Non-Coding RNA Search

Cow genome map


           Conread name:
           Thy1-THY010013H05
        

               Conread position:
               9-357
               

               Cow position:
               chr10:8996758-8996410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               228, 221
               

               Conread position:
               9-409
               

               Cow position:
               chr10:8996422-8996020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               355, 0
               

               Conread position:
               29-302
               

               Cow position:
               chr10:9010466-9010193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               29-345
               

               Cow position:
               chr10:8996318-8996002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-357
               

               Cow position:
               chr10:8996570-8996242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               195, 207
               

               Conread position:
               6-357
               

               Cow position:
               chr11:74555104-74554753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               190, 185
               

               Conread position:
               9-349
               

               Cow position:
               chr11:74554513-74554173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               9-380
               

               Cow position:
               chr11:74554597-74554224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               210, 226
               

               Conread position:
               11-357
               

               Cow position:
               chr11:74554847-74554501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               20-338
               

               Cow position:
               chr11:50368591-50368273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               106, 100
               

               Conread position:
               29-357
               

               Cow position:
               chr11:74554997-74554669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               195, 207
               

               Conread position:
               29-384
               

               Cow position:
               chr11:74554913-74554556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               167, 163
               

               Conread position:
               1-313
               

               Cow position:
               chr13:24163069-24163382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               1-393
               

               Cow position:
               chr13:22125007-22125402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 55
               

               Conread position:
               3-407
               

               Cow position:
               chr13:22124925-22125331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               12, 334
               

               Conread position:
               3-407
               

               Cow position:
               chr13:24162651-24163057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 189
               

               Conread position:
               8-362
               

               Cow position:
               chr13:22125266-22125620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               8-362
               

               Cow position:
               chr13:24162992-24163346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               11-300
               

               Cow position:
               chr13:22125354-22125643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 133
               

               Conread position:
               11-342
               

               Cow position:
               chr13:24162492-24162822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               325, 0
               

               Conread position:
               11-345
               

               Cow position:
               chr13:22125186-22125520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               108, 115
               

               Conread position:
               11-345
               

               Cow position:
               chr13:39930653-39930987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               11-382
               

               Cow position:
               chr13:22124766-22125139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               333, 325
               

               Conread position:
               11-389
               

               Cow position:
               chr13:24162912-24163292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               108, 115
               

               Conread position:
               18-339
               

               Cow position:
               chr13:24162833-24163156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               19-339
               

               Cow position:
               chr13:22125110-22125430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               214, 205
               

               Conread position:
               19-351
               

               Cow position:
               chr13:24162584-24162916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               100, 107
               

               Conread position:
               19-385
               

               Cow position:
               chr13:24163256-24163624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               258, 220
               

               Conread position:
               23-345
               

               Cow position:
               chr13:39930582-39930903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               23-388
               

               Cow position:
               chr13:22124695-22125061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               108, 5
               

               Conread position:
               23-388
               

               Cow position:
               chr13:24162421-24162787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               130, 5
               

               Conread position:
               23-389
               

               Cow position:
               chr13:22124863-22125230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               96, 5
               

               Conread position:
               28-341
               

               Cow position:
               chr13:39930840-39931151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               28-345
               

               Cow position:
               chr13:39930756-39931071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               1-242
               

               Cow position:
               chr14:663322-663080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 196
               

               Conread position:
               1-260
               

               Cow position:
               chr14:3155574-3155834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               11, 236
               

               Conread position:
               1-339
               

               Cow position:
               chr14:3061240-3060901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-345
               

               Cow position:
               chr14:3080681-3080336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 192
               

               Conread position:
               1-357
               

               Cow position:
               chr14:680220-680577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               15, 137
               

               Conread position:
               1-386
               

               Cow position:
               chr14:25896035-25896421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-388
               

               Cow position:
               chr14:3061156-3060766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               14, 137
               

               Conread position:
               1-408
               

               Cow position:
               chr14:25835960-25836370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-421
               

               Cow position:
               chr14:25836212-25836635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-421
               

               Cow position:
               chr14:25836800-25837223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               271
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               1-421
               

