Non-Coding RNA Search

Cow genome map


           Conread name:
           Thy1-THY010012A03
        

               Conread position:
               15-476
               

               Cow position:
               chr10:4711381-4710896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               15-479
               

               Cow position:
               chr10:44765738-44765256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               16-485
               

               Cow position:
               chr10:23413107-23412617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               317
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               20, 183
               

               Conread position:
               18-478
               

               Cow position:
               chr10:10859482-10859969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               19-479
               

               Cow position:
               chr10:6012286-6012757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 349
               

               Conread position:
               34-478
               

               Cow position:
               chr10:23648248-23648716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               34-485
               

               Cow position:
               chr10:10586165-10585691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               314
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               61-431
               

               Cow position:
               chr10:20552232-20551838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 148
               

               Conread position:
               61-485
               

               Cow position:
               chr10:32704779-32704333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               78, 138
               

               Conread position:
               112-480
               

               Cow position:
               chr10:24743914-24743539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               153-464
               

               Cow position:
               chr10:31534344-31534026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               199-480
               

               Cow position:
               chr10:40388677-40388397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               128, 142
               

               Conread position:
               204-454
               

               Cow position:
               chr10:31853523-31853270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               170, 136
               

               Conread position:
               204-457
               

               Cow position:
               chr10:28775679-28775423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               204-464
               

               Cow position:
               chr10:20372579-20372840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               106, 98
               

               Conread position:
               204-476
               

               Cow position:
               chr10:33665380-33665105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-477
               

               Cow position:
               chr10:24296622-24296895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               121, 113
               

               Conread position:
               204-479
               

               Cow position:
               chr10:45484156-45484434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               123, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr10:54799292-54799013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               123, 137
               

               Conread position:
               204-485
               

               Cow position:
               chr10:39037200-39037480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               116, 133
               

               Conread position:
               204-486
               

               Cow position:
               chr10:51288551-51288267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 98
               

               Conread position:
               206-465
               

               Cow position:
               chr10:288149-288420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               208-478
               

               Cow position:
               chr10:21490776-21490500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 135
               

               Conread position:
               208-485
               

               Cow position:
               chr10:28236340-28236072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               160, 109
               

               Conread position:
               208-485
               

               Cow position:
               chr10:64304190-64304466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               612-748
               

               Cow position:
               chr10:49659048-49659183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               38, 89
               

               Conread position:
               7-433
               

               Cow position:
               chr11:17937271-17937713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 116
               

               Conread position:
               15-476
               

               Cow position:
               chr11:3393454-3393943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               308
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               27, 197
               

               Conread position:
               15-478
               

               Cow position:
               chr11:13061467-13061947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               16-478
               

               Cow position:
               chr11:11991701-11991214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               317
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               20, 187
               

               Conread position:
               20-477
               

               Cow position:
               chr11:46780371-46780854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 182
               

               Conread position:
               34-485
               

               Cow position:
               chr11:33600953-33601430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               309
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               25, 177
               

               Conread position:
               51-460
               

               Cow position:
               chr11:37278481-37278908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               64-477
               

               Cow position:
               chr11:65409459-65409874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 239
               

               Conread position:
               153-480
               

               Cow position:
               chr11:52297626-52297948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               168, 15
               

               Conread position:
               161-384
               

               Cow position:
               chr11:31429342-31429565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-479
               

               Cow position:
               chr11:76603439-76603115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               195-477
               

               Cow position:
               chr11:67295506-67295791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 124
               

               Conread position:
               204-401
               

               Cow position:
               chr11:10807646-10807845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               204-483
               

               Cow position:
               chr11:16757605-16757887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               106, 98
               

               Conread position:
               204-485
               

               Cow position:
               chr11:34841657-34841939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               206-405
               

               Cow position:
               chr11:75370157-75369956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               206-478
               

               Cow position:
               chr11:43844876-43845152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               167, 117
               

               Conread position:
               206-478
               

               Cow position:
               chr11:68276462-68276185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 77
               

               Conread position:
               208-464
               

               Cow position:
               chr11:75195656-75195916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               231-474
               

               Cow position:
               chr11:12316597-12316843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               89, 106
               

               Conread position:
               1-485
               

               Cow position:
               chr12:8556583-8556094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               18-485
               

               Cow position:
               chr12:40868318-40867825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               320
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               29-478
               

               Cow position:
               chr12:27851682-27852156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               30-485
               

               Cow position:
               chr12:10932058-10931578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 170
               

               Conread position:
               34-478
               

               Cow position:
               chr12:27928759-27929228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               299
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               34-485
               

               Cow position:
               chr12:550646-551121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               34-485
               

               Cow position:
               chr12:9107164-9106689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               60-478
               

               Cow position:
               chr12:11102186-11101746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               294
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               76, 138
               

               Conread position:
               65-479
               

               Cow position:
               chr12:8718437-8718872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 132
               

               Conread position:
               208-478
               

               Cow position:
               chr12:31328559-31328831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 133
               

               Conread position:
               211-478
               

               Cow position:
               chr12:22201913-22202183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               106, 130
               

               Conread position:
               17-478
               

               Cow position:
               chr13:34346081-34345592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               25, 187
               

               Conread position:
               30-464
               

               Cow position:
               chr13:7465334-7465794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 171
               

               Conread position:
               34-478
               

               Cow position:
               chr13:31607680-31608148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               34-485
               

