Cow genome map
| Conread name: | Ss1.1-rthg09_d14.5 |
| Conread position: | 1-101 |
| Cow position: | chr1:161337-161236 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-130 |
| Cow position: | chr1:8906619-8906742 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-145 |
| Cow position: | chr10:40314775-40314915 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 60-276 |
| Cow position: | chr10:14622577-14622805 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 1-276 |
| Cow position: | chr11:67283974-67284260 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 1-287 |
| Cow position: | chr11:19728592-19728292 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 67-229 |
| Cow position: | chr12:30842835-30842674 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 2-276 |
| Cow position: | chr15:2109584-2109294 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 32 |
| Conread position: | 1-287 |
| Cow position: | chr19:42922656-42922954 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 1-287 |
| Cow position: | chr2:1242110-1241821 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-119 |
| Cow position: | chr22:35737672-35737557 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 114 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-262 |
| Cow position: | chr22:45621169-45621442 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 5-208 |
| Cow position: | chr23:5422958-5423160 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-208 |
| Cow position: | chr24:32145382-32145177 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 31 |
| Conread position: | 1-281 |
| Cow position: | chr24:15448623-15448911 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 31 |
| Conread position: | 3-288 |
| Cow position: | chr27:30550294-30550009 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 32-287 |
| Cow position: | chr27:14706390-14706650 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 44 |
| Conread position: | 11-122 |
| Cow position: | chr28:13881575-13881686 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 93 |
| Conread position: | 2-287 |
| Cow position: | chr3:17723564-17723269 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 64-276 |
| Cow position: | chr3:2886299-2886057 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 20-271 |
| Cow position: | chr4:46919553-46919301 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 210, 14 |
| Conread position: | 1-224 |
| Cow position: | chr5:2003182-2002976 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 196, 17 |
| Conread position: | 1-287 |
| Cow position: | chr5:62311369-62311084 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 10 |
| Conread position: | 3-274 |
| Cow position: | chr5:61090513-61090798 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 1-143 |
| Cow position: | chr6:55004228-55004366 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 127 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-276 |
| Cow position: | chr7:65486211-65486494 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 31 |
| Conread position: | 1-287 |
| Cow position: | chr7:63142260-63142555 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 1-287 |
| Cow position: | chr9:24247076-24247374 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 31 |