               Cow position:
               chr14:25895363-25895786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-307
               

               Cow position:
               chr14:663404-663099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 152
               

               Conread position:
               3-344
               

               Cow position:
               chr14:663487-663146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               159, 130
               

               Conread position:
               3-345
               

               Cow position:
               chr14:3080006-3079662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               193, 188
               

               Conread position:
               3-351
               

               Cow position:
               chr14:433809-434158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 225
               

               Conread position:
               3-357
               

               Cow position:
               chr14:433893-434248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 189
               

               Conread position:
               3-414
               

               Cow position:
               chr14:433977-434391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 150
               

               Conread position:
               8-421
               

               Cow position:
               chr14:3080338-3079922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               9-345
               

               Cow position:
               chr14:25859526-25859862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-345
               

               Cow position:
               chr14:25876577-25876913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 141
               

               Conread position:
               9-345
               

               Cow position:
               chr14:25877333-25877669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               201, 215
               

               Conread position:
               9-357
               

               Cow position:
               chr14:25860282-25860630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               201, 215
               

               Conread position:
               9-357
               

               Cow position:
               chr14:25910837-25911185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 141
               

               Conread position:
               9-362
               

               Cow position:
               chr14:25836557-25836910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-362
               

               Cow position:
               chr14:25859358-25859711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-362
               

               Cow position:
               chr14:25876493-25876846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               185, 189
               

               Conread position:
               9-363
               

               Cow position:
               chr14:25895036-25895390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-375
               

               Cow position:
               chr14:25836137-25836505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 0
               

               Conread position:
               9-378
               

               Cow position:
               chr14:25910921-25911292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               349, 0
               

               Conread position:
               9-379
               

               Cow position:
               chr14:25836473-25836845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               350, 0
               

               Conread position:
               9-379
               

               Cow position:
               chr14:25860366-25860738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 0
               

               Conread position:
               9-379
               

               Cow position:
               chr14:25895204-25895576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 0
               

               Conread position:
               9-384
               

               Cow position:
               chr14:3155415-3155792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               224, 215
               

               Conread position:
               9-393
               

               Cow position:
               chr14:25836305-25836691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               185, 189
               

               Conread position:
               9-414
               

               Cow position:
               chr14:25859694-25860101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               130, 120
               

               Conread position:
               9-414
               

               Cow position:
               chr14:25910757-25911160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               126, 33
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25836389-25836803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               338, 0
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25836641-25837055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               183, 187
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25859610-25860024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               340, 0
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25859946-25860360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25860114-25860528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 373
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25860198-25860612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               122, 137
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25876997-25877411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               357, 0
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25877165-25877579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               357, 373
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25877249-25877663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               350, 0
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25895708-25896122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 0
               

               Conread position:
               9-421
               

               Cow position:
               chr14:25895876-25896290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 215
               

               Conread position:
               9-422
               

               Cow position:
               chr14:3156072-3156487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               225, 218
               

               Conread position:
               9-425
               

               Cow position:
               chr14:25836053-25836471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               357, 0
               

               Conread position:
               9-425
               

               Cow position:
               chr14:25876829-25877247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               136, 141
               

               Conread position:
               11-334
               

               Cow position:
               chr14:434070-434393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 97
               

               Conread position:
               11-334
               

               Cow position:
               chr14:3060977-3060654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               11-334
               

               Cow position:
               chr14:3127594-3127271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               11-339
               

               Cow position:
               chr14:680735-681063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               141, 125
               

               Conread position:
               11-339
               

               Cow position:
               chr14:3061733-3061405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               217, 225
               

               Conread position:
               11-341
               

               Cow position:
               chr14:25860452-25860782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               135, 143
               

               Conread position:
               11-349
               

               Cow position:
               chr14:447933-448273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               11-357
               

               Cow position:
               chr14:3080166-3079820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               11-357
               

               Cow position:
               chr14:3080502-3080156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               11-357
               

               Cow position:
               chr14:3080586-3080240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               11-357
               

               Cow position:
               chr14:3127762-3127416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-357
               