               Cow position:
               chr13:30468360-30468834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               311
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               25, 166
               

               Conread position:
               153-453
               

               Cow position:
               chr13:34263012-34262705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               182-418
               

               Cow position:
               chr13:6900374-6900612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 170
               

               Conread position:
               184-476
               

               Cow position:
               chr13:6079041-6078746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               204-475
               

               Cow position:
               chr13:11795135-11795411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 52
               

               Conread position:
               204-475
               

               Cow position:
               chr13:23266267-23266540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               118, 126
               

               Conread position:
               204-477
               

               Cow position:
               chr13:3015743-3015472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               172, 130
               

               Conread position:
               205-464
               

               Cow position:
               chr13:21135298-21135035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 97
               

               Conread position:
               206-351
               

               Cow position:
               chr13:13289446-13289591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               208-485
               

               Cow position:
               chr13:32921750-32922029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 94
               

               Conread position:
               210-485
               

               Cow position:
               chr13:18329564-18329841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 74
               

               Conread position:
               231-485
               

               Cow position:
               chr13:20777928-20778183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               89, 110
               

               Conread position:
               16-446
               

               Cow position:
               chr14:39891535-39891994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               16-477
               

               Cow position:
               chr14:22026130-22026617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               16-478
               

               Cow position:
               chr14:12903967-12903493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               299
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 334
               

               Conread position:
               16-485
               

               Cow position:
               chr14:32583385-32583882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               320
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               20, 198
               

               Conread position:
               17-485
               

               Cow position:
               chr14:12739401-12739895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               19, 186
               

               Conread position:
               18-477
               

               Cow position:
               chr14:45738683-45739165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               313
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               23, 186
               

               Conread position:
               18-478
               

               Cow position:
               chr14:34675745-34675258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               18-485
               

               Cow position:
               chr14:28992705-28993199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               324
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               24, 186
               

               Conread position:
               18-485
               

               Cow position:
               chr14:41080996-41081488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               320
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               24, 186
               

               Conread position:
               18-485
               

               Cow position:
               chr14:44026169-44026662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               18, 195
               

               Conread position:
               19-485
               

               Cow position:
               chr14:27039744-27040232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 185
               

               Conread position:
               36-475
               

               Cow position:
               chr14:11468889-11468432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 167
               

               Conread position:
               61-457
               

               Cow position:
               chr14:23107687-23108099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               199-449
               

               Cow position:
               chr14:38739697-38739949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 142
               

               Conread position:
               204-479
               

               Cow position:
               chr14:33773407-33773130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 93
               

               Conread position:
               204-480
               

               Cow position:
               chr14:37334550-37334829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 88
               

               Conread position:
               205-479
               

               Cow position:
               chr14:18497420-18497144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 100
               

               Conread position:
               208-478
               

               Cow position:
               chr14:5491867-5492140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               208-486
               

               Cow position:
               chr14:16996316-16996597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               107, 97
               

               Conread position:
               226-477
               

               Cow position:
               chr14:13309146-13308892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 115
               

               Conread position:
               226-485
               

               Cow position:
               chr14:44692564-44692303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               94, 115
               

               Conread position:
               231-485
               

               Cow position:
               chr14:15271855-15272111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 110
               

               Conread position:
               231-485
               

               Cow position:
               chr14:24980957-24980701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 106
               

               Conread position:
               3-454
               

               Cow position:
               chr15:28038096-28038572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               40, 460
               

               Conread position:
               8-478
               

               Cow position:
               chr15:12417054-12417551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               16-485
               

               Cow position:
               chr15:27746862-27747360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               331
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               11, 187
               

               Conread position:
               18-473
               

               Cow position:
               chr15:38984326-38983843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 197
               

               Conread position:
               18-485
               

               Cow position:
               chr15:4389399-4388905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               19-478
               

               Cow position:
               chr15:4728799-4728314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               311
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 194
               

               Conread position:
               51-424
               

               Cow position:
               chr15:13669551-13669157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               51-480
               

               Cow position:
               chr15:37381976-37382425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               287
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 160
               

               Conread position:
               61-466
               

               Cow position:
               chr15:38394987-38395414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               61-473
               

               Cow position:
               chr15:34895318-34894884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               280
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               80, 137
               

               Conread position:
               61-477
               

               Cow position:
               chr15:31356997-31357436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               295
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               75, 138
               

               Conread position:
               170-464
               

               Cow position:
               chr15:14719507-14719215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 14
               

               Conread position:
               184-434
               

               Cow position:
               chr15:31601271-31601513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               184-434
               

               Cow position:
               chr15:31909718-31909965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               204-452
               

               Cow position:
               chr15:36781781-36781529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-478
               

               Cow position:
               chr15:312362-312636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr15:11958079-11958358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr15:24968315-24968593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               118, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr15:45245029-45244751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               206-437
               

               Cow position:
               chr15:36298608-36298843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               208-477
               

               Cow position:
               chr15:7271777-7271504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               208-485
               

               Cow position:
               chr15:42533476-42533204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 134
               

               Conread position:
               226-478
               

               Cow position:
               chr15:2898837-2899094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               94, 115
               

               Conread position:
               232-478
               

               Cow position:
               chr15:32489052-32489301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 105
               

               Conread position:
               3-478
               

               Cow position:
               chr16:5350190-5350692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               16-476
               

               Cow position:
               chr16:41806-41353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               306
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               16-478
               

               Cow position:
               chr16:5436130-5435641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               16-478
               

