Cow genome map

Conread name: Ss1.1-rton1228b_k22.5

Conread position: 1235-1380
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 1233-1374
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-497
Cow position:
Alignm length: 525
Alignm identity: 334
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 325

Conread position: 2-497
Cow position:
Alignm length: 499
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 0

Conread position: 2-497
Cow position:
Alignm length: 499
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 0

Conread position: 4-497
Cow position:
Alignm length: 497
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 0

Conread position: 82-497
Cow position:
Alignm length: 422
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 87-497
Cow position:
Alignm length: 437
Alignm identity: 296
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 287

Conread position: 110-497
Cow position:
Alignm length: 415
Alignm identity: 281
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 70

Conread position: 118-497
Cow position:
Alignm length: 386
Alignm identity: 260
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 107

Conread position: 118-497
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 172-497
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 85

Conread position: 185-497
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 206, 122

Conread position: 265-497
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 59

Conread position: 285-497
Cow position:
Alignm length: 213
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 300-525
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 17, 217

Conread position: 304-497
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 316-497
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 321-497
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 340-511
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 162, 0

Conread position: 352-497
Cow position:
Alignm length: 146
Alignm identity: 124
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 357-497
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 374-498
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 374-512
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 374-512
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 374-512
Cow position:
Alignm length: 139
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 374-512
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 374-512
Cow position:
Alignm length: 139
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 376-497
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 480-704
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 494-712
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 494-712
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 494-712
Cow position:
Alignm length: 219
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 494-712
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 494-712
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 494-712
Cow position:
Alignm length: 219
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 494-712
Cow position:
Alignm length: 219
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 494-712
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 76, 85

Conread position: 494-712
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 81

Conread position: 494-712
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 85

Conread position: 494-712
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 156, 163

Conread position: 494-712
Cow position:
Alignm length: 225
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 494-712
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 494-712
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 156, 66

Conread position: 494-713
Cow position:
Alignm length: 222
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 136

Conread position: 494-715
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 494-715
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 73, 82

Conread position: 494-718
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 89, 78

Conread position: 494-730
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 85

Conread position: 494-739
Cow position:
Alignm length: 246
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 517-713
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 157

Conread position: 770-866
Cow position:
Alignm length: 97
Alignm identity: 90
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 770-868
Cow position:
Alignm length: 99
Alignm identity: 91
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 864-1032
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 864-1032
Cow position:
Alignm length: 170
Alignm identity: 140
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 864-1039
Cow position:
Alignm length: 177
Alignm identity: 147
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 8, 171

Conread position: 868-1032
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 868-1032
Cow position:
Alignm length: 165
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 868-1032
Cow position:
Alignm length: 165
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 868-1032
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 868-1032
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 868-1032
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 868-1032
Cow position:
Alignm length: 165
Alignm identity: 138
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 868-1043
Cow position:
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 166, 0

Conread position: 868-1047
Cow position:
Alignm length: 180
Alignm identity: 149
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 166, 0

Conread position: 868-1050
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 166, 0

Conread position: 872-1040
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 162, 0

Conread position: 874-1032
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 874-1032
Cow position:
Alignm length: 159
Alignm identity: 130
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 878-1051
Cow position:
Alignm length: 174
Alignm identity: 140
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 156, 0

Conread position: 880-1024
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 111

Conread position: 880-1024
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 111

Conread position: 883-1022
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 112, 108

Conread position: 883-1024
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 115, 108

Conread position: 883-1024
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 115, 108

Conread position: 887-1024
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 111, 104

Conread position: 889-1064
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 103

Conread position: 911-1032
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1028-1158
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1031-1158
Cow position:
Alignm length: 128
Alignm identity: 109
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1031-1158
Cow position:
Alignm length: 128
Alignm identity: 118
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1031-1158
Cow position:
Alignm length: 128
Alignm identity: 115
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1031-1158
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1037-1158
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1039-1158
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1039-1178
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 1155-1380
Cow position:
Alignm length: 226
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1155-1380
Cow position:
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 15

Conread position: 1156-1374
Cow position:
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1156-1374
Cow position:
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1156-1380
Cow position:
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1156-1380
Cow position:
Alignm length: 225
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1156-1380
Cow position:
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 75

Conread position: 1156-1380
Cow position:
Alignm length: 226
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 75

Conread position: 1156-1387
Cow position:
Alignm length: 232
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 1156-1394
Cow position:
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 226

Conread position: 1156-1395
Cow position:
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 1156-1426
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 226

Conread position: 1157-1380
Cow position:
Alignm length: 224
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1157-1380
Cow position:
Alignm length: 224
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1157-1380
Cow position:
Alignm length: 224
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1162-1380
Cow position:
Alignm length: 219
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1162-1380
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1162-1380
Cow position:
Alignm length: 219
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1163-1371
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 118, 141

Conread position: 1163-1374
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1163-1374
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1163-1374
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 1163-1374
Cow position:
Alignm length: 212
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1163-1400
Cow position:
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 1168-1380
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1168-1380
Cow position:
Alignm length: 213
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1178-1380
Cow position:
Alignm length: 203
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1189-1380
Cow position:
Alignm length: 192
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1212-1399
Cow position:
Alignm length: 189
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 171

Conread position: 1242-1394
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 0

Conread position: 1420-1842
Cow position:
Alignm length: 436
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 211

Conread position: 1441-1925
Cow position:
Alignm length: 499
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 189

Conread position: 1441-2032
Cow position:
Alignm length: 622
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 189