               Cow position:
               chr14:3127846-3127500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               11-357
               

               Cow position:
               chr14:3127930-3127584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               11-357
               

               Cow position:
               chr14:3128014-3127668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               11-357
               

               Cow position:
               chr14:3128098-3127752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               11-362
               

               Cow position:
               chr14:447681-448032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               131, 136
               

               Conread position:
               11-362
               

               Cow position:
               chr14:25859444-25859795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 132
               

               Conread position:
               11-379
               

               Cow position:
               chr14:25877419-25877789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 0
               

               Conread position:
               11-379
               

               Cow position:
               chr14:25895458-25895828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 0
               

               Conread position:
               11-382
               

               Cow position:
               chr14:25877503-25877876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               244
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               135, 143
               

               Conread position:
               11-389
               

               Cow position:
               chr14:3127678-3127298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               11-389
               

               Cow position:
               chr14:25895290-25895670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 0
               

               Conread position:
               11-414
               

               Cow position:
               chr14:25895794-25896199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 139
               

               Conread position:
               11-421
               

               Cow position:
               chr14:25836727-25837139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 139
               

               Conread position:
               11-421
               

               Cow position:
               chr14:25895122-25895534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               119, 136
               

               Conread position:
               11-421
               

               Cow position:
               chr14:25895626-25896038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 0
               

               Conread position:
               11-421
               

               Cow position:
               chr14:25895962-25896374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 386
               

               Conread position:
               11-429
               

               Cow position:
               chr14:680567-680987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 51
               

               Conread position:
               12-388
               

               Cow position:
               chr14:25894955-25895333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               128, 142
               

               Conread position:
               14-362
               

               Cow position:
               chr14:680654-681002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 210
               

               Conread position:
               14-428
               

               Cow position:
               chr14:680318-680734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 322
               

               Conread position:
               16-414
               

               Cow position:
               chr14:25876330-25876732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 219
               

               Conread position:
               16-421
               

               Cow position:
               chr14:25895547-25895954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               343, 0
               

               Conread position:
               17-342
               

               Cow position:
               chr14:3061393-3061067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 122
               

               Conread position:
               19-339
               

               Cow position:
               chr14:680491-680811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-345
               

               Cow position:
               chr14:3061305-3060979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               6, 10
               

               Conread position:
               19-357
               

               Cow position:
               chr14:3155914-3156252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               217, 208
               

               Conread position:
               28-251
               

               Cow position:
               chr14:3060876-3060653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 80
               

               Conread position:
               28-262
               

               Cow position:
               chr14:434171-434408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               28-344
               

               Cow position:
               chr14:3080821-3080505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-345
               

               Cow position:
               chr14:447866-448183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               205, 196
               

               Conread position:
               28-345
               

               Cow position:
               chr14:680836-681153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-347
               

               Cow position:
               chr14:25835652-25835971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-357
               

               Cow position:
               chr14:447782-448111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               28-357
               

               Cow position:
               chr14:680920-681249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               248, 254
               

               Conread position:
               28-357
               

               Cow position:
               chr14:3061464-3061135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               164, 168
               

               Conread position:
               28-357
               

               Cow position:
               chr14:3080737-3080408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-378
               

               Cow position:
               chr14:25876428-25876780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               338, 0
               

               Conread position:
               28-379
               

               Cow position:
               chr14:3080065-3079712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               337, 0
               

               Conread position:
               28-379
               

               Cow position:
               chr14:25876932-25877285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               117, 122
               

               Conread position:
               29-334
               

               Cow position:
               chr14:3156176-3156481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               29-348
               

               Cow position:
               chr14:3155519-3155838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-357
               

               Cow position:
               chr14:3128164-3127836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               205, 195
               

               Conread position:
               29-361
               

               Cow position:
               chr14:3061043-3060710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               124, 103
               

               Conread position:
               29-384
               

               Cow position:
               chr14:3080232-3079875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 196
               

               Conread position:
               53-421
               

               Cow position:
               chr14:25859234-25859604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               255, 267
               