               Cow position:
               chr16:12534663-12535152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               16-478
               

               Cow position:
               chr16:24240096-24240584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               317
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               16-478
               

               Cow position:
               chr16:28467817-28468307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               316
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               16-485
               

               Cow position:
               chr16:3147736-3148229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               313
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 198
               

               Conread position:
               16-485
               

               Cow position:
               chr16:28205813-28206301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               316
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               18-485
               

               Cow position:
               chr16:43893960-43894451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               30-473
               

               Cow position:
               chr16:2962568-2963036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               30-485
               

               Cow position:
               chr16:5489160-5488681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               310
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               32, 181
               

               Conread position:
               34-485
               

               Cow position:
               chr16:2479875-2480345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               35-479
               

               Cow position:
               chr16:2723941-2724409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               306
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               24, 165
               

               Conread position:
               61-475
               

               Cow position:
               chr16:23472467-23472041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 128
               

               Conread position:
               65-479
               

               Cow position:
               chr16:3596782-3597219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 296
               

               Conread position:
               170-476
               

               Cow position:
               chr16:45654439-45654757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               170-479
               

               Cow position:
               chr16:50036484-50036168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               175-455
               

               Cow position:
               chr16:25454352-25454640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               175-477
               

               Cow position:
               chr16:31619064-31619371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 296
               

               Conread position:
               181-464
               

               Cow position:
               chr16:34310806-34310517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               204-454
               

               Cow position:
               chr16:13792089-13791839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               117, 123
               

               Conread position:
               204-464
               

               Cow position:
               chr16:22124607-22124870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-464
               

               Cow position:
               chr16:31122693-31122954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               164, 119
               

               Conread position:
               204-477
               

               Cow position:
               chr16:3338471-3338195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-477
               

               Cow position:
               chr16:28193208-28193484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               116, 133
               

               Conread position:
               204-480
               

               Cow position:
               chr16:25174327-25174048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               119, 137
               

               Conread position:
               205-453
               

               Cow position:
               chr16:8000542-8000290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 136
               

               Conread position:
               206-479
               

               Cow position:
               chr16:24147731-24147465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               208-477
               

               Cow position:
               chr16:23248873-23249138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               101, 94
               

               Conread position:
               226-485
               

               Cow position:
               chr16:3768937-3769198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               91, 111
               

               Conread position:
               16-485
               

               Cow position:
               chr17:6263723-6263224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               320
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               18-478
               

               Cow position:
               chr17:2584509-2584028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               314
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               30-485
               

               Cow position:
               chr17:16904426-16903949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               64-479
               

               Cow position:
               chr17:18884563-18885001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 135
               

               Conread position:
               64-485
               

               Cow position:
               chr17:21666812-21666369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               289
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               69, 136
               

               Conread position:
               204-436
               

               Cow position:
               chr17:27679653-27679886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               166, 116
               

               Conread position:
               204-437
               

               Cow position:
               chr17:26803214-26803449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 96
               

               Conread position:
               205-476
               

               Cow position:
               chr17:5042541-5042808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               116, 182
               

               Conread position:
               208-480
               

               Cow position:
               chr17:23663407-23663141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               15-479
               

               Cow position:
               chr18:42966581-42966088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 189
               

               Conread position:
               20-459
               

               Cow position:
               chr18:6829324-6829794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 187
               

               Conread position:
               30-464
               

               Cow position:
               chr18:6732901-6733358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               301
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               29, 171
               

               Conread position:
               34-478
               

               Cow position:
               chr18:29862542-29863009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               57-479
               

               Cow position:
               chr18:30248432-30248865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               117, 293
               

               Conread position:
               61-448
               

               Cow position:
               chr18:33407314-33406919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               89, 108
               

               Conread position:
               112-475
               

               Cow position:
               chr18:7076394-7076027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               193-479
               

               Cow position:
               chr18:30435230-30435509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               13, 183
               

               Conread position:
               198-480
               

               Cow position:
               chr18:36785204-36784930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               8, 179
               

               Conread position:
               201-480
               

               Cow position:
               chr18:9365422-9365140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               120, 140
               

               Conread position:
               203-479
               

               Cow position:
               chr18:20151472-20151189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 257
               

               Conread position:
               204-479
               

               Cow position:
               chr18:22790538-22790812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               206-477
               

               Cow position:
               chr18:183653-183377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               165, 235
               

               Conread position:
               206-477
               

               Cow position:
               chr18:46850185-46849924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               208-478
               

               Cow position:
               chr18:26306137-26305872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 177
               

               Conread position:
               208-485
               

               Cow position:
               chr18:40484868-40484592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               112, 14
               

               Conread position:
               208-485
               

               Cow position:
               chr18:51485459-51485180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               12, 95
               

               Conread position:
               211-485
               

               Cow position:
               chr18:16172750-16173020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               98, 91
               

               Conread position:
               7-397
               

               Cow position:
               chr19:32722136-32721742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               269
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               18-465
               

               Cow position:
               chr19:5733572-5733112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               301
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               18-478
               

               Cow position:
               chr19:12777308-12776846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               34-475
               

               Cow position:
               chr19:5043630-5044092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 177
               

               Conread position:
               61-479
               

               Cow position:
               chr19:1580867-1581301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 131
               

               Conread position:
               64-336
               

               Cow position:
               chr19:18115435-18115708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               99, 27
               

               Conread position:
               170-475
               

               Cow position:
               chr19:41213629-41213931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               204-479
               

               Cow position:
               chr19:44144359-44144635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               167, 119
               

               Conread position:
               206-478
               

               Cow position:
               chr19:9114841-9115109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               208-485
               

               Cow position:
               chr19:33877294-33877015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               223-478
               

               Cow position:
               chr19:48534580-48534326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               14-478
               

               Cow position:
               chr20:22209678-22209189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               15-457
               

               Cow position:
               chr20:18413672-18413213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               18-479
               

               Cow position:
               chr20:23792419-23791939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 188
               

               Conread position:
               60-478
               

               Cow position:
               chr20:15089366-15089805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               61-478
               

               Cow position:
               chr20:23803158-23802718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 138
               

               Conread position:
               148-480
               

               Cow position:
               chr20:10913671-10914011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               199-430
               

               Cow position:
               chr20:11887010-11887241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 155
               

               Conread position:
               204-479
               

               Cow position:
               chr20:22007060-22006784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               116, 126
               

               Conread position:
               205-464
               

               Cow position:
               chr20:7183114-7183375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               171, 214
               

               Conread position:
               208-478
               

               Cow position:
               chr20:27877323-27877051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 14
               

               Conread position:
               231-485
               

               Cow position:
               chr20:6550180-6550436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               90, 106
               

               Conread position:
               15-464
               

               Cow position:
               chr21:28477460-28476986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               17-485
               

               Cow position:
               chr21:2877675-2878167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 187
               

               Conread position:
               18-485
               

               Cow position:
               chr21:1196703-1196209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               316
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               18, 71
               

               Conread position:
               61-476
               

               Cow position:
               chr21:31512153-31512591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               72, 148
               

               Conread position:
               112-483
               

               Cow position:
               chr21:33350423-33350047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               170-457
               

               Cow position:
               chr21:33653462-33653169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 169
               

               Conread position:
               204-478
               

               Cow position:
               chr21:27607738-27608015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr21:29855299-29855021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 98
               

               Conread position:
               205-476
               

               Cow position:
               chr21:4276978-4277252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 87
               

               Conread position:
               207-404
               

               Cow position:
               chr21:34539654-34539453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               144, 167
               

               Conread position:
               208-478
               

               Cow position:
               chr21:27287926-27287651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               112, 263
               

               Conread position:
               208-479
               

               Cow position:
               chr21:37517744-37518018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               208-485
               

               Cow position:
               chr21:150097-149819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               1-472
               

               Cow position:
               chr22:12381096-12380627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               15-467
               

               Cow position:
               chr22:38439386-38439861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 150
               

               Conread position:
               15-479
               

               Cow position:
               chr22:32661284-32660806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               302
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               16-478
               

               Cow position:
               chr22:29398075-29397585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 198
               

               Conread position:
               16-485
               

               Cow position:
               chr22:8773012-8773506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               320
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 188
               

               Conread position:
               16-485
               

               Cow position:
               chr22:12224913-12225405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               321
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               20, 198
               

               Conread position:
               34-477
               

               Cow position:
               chr22:33950987-33951455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 177
               

               Conread position:
               34-478
               

               Cow position:
               chr22:22048227-22048695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               34-478
               

               Cow position:
               chr22:36857603-36858070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 165
               

               Conread position:
               34-485
               

               Cow position:
               chr22:39464566-39465042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               309
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               60-453
               

               Cow position:
               chr22:36193582-36193178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               61-478
               

               Cow position:
               chr22:556392-556827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               283
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               80, 137
               

               Conread position:
               193-479
               

               Cow position:
               chr22:7803222-7803499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               203-478
               

               Cow position:
               chr22:9982593-9982871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               167, 266
               

               Conread position:
               204-437
               

               Cow position:
               chr22:24066812-24067048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 94
               

               Conread position:
               204-462
               

               Cow position:
               chr22:28130519-28130256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               204-479
               

               Cow position:
               chr22:35161777-35162052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               113, 97
               

               Conread position:
               204-485
               

               Cow position:
               chr22:46568340-46568623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 98
               

               Conread position:
               2-464
               

               Cow position:
               chr23:17369888-17369400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 65
               

               Conread position:
               12-485
               

               Cow position:
               chr23:4892689-4892188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               323
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 193
               

               Conread position:
               12-485
               

               Cow position:
               chr23:15180930-15180450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               319
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               47, 116
               

               Conread position:
               15-457
               

               Cow position:
               chr23:13511510-13511047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               16-478
               

               Cow position:
               chr23:28916316-28915826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               318
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               22-477
               

               Cow position:
               chr23:28306824-28306344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               313
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               17, 179
               

               Conread position:
               35-485
               

               Cow position:
               chr23:11344458-11343985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 166
               

               Conread position:
               64-480
               

               Cow position:
               chr23:26306097-26305665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               284
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               204-464
               

               Cow position:
               chr23:1941712-1941447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-464
               

               Cow position:
               chr23:7844852-7844591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               114, 134
               

               Conread position:
               206-477
               

               Cow position:
               chr23:28611208-28610944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               208-478
               

               Cow position:
               chr23:2023318-2023590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               168, 132
               

               Conread position:
               221-474
               

               Cow position:
               chr23:22143552-22143808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               99, 120
               

               Conread position:
               235-714
               

               Cow position:
               chr23:18045738-18045242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               308
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               142, 73
               

               Conread position:
               61-479
               

               Cow position:
               chr24:24250424-24249983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               282
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               95, 261
               

               Conread position:
               170-367
               

               Cow position:
               chr24:20120486-20120688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               175-479
               

               Cow position:
               chr24:17309530-17309835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               200-480
               

               Cow position:
               chr24:30557087-30557356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               203-476
               

               Cow position:
               chr24:41006339-41006062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               117, 16
               

               Conread position:
               206-479
               

               Cow position:
               chr24:38620316-38620044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               228, 168
               

               Conread position:
               208-485
               

               Cow position:
               chr24:12331843-12332122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               76, 84
               

               Conread position:
               226-478
               

               Cow position:
               chr24:9550104-9549853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               94, 115
               

               Conread position:
               18-478
               

               Cow position:
               chr25:18323583-18324069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 186
               

               Conread position:
               18-478
               

               Cow position:
               chr25:39386061-39386544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 184
               

               Conread position:
               30-478
               

               Cow position:
               chr25:9596071-9595604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               301
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               30-485
               

               Cow position:
               chr25:41121764-41121283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               308
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 180
               

               Conread position:
               34-479
               

               Cow position:
               chr25:11540864-11540409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 328
               

               Conread position:
               204-477
               

               Cow position:
               chr25:17562629-17562352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               117, 266
               

               Conread position:
               208-467
               

               Cow position:
               chr25:14506518-14506780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               177, 260
               

               Conread position:
               208-485
               

               Cow position:
               chr25:28863430-28863154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 129
               

               Conread position:
               1-428
               

               Cow position:
               chr26:14973148-14973579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               4-400
               

               Cow position:
               chr26:31529272-31528847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               7, 225
               

               Conread position:
               16-478
               

               Cow position:
               chr26:6843189-6843678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               16-478
               

               Cow position:
               chr26:14898118-14897632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 184
               

               Conread position:
               204-400
               

               Cow position:
               chr26:2328353-2328550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               208-444
               

               Cow position:
               chr26:377709-377949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               221-485
               

               Cow position:
               chr26:23591499-23591233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               89, 81
               

               Conread position:
               16-478
               

               Cow position:
               chr27:26330890-26330431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               297
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 119
               

               Conread position:
               16-485
               

               Cow position:
               chr27:12549291-12549787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               24, 188
               

               Conread position:
               16-485
               

               Cow position:
               chr27:12751502-12751024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               311
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               200-480
               

               Cow position:
               chr27:29895636-29895916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               186, 211
               

               Conread position:
               204-476
               

               Cow position:
               chr27:11470306-11470033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               173, 113
               

               Conread position:
               204-479
               

               Cow position:
               chr27:27527812-27527535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               105, 97
               

               Conread position:
               204-480
               

               Cow position:
               chr27:26644478-26644758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               116, 266
               

               Conread position:
               206-418
               

               Cow position:
               chr27:4255675-4255887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               169, 201
               

               Conread position:
               206-467
               

               Cow position:
               chr27:14664674-14664422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               170, 93
               

               Conread position:
               206-482
               

               Cow position:
               chr27:12018557-12018827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               167, 65
               

               Conread position:
               207-457
               

               Cow position:
               chr27:29007607-29007369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 20
               

               Conread position:
               209-485
               

               Cow position:
               chr27:1294018-1293740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               167, 260
               

               Conread position:
               15-452
               

               Cow position:
               chr28:7372470-7372937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 194
               

               Conread position:
               16-478
               

               Cow position:
               chr28:5747671-5748161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               18-477
               

               Cow position:
               chr28:26781861-26781374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 186
               

               Conread position:
               18-485
               

               Cow position:
               chr28:26727634-26728127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 186
               

               Conread position:
               19-378
               

               Cow position:
               chr28:16211319-16211701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               6, 343
               

               Conread position:
               61-479
               

               Cow position:
               chr28:5805249-5804807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               93, 138
               

               Conread position:
               204-464
               

               Cow position:
               chr28:26564177-26563917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               171, 121
               

               Conread position:
               204-478
               

               Cow position:
               chr28:786479-786205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               106, 86
               

               Conread position:
               204-479
               

               Cow position:
               chr28:25767796-25767517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 119
               

               Conread position:
               208-485
               

               Cow position:
               chr28:6047609-6047330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 94
               

               Conread position:
               1-381
               

               Cow position:
               chr29:15530255-15529868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               57, 283
               

               Conread position:
               15-457
               

               Cow position:
               chr29:13108109-13107644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               298
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               16-477
               

               Cow position:
               chr29:40497874-40498363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               318
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               18-485
               

               Cow position:
               chr29:32544121-32543647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 113
               

               Conread position:
               34-374
               

               Cow position:
               chr29:25423576-25423227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               25, 163
               

               Conread position:
               34-485
               

               Cow position:
               chr29:35077115-35076634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               53-478
               

               Cow position:
               chr29:45463194-45462747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               80, 145
               

               Conread position:
               185-465
               

               Cow position:
               chr29:5310943-5311230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               10, 273
               

               Conread position:
               194-477
               

               Cow position:
               chr29:12575924-12575642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 187
               

               Conread position:
               204-464
               

               Cow position:
               chr29:4001978-4001714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-464
               

               Cow position:
               chr29:6150507-6150770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               204-479
               

               Cow position:
               chr29:4875345-4875623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               105, 98
               

               Conread position:
               204-479
               

               Cow position:
               chr29:13553701-13553423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               172, 197
               

