position: | 384-805 |
| Cow position: | chr2:55400305-55400744 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 826-1171 |
| Cow position: | chr2:75906838-75907179 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 153 |
| Conread position: | 935-1184 |
| Cow position: | chr2:58688131-58688381 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 41, 179 |
| Conread position: | 328-1188 |
| Cow position: | chr20:8740409-8739556 (view UCSC Genome Browser custom track) |
| Alignm length: | 862 |
| Alignm identity: | 774 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 641 |
| Conread position: | 332-1195 |
| Cow position: | chr20:2015502-2014645 (view UCSC Genome Browser custom track) |
| Alignm length: | 864 |
| Alignm identity: | 777 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 422, 0 |
| Conread position: | 329-1175 |
| Cow position: | chr25:24035419-24034600 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 731 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 330-1175 |
| Cow position: | chr25:27187159-27187979 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 706 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 791, 10 |
| Conread position: | 313-1191 |
| Cow position: | chr27:18593065-18592193 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 778 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 345 |
| Conread position: | 816-1185 |
| Cow position: | chr28:22375493-22375860 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 278 |
| Conread position: | 337-1179 |
| Cow position: | chr3:59644313-59645148 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 701 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 341-1206 |
| Cow position: | chr5:59524526-59525365 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 688 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 234 |
| Conread position: | 473-1186 |
| Cow position: | chr5:12695064-12695774 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 644 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 354 |
| Conread position: | 343-1118 |
| Cow position: | chr6:23480076-23480838 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 636 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 592 |
| Conread position: | 336-519 |
| Cow position: | chrX:5093490-5093307 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 519-851 |
| Cow position: | chrX:5092953-5092623 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 843-1178 |
| Cow position: | chrX:5092340-5092014 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |