Cow genome map


           Conread name:
           Ss1.1-ruio32_h12.5
        

               Conread position:
               894-1267
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 100
               

               Conread position:
               1075-1283
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 68
               

               Conread position:
               7-164
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               158-284
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               267-1274
               

               Cow position:
               
               

               Alignm length:
               1071
               

               Alignm identity:
               838
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               1037-1269
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 149
               

               Conread position:
               461-652
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               723-1188
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 78
               

               Conread position:
               3-1256
               

               Cow position:
               
               

               Alignm length:
               1312
               

               Alignm identity:
               1045
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 140
               

               Conread position:
               470-677
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 51
               

               Conread position:
               798-1268
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               1015-1183
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               146
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1138-1285
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               300-792
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 26
               

               Conread position:
               530-931
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               225-436
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               839-1256
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 116
               

               Conread position:
               929-1239
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 25
               

               Conread position:
               792-1263
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               894-1150
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 127
               

               Conread position:
               938-1070
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1112-1277
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               5-824
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               672
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 318
               

               Conread position:
               839-958
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               1139-1292
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               1111-1247
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 77
               

               Conread position:
               5-136
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               703-1271
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 49
               

               Conread position:
               846-1070
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 102
               

               Conread position:
               277-550
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               420-807
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               1146-1293
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               135-461
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               470-699
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               66, 60
               

               Conread position:
               305-436
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               581-1255
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               952-1284
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 12
               

               Conread position:
               1027-1265
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               1050-1291
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               1072-1239
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1074-1243
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               1091-1248
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 99
               

               Conread position:
               5-463
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 196
               

               Conread position:
               477-1119
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               994-1274
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               1126-1254
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 64
               

               Conread position:
               470-658
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 172
               

               Conread position:
               1020-1287
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 169
               

               Conread position:
               1027-1199
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               1111-1292
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 14
               

               Conread position:
               6-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               155-446
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 46
               

               Conread position:
               1081-1265
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               74, 57
               

               Conread position:
               1082-1287
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               1134-1285
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               5-1227
               

               Cow position:
               
               

               Alignm length:
               1266
               

               Alignm identity:
               976
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 201
               

               Conread position:
               238-533
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 24
               

               Conread position:
               519-884
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               760-1274
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 158
               

               Conread position:
               891-1100
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 41
               

               Conread position:
               1032-1272
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 157
               

               Conread position:
               1111-1282
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 77
               

               Conread position:
               388-985
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 149
               

               Conread position:
               851-1289
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               1061-1288
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               1116-1273
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               711-1272
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 111