               Conread position:
               204-480
               

               Cow position:
               chr29:26263414-26263139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               116, 141
               

               Conread position:
               206-479
               

               Cow position:
               chr29:10236868-10237143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 180
               

               Conread position:
               207-457
               

               Cow position:
               chr29:6437734-6437486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               170, 77
               

               Conread position:
               208-479
               

               Cow position:
               chr29:20493841-20493570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               163, 118
               

               Conread position:
               208-485
               

               Cow position:
               chr29:16347999-16347721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               223-479
               

               Cow position:
               chr29:43729611-43729352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               77, 85
               

               Conread position:
               1-479
               

               Cow position:
               chr5:70289099-70289579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 50
               

               Conread position:
               9-376
               

               Cow position:
               chr5:53945905-53945535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 192
               

               Conread position:
               16-478
               

               Cow position:
               chr5:14635755-14636244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 187
               

               Conread position:
               18-477
               

               Cow position:
               chr5:21190040-21189554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               316
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               22, 186
               

               Conread position:
               18-478
               

               Cow position:
               chr5:29969431-29968943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               321
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               18, 186
               

               Conread position:
               18-485
               

               Cow position:
               chr5:7498162-7498656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               326
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               18, 186
               

               Conread position:
               34-477
               

               Cow position:
               chr5:70593201-70593666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               301
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               61-448
               

               Cow position:
               chr5:31097055-31097458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               93, 144
               

               Conread position:
               61-478
               

               Cow position:
               chr5:46677358-46676948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               127, 54
               

               Conread position:
               152-442
               

               Cow position:
               chr5:20779814-20780110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               153-479
               

               Cow position:
               chr5:35180899-35180566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               153-480
               

               Cow position:
               chr5:31145137-31145465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               184-478
               

               Cow position:
               chr5:73485251-73485551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               186-477
               

               Cow position:
               chr5:35478313-35478026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               241, 18
               

               Conread position:
               196-437
               

               Cow position:
               chr5:57148189-57147944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 225
               

               Conread position:
               199-399
               

               Cow position:
               chr5:42232118-42232322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               203-475
               

               Cow position:
               chr5:21828444-21828169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 138
               

               Conread position:
               204-476
               

               Cow position:
               chr5:52289368-52289093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               113, 140
               

               Conread position:
               204-479
               

               Cow position:
               chr5:23641409-23641687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr5:69771763-69771485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               172, 265
               

               Conread position:
               206-454
               

               Cow position:
               chr5:37715009-37715264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               206-464
               

               Cow position:
               chr5:49817129-49816877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               95, 159
               

               Conread position:
               206-480
               

               Cow position:
               chr5:35967786-35967516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               208-477
               

               Cow position:
               chr5:3789831-3789559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               208-478
               

               Cow position:
               chr5:7175906-7175633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               112, 136
               

               Conread position:
               208-478
               

               Cow position:
               chr5:10922453-10922180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               208-478
               

               Cow position:
               chr5:55631672-55631399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               112, 129
               

               Conread position:
               658-810
               

               Cow position:
               chr5:70289598-70289755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               3-477
               

               Cow position:
               chr6:8753484-8753980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               10-399
               

               Cow position:
               chr6:18771486-18771871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 158
               

               Conread position:
               16-478
               

               Cow position:
               chr6:51718519-51718030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 198
               

               Conread position:
               16-485
               

               Cow position:
               chr6:706958-706466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               312
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               19, 198
               

               Conread position:
               18-478
               

               Cow position:
               chr6:3271517-3272009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               18-478
               

               Cow position:
               chr6:6181764-6182252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               18-479
               

               Cow position:
               chr6:9737300-9737791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 188
               

               Conread position:
               30-485
               

               Cow position:
               chr6:479492-479014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               315
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               34-478
               

               Cow position:
               chr6:17050313-17049851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               34-485
               

               Cow position:
               chr6:11288524-11288999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               34-485
               

               Cow position:
               chr6:47039280-47039743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 131
               

               Conread position:
               51-479
               

               Cow position:
               chr6:6460035-6459582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               294
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               148-479
               

               Cow position:
               chr6:2607274-2606933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               170-479
               

               Cow position:
               chr6:48473462-48473156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               195-477
               

               Cow position:
               chr6:65942599-65942883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               175, 275
               

               Conread position:
               197-477
               

               Cow position:
               chr6:47527027-47526746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               168, 143
               

               Conread position:
               204-479
               

               Cow position:
               chr6:19060024-19059745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               204-480
               

               Cow position:
               chr6:63094408-63094129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               206-417
               

               Cow position:
               chr6:3515739-3515528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-420
               

               Cow position:
               chr6:29503635-29503417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               206-464
               

               Cow position:
               chr6:34476007-34476269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               117, 135
               

               Conread position:
               208-478
               

               Cow position:
               chr6:38872781-38873054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               208-485
               

               Cow position:
               chr6:15275494-15275772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 113
               

               Conread position:
               211-457
               

               Cow position:
               chr6:40358134-40358384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 130
               

               Conread position:
               226-465
               

               Cow position:
               chr6:65844784-65844541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               95, 115
               

               Conread position:
               226-478
               

               Cow position:
               chr6:41193076-41192821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               226-482
               

               Cow position:
               chr6:40814090-40813831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 115
               

               Conread position:
               15-479
               

               Cow position:
               chr7:62793600-62793109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               322
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               16-478
               