               Conread position:
               67-389
               

               Cow position:
               chr14:3156046-3156370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               129, 124
               

               Conread position:
               67-421
               

               Cow position:
               chr14:25894926-25895282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               299, 0
               

               Conread position:
               68-339
               

               Cow position:
               chr14:447570-447841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               165, 155
               

               Conread position:
               80-357
               

               Cow position:
               chr14:3100844-3100567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               112, 97
               

               Conread position:
               85-389
               

               Cow position:
               chr14:433808-434114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               131, 149
               

               Conread position:
               86-357
               

               Cow position:
               chr14:3061742-3061471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 68
               

               Conread position:
               86-428
               

               Cow position:
               chr14:3155408-3155752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               110, 105
               

               Conread position:
               113-428
               

               Cow position:
               chr14:3080820-3080503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 78
               

               Conread position:
               135-471
               

               Cow position:
               chr14:3061775-3061435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               227, 19
               

               Conread position:
               152-428
               

               Cow position:
               chr14:447570-447848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 39
               

               Conread position:
               3-379
               

               Cow position:
               chr15:19139073-19138694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               11-344
               

               Cow position:
               chr15:19139148-19138815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 58
               

               Conread position:
               20-311
               

               Cow position:
               chr15:48468453-48468743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               125, 113
               

               Conread position:
               80-298
               

               Cow position:
               chr15:19139162-19138945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 9
               

               Conread position:
               164-345
               

               Cow position:
               chr15:19139162-19138982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               9-345
               

               Cow position:
               chr16:14627159-14626823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               215, 228
               

               Conread position:
               3-295
               

               Cow position:
               chr17:44467523-44467816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 189
               

               Conread position:
               3-345
               

               Cow position:
               chr17:44467775-44468118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               3-345
               

               Cow position:
               chr17:44468027-44468370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               3-360
               

               Cow position:
               chr17:44467943-44468301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               9, 189
               

               Conread position:
               3-418
               

               Cow position:
               chr17:41440620-41440202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               9-340
               

               Cow position:
               chr17:22552930-22552599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               11-339
               

               Cow position:
               chr17:44467364-44467692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-345
               

               Cow position:
               chr17:44467616-44467950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               137, 141
               

               Conread position:
               11-345
               

               Cow position:
               chr17:44467700-44468034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               11-352
               

               Cow position:
               chr17:41440527-41440186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-357
               

               Cow position:
               chr17:41440779-41440433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               135, 143
               

               Conread position:
               11-362
               

               Cow position:
               chr17:41441115-41440764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               11-397
               

               Cow position:
               chr17:41440947-41440557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               14-345
               

               Cow position:
               chr17:44467451-44467782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-325
               

               Cow position:
               chr17:41440691-41440381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-306
               

               Cow position:
               chr17:41441014-41440736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               125, 119
               

               Conread position:
               28-341
               

               Cow position:
               chr17:22552323-22552010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               28-345
               

               Cow position:
               chr17:22552407-22552090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               28-384
               

               Cow position:
               chr17:41440846-41440488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               331, 0
               

               Conread position:
               29-385
               

               Cow position:
               chr17:44467886-44468244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               330, 0
               

               Conread position:
               29-388
               

               Cow position:
               chr17:22452103-22451742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               247, 253
               

               Conread position:
               68-345
               

               Cow position:
               chr17:22551863-22551586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               154, 146
               

               Conread position:
               92-342
               

               Cow position:
               chr17:41441118-41440867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 99
               

               Conread position:
               140-384
               

               Cow position:
               chr17:41441154-41440908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               6, 30
               

               Conread position:
               1-345
               

               Cow position:
               chr18:50848753-50849098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               1-350
               

               Cow position:
               chr18:42792558-42792908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 196
               

               Conread position:
               1-357
               

               Cow position:
               chr18:49032544-49032187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 236
               

               Conread position:
               1-357
               

               Cow position:
               chr18:49033300-49032943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 224
               

               Conread position:
               1-357
               

               Cow position:
               chr18:56329685-56329328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               11, 281
               

               Conread position:
               1-362
               

               Cow position:
               chr18:52012361-52011999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               1-363
               

               Cow position:
               chr18:56330021-56329658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               15, 191
               

               Conread position:
               1-393
               

               Cow position:
               chr18:56316467-56316862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-421
               

               Cow position:
               chr18:49032796-49032373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 237
               

               Conread position:
               2-378
               

               Cow position:
               chr18:52012108-52011729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               10, 274
               

               Conread position:
               3-258
               

               Cow position:
               chr18:55497285-55497030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               211, 231
               

               Conread position:
               3-334
               

               Cow position:
               chr18:56391179-56390847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               4-362
               

               Cow position:
               chr18:52447362-52447720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-357
               

               Cow position:
               chr18:55497618-55497267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               189, 185
               

               Conread position:
               8-345
               

               Cow position:
               chr18:52011934-52011596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               8-421
               

               Cow position:
               chr18:50083623-50084039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 8
               

               Conread position:
               9-243
               

               Cow position:
               chr18:56329088-56328854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               9-326
               

               Cow position:
               chr18:50282017-50282334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               186, 182
               

               Conread position:
               9-327
               

               Cow position:
               chr18:49032367-49032049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-337
               

               Cow position:
               chr18:56329424-56329096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               9-339
               

               Cow position:
               chr18:42724413-42724083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               144, 138
               

               Conread position:
               9-339
               

               Cow position:
               chr18:56329928-56329598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               9-341
               

               Cow position:
               chr18:42724581-42724249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               207, 215
               

               Conread position:
               9-341
               

               Cow position:
               chr18:55497363-55497031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               137, 145
               

               Conread position:
               9-345
               

               Cow position:
               chr18:42675314-42674978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               9-345
               

               Cow position:
               chr18:42792063-42792399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               224, 215
               

               Conread position:
               9-345
               

               Cow position:
               chr18:44398348-44398012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               9-345
               

               Cow position:
               chr18:49032451-49032115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               9-345
               

               Cow position:
               chr18:50059532-50059196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               125, 121
               

               Conread position:
               9-345
               

               Cow position:
               chr18:50281849-50282185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               9-345
               

               Cow position:
               chr18:56316308-56316644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               189, 182
               

               Conread position:
               9-360
               

               Cow position:
               chr18:49033123-49032772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               227, 222
               

               Conread position:
               9-361
               

               Cow position:
               chr18:44398180-44397828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               144, 138
               

               Conread position:
               9-362
               

               Cow position:
               chr18:42985049-42984696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               9-362
               

               Cow position:
               chr18:49032703-49032350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               227, 218
               

               Conread position:
               9-425
               

               Cow position:
               chr18:42744458-42744040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               223, 227
               

               Conread position:
               10-294
               

               Cow position:
               chr18:44397927-44397644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               142, 136
               

               Conread position:
               10-339
               

               Cow position:
               chr18:1418262-1418591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-362
               

               Cow position:
               chr18:41948920-41948568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               11-278
               

               Cow position:
               chr18:53609954-53609688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 51
               

               Conread position:
               11-312
               

               Cow position:
               chr18:56267451-56267150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               11-327
               

               Cow position:
               chr18:56329170-56328854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               225, 216
               

               Conread position:
               11-333
               

               Cow position:
               chr18:33064005-33063683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-334
               

               Cow position:
               chr18:56316646-56316969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-336
               

               Cow position:
               chr18:49021744-49022069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               226, 220
               

               Conread position:
               11-339
               

               Cow position:
               chr18:56391338-56391010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               141, 137
               

               Conread position:
               11-339
               

               Cow position:
               chr18:56391422-56391094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               142, 137
               

               Conread position:
               11-341
               

               Cow position:
               chr18:55497445-55497113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               11-343
               

               Cow position:
               chr18:47846340-47846009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               225, 203
               

               Conread position:
               11-345
               

               Cow position:
               chr18:49022823-49023157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-345
               

               Cow position:
               chr18:49032617-49032283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-345
               

               Cow position:
               chr18:49033037-49032703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               208, 225
               