               Cow position:
               chr7:10427370-10427860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               34-478
               

               Cow position:
               chr7:3130851-3130384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               61-375
               

               Cow position:
               chr7:56668940-56669258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               61-479
               

               Cow position:
               chr7:40405270-40404831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               278
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               93, 147
               

               Conread position:
               61-480
               

               Cow position:
               chr7:61824087-61824510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 140
               

               Conread position:
               153-479
               

               Cow position:
               chr7:23130694-23130364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 15
               

               Conread position:
               154-479
               

               Cow position:
               chr7:47909426-47909756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 15
               

               Conread position:
               204-464
               

               Cow position:
               chr7:42593705-42593969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr7:18057912-18057638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 76
               

               Conread position:
               204-479
               

               Cow position:
               chr7:29509576-29509306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 88
               

               Conread position:
               206-376
               

               Cow position:
               chr7:59086702-59086533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               208-478
               

               Cow position:
               chr7:52167627-52167354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               208-478
               

               Cow position:
               chr7:58196327-58196601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 129
               

               Conread position:
               208-478
               

               Cow position:
               chr7:65869664-65869937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               109, 133
               

               Conread position:
               211-477
               

               Cow position:
               chr7:14134979-14135248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 130
               

               Conread position:
               211-478
               

               Cow position:
               chr7:40318536-40318266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               109, 130
               

               Conread position:
               221-485
               

               Cow position:
               chr7:55289757-55290019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               155, 119
               

               Conread position:
               231-485
               

               Cow position:
               chr7:46749787-46749540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               89, 106
               

               Conread position:
               3-413
               

               Cow position:
               chr8:36709401-36709837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               15-475
               

               Cow position:
               chr8:28229686-28230170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               313
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               15-479
               

               Cow position:
               chr8:40033031-40033520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               314
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               16-477
               

               Cow position:
               chr8:51856517-51856033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 198
               

               Conread position:
               18-474
               

               Cow position:
               chr8:655891-656374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               304
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               60-479
               

               Cow position:
               chr8:57136344-57135905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               94, 149
               

               Conread position:
               66-478
               

               Cow position:
               chr8:51675308-51674897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               139, 73
               

               Conread position:
               148-475
               

               Cow position:
               chr8:24872238-24872567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 196
               

               Conread position:
               181-479
               

               Cow position:
               chr8:31624944-31624640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               25, 153
               

               Conread position:
               204-479
               

               Cow position:
               chr8:29027046-29027324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr8:53451072-53450794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               204-480
               

               Cow position:
               chr8:55122880-55123160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               205-450
               

               Cow position:
               chr8:35989050-35988802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 236
               

               Conread position:
               207-478
               

               Cow position:
               chr8:19053303-19053033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               80, 85
               

               Conread position:
               208-478
               

               Cow position:
               chr8:17315613-17315341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               114, 133
               

               Conread position:
               208-485
               

               Cow position:
               chr8:14587854-14588129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               208-485
               

               Cow position:
               chr8:29012223-29011941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 94
               

               Conread position:
               208-485
               

               Cow position:
               chr8:35473315-35473046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               208-485
               

               Cow position:
               chr8:60067900-60067621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               211-485
               

               Cow position:
               chr8:812931-812654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               109, 130
               

               Conread position:
               226-485
               

               Cow position:
               chr8:8227403-8227663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 115
               

               Conread position:
               232-485
               

               Cow position:
               chr8:49284073-49284329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               88, 109
               

               Conread position:
               1-480
               

               Cow position:
               chr9:39215525-39215026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               16-478
               

               Cow position:
               chr9:6253456-6252967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               320
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               20, 198
               

               Conread position:
               16-485
               

               Cow position:
               chr9:42571108-42570612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               19-477
               

               Cow position:
               chr9:50899761-50900244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 186
               

               Conread position:
               61-470
               

               Cow position:
               chr9:42172556-42172127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 144
               

               Conread position:
               61-478
               

               Cow position:
               chr9:19155443-19155882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 138
               

               Conread position:
               61-485
               

               Cow position:
               chr9:27781069-27781515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               288
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               72, 148
               

               Conread position:
               112-480
               

               Cow position:
               chr9:22361384-22361759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               181-376
               

               Cow position:
               chr9:11814260-11814457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               198-382
               

               Cow position:
               chr9:7413879-7413694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               8, 87
               

               Conread position:
               204-478
               

               Cow position:
               chr9:7058375-7058648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr9:3075816-3075538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               204-479
               

               Cow position:
               chr9:18205739-18205461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               205-479
               

               Cow position:
               chr9:12162278-12161998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 98
               

               Conread position:
               205-479
               

               Cow position:
               chr9:18718016-18718288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               126, 136
               

               Conread position:
               206-400
               

               Cow position:
               chr9:23367650-23367836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               206-480
               

               Cow position:
               chr9:61520018-61519745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               173, 120
               

               Conread position:
               207-478
               

               Cow position:
               chr9:52753544-52753818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               113, 130
               

               Conread position:
               208-457
               

               Cow position:
               chr9:51177977-51178230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               208-478
               

               Cow position:
               chr9:31811253-31810980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               112, 129
               

               Conread position:
               231-442
               

               Cow position:
               chr9:8235898-8235683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               89, 110
               

               Conread position:
               1-382
               

               Cow position:
               chrX:11509896-11509477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               39, 352
               

               Conread position:
               1-464
               

               Cow position:
               chrX:15574070-15574561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 436
               

               Conread position:
               1-478
               

               Cow position:
               chrX:31343001-31342520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 6
               

               Conread position:
               5-477
               

               Cow position:
               chrX:23831638-23832122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               15-485
               

               Cow position:
               chrX:5353505-5353998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               16-471
               

               Cow position:
               chrX:18078109-18078593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               16-485
               

               Cow position:
               chrX:30143484-30143979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               320
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               18-478
               

               Cow position:
               chrX:2478829-2479316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 194
               

               Conread position:
               18-485
               

               Cow position:
               chrX:11949694-11950181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               19-479
               

               Cow position:
               chrX:38852955-38852469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               23-479
               

               Cow position:
               chrX:27407676-27408152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               318
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               34-479
               

               Cow position:
               chrX:6544036-6543575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 167
               

               Conread position:
               34-485
               

               Cow position:
               chrX:30180146-30180622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               308
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               28, 167
               

               Conread position:
               60-477
               

               Cow position:
               chrX:12092285-12092714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               73, 142
               

               Conread position:
               170-404
               

               Cow position:
               chrX:7394048-7394283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               170-477
               

               Cow position:
               chrX:41114824-41114513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               173-464
               

               Cow position:
               chrX:5639314-5639613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 172
               

               Conread position:
               182-440
               

               Cow position:
               chrX:31982016-31982281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               203-479
               

               Cow position:
               chrX:40365155-40365433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               173, 137
               

               Conread position:
               204-464
               

               Cow position:
               chrX:10301708-10301446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               172, 130
               

               Conread position:
               204-475
               

               Cow position:
               chrX:1055804-1056074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               170, 139
               

               Conread position:
               204-478
               

               Cow position:
               chrX:40545034-40545311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 137
               

               Conread position:
               204-479
               

               Cow position:
               chrX:2300468-2300190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               204-479
               

               Cow position:
               chrX:7805964-7805687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               167, 154
               

               Conread position:
               204-479
               

               Cow position:
               chrX:17663330-17663609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 199
               

               Conread position:
               204-480
               

               Cow position:
               chrX:4996203-4995924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               204-486
               

               Cow position:
               chrX:24292092-24292375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               113, 22
               

               Conread position:
               205-453
               

               Cow position:
               chrX:41733608-41733856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 136
               

               Conread position:
               206-463
               

               Cow position:
               chrX:38072181-38072442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               114, 131
               

               Conread position:
               208-485
               

               Cow position:
               chrX:865980-865701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 133
               

               Conread position:
               208-486
               

               Cow position:
               chrX:323499-323219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               112, 133
Conread position:	15-476
Cow position:	chr10:4711381-4710896 (view UCSC Genome Browser custom track)
Alignm length:	493
Alignm identity:	323
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	21, 85
Conread position:	15-479
Cow position:	chr10:44765738-44765256 (view UCSC Genome Browser custom track)
Alignm length:	490
Alignm identity:	308
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	14, 72
Conread position:	16-485
Cow position:	chr10:23413107-23412617 (view UCSC Genome Browser custom track)
Alignm length:	497
Alignm identity:	317
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	20, 183
Conread position:	18-478
Cow position:	chr10:10859482-10859969 (view UCSC Genome Browser custom track)
Alignm length:	494
Alignm identity:	317
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	18, 29
Conread position:	19-479
Cow position:	chr10:6012286-6012757 (view UCSC Genome Browser custom track)
Alignm length:	478
Alignm identity:	294
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	17, 349
Conread position:	34-478
Cow position:	chr10:23648248-23648716 (view UCSC Genome Browser custom track)
Alignm length:	475
Alignm identity:	303
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	25, 167
Conread position:	34-485
Cow position:	chr10:10586165-10585691 (view UCSC Genome Browser custom track)
Alignm length:	482
Alignm identity:	314
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	28, 167
Conread position:	61-431
Cow position:	chr10:20552232-20551838 (view UCSC Genome Browser custom track)
Alignm length:	397
Alignm identity:	257
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	93, 148
Conread position:	61-485
Cow position:	chr10:32704779-32704333 (view UCSC Genome Browser custom track)
Alignm length:	452
Alignm identity:	295
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	78, 138
Conread position:	112-480
Cow position:	chr10:24743914-24743539 (view UCSC Genome Browser custom track)
Alignm length:	383
Alignm identity:	248
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	16, 44
Conread position:	153-464
Cow position:	chr10:31534344-31534026 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	211
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	42, 19
Conread position:	199-480
Cow position:	chr10:40388677-40388397 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	194
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	128, 142
Conread position:	204-454
Cow position:	chr10:31853523-31853270 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	164
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	170, 136
Conread position:	204-457
Cow position:	chr10:28775679-28775423 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	165
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	173, 0
Conread position:	204-464
Cow position:	chr10:20372579-20372840 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	169
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	106, 98
Conread position:	204-476
Cow position:	chr10:33665380-33665105 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	180
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	117, 137
Conread position:	204-477
Cow position:	chr10:24296622-24296895 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	181
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	121, 113
Conread position:	204-479
Cow position:	chr10:45484156-45484434 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	182
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	123, 137
Conread position:	204-485
Cow position:	chr10:39037200-39037480 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	188
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	116, 133
Conread position:	204-486
Cow position:	chr10:51288551-51288267 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	185
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	105, 98