               Conread position:
               11-345
               

               Cow position:
               chr18:56316226-56316560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-345
               

               Cow position:
               chr18:56316394-56316728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               180, 185
               

               Conread position:
               11-345
               

               Cow position:
               chr18:56329842-56329508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               11-351
               

               Cow position:
               chr18:49022739-49023079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               11-357
               

               Cow position:
               chr18:49032953-49032607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-357
               

               Cow position:
               chr18:49033205-49032859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               226, 216
               

               Conread position:
               11-357
               

               Cow position:
               chr18:50030973-50030628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               178, 37
               

               Conread position:
               11-357
               

               Cow position:
               chr18:51400709-51401055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               11-357
               

               Cow position:
               chr18:53635615-53635269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               11-357
               

               Cow position:
               chr18:56128214-56128560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               204, 213
               

               Conread position:
               11-357
               

               Cow position:
               chr18:56128550-56128896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               11-357
               

               Cow position:
               chr18:56329506-56329160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               103, 97
               

               Conread position:
               11-358
               

               Cow position:
               chr18:56494105-56494454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               127, 143
               

               Conread position:
               11-362
               

               Cow position:
               chr18:52012266-52011915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               125, 133
               

               Conread position:
               11-383
               

               Cow position:
               chr18:56329338-56328964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               11-385
               

               Cow position:
               chr18:41197500-41197876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               353, 0
               

               Conread position:
               12-334
               

               Cow position:
               chr18:42724242-42723920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-362
               

               Cow position:
               chr18:55497695-55497346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               183, 178
               

               Conread position:
               19-259
               

               Cow position:
               chr18:42724151-42723909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               200, 206
               

               Conread position:
               20-338
               

               Cow position:
               chr18:56391968-56391650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               106, 100
               

               Conread position:
               20-345
               

               Cow position:
               chr18:51789623-51789298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               192, 212
               

               Conread position:
               20-357
               

               Cow position:
               chr18:52447630-52447967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-357
               

               Cow position:
               chr18:52012168-52011836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               129, 5
               

               Conread position:
               28-310
               

               Cow position:
               chr18:56391237-56390956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               109, 102
               

               Conread position:
               28-312
               

               Cow position:
               chr18:22844004-22843720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 113
               

               Conread position:
               28-345
               

               Cow position:
               chr18:50281952-50282269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               179, 185
               

               Conread position:
               28-345
               

               Cow position:
               chr18:53610105-53609788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               28-345
               

               Cow position:
               chr18:53610357-53610040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               28-345
               

               Cow position:
               chr18:53635682-53635365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               28-345
               

               Cow position:
               chr18:55497512-55497195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               85, 80
               

               Conread position:
               28-345
               

               Cow position:
               chr18:56128483-56128800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               28-345
               

               Cow position:
               chr18:56316075-56316392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               167, 163
               

               Conread position:
               28-345
               

               Cow position:
               chr18:56391489-56391172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               125, 120
               

               Conread position:
               28-351
               

               Cow position:
               chr18:49021677-49022000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-357
               

               Cow position:
               chr18:49032852-49032523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               197, 209
               

               Conread position:
               28-357
               

               Cow position:
               chr18:53636018-53635689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               167, 163
               

               Conread position:
               28-357
               

               Cow position:
               chr18:56329573-56329244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               167, 163
               

               Conread position:
               28-428
               

               Cow position:
               chr18:42724478-42724076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               118, 126
               

               Conread position:
               29-266
               

               Cow position:
               chr18:50848950-50849188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               29-274
               

               Cow position:
               chr18:1418365-1418610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               235, 243
               

               Conread position:
               29-312
               

               Cow position:
               chr18:47846574-47846291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               29-324
               

               Cow position:
               chr18:53635261-53634966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               120, 134
               

               Conread position:
               29-326
               

               Cow position:
               chr18:50022376-50022079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               29-328
               

               Cow position:
               chr18:50083981-50084280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               29-333
               

               Cow position:
               chr18:56128820-56129124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-341
               

               Cow position:
               chr18:50848614-50848926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               29-341
               

               Cow position:
               chr18:53586384-53586072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-344
               

               Cow position:
               chr18:50271740-50272055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-344
               

               Cow position:
               chr18:56316580-56316895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               197, 189
               

               Conread position:
               29-345
               

               Cow position:
               chr18:41949321-41949005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               207, 198
               

               Conread position:
               29-345
               

               Cow position:
               chr18:44398076-44397760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               29-345
               

               Cow position:
               chr18:50083309-50083625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               110, 101
               

               Conread position:
               29-345
               

               Cow position:
               chr18:53610020-53609705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               29-345
               

               Cow position:
               chr18:56128400-56128716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               167, 162
               

               Conread position:
               29-347
               

               Cow position:
               chr18:55066999-55066681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-357
               

               Cow position:
               chr18:42675126-42674798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               186, 206
               

               Conread position:
               29-357
               

               Cow position:
               chr18:42744522-42744194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               197, 207
               

               Conread position:
               29-357
               

               Cow position:
               chr18:50281701-50282029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 41
               

               Conread position:
               29-357
               

               Cow position:
               chr18:52447807-52448135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               163, 169
               

               Conread position:
               29-357
               

               Cow position:
               chr18:55067083-55066755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               167, 162
               

               Conread position:
               29-360
               

               Cow position:
               chr18:49033355-49033024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               29-369
               

               Cow position:
               chr18:53635345-53635003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               208, 202
               

               Conread position:
               29-378
               

               Cow position:
               chr18:42792419-42792770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               247, 253
               

               Conread position:
               29-384
               

               Cow position:
               chr18:56267517-56267160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               196, 207
               

               Conread position:
               29-390
               

               Cow position:
               chr18:50271488-50271851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               335, 0
               

               Conread position:
               29-393
               

               Cow position:
               chr18:50083813-50084179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               204, 195
               

               Conread position:
               35-345
               

               Cow position:
               chr18:44398406-44398096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-347
               

               Cow position:
               chr18:50083735-50084047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 109
               

               Conread position:
               68-300
               

               Cow position:
               chr18:55442332-55442564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               78, 82
               

               Conread position:
               68-341
               

               Cow position:
               chr18:53636062-53635789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               159, 168
               

               Conread position:
               68-345
               

               Cow position:
               chr18:52012459-52012184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               68-347
               

               Cow position:
               chr18:50271611-50271890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               128, 123
               

               Conread position:
               68-357
               

               Cow position:
               chr18:51400514-51400803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-378
               

               Cow position:
               chr18:52012377-52012065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               150, 168
               

               Conread position:
               74-298
               

               Cow position:
               chr18:53610227-53610003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               122, 117
               

               Conread position:
               78-362
               

               Cow position:
               chr18:49022722-49023006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               80-345
               

               Cow position:
               chr18:42724594-42724329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               115, 111
               

               Conread position:
               152-390
               

               Cow position:
               chr18:49033316-49033076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               1-360
               

               Cow position:
               chr19:14940658-14941018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-389
               

               Cow position:
               chr19:14940154-14940545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               6-380
               

               Cow position:
               chr19:23614444-23614820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               213, 208
               

               Conread position:
               9-255
               

               Cow position:
               chr19:23650233-23650479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               188, 182
               

               Conread position:
               9-334
               

               Cow position:
               chr19:14940751-14941076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               9-345
               

               Cow position:
               chr19:14940499-14940835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-345
               

               Cow position:
               chr19:23650065-23650401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               44, 49
               

               Conread position:
               9-357
               

               Cow position:
               chr19:23649477-23649825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-357
               

               Cow position:
               chr19:23649729-23650077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               214, 227
               

               Conread position:
               9-384
               

               Cow position:
               chr19:23649645-23650022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               228, 222
               

               Conread position:
               10-360
               

               Cow position:
               chr19:23597121-23597471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-327
               

               Cow position:
               chr19:14960132-14959816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-345
               

               Cow position:
               chr19:23649563-23649897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               11-357
               

               Cow position:
               chr19:23649311-23649657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-357
               

               Cow position:
               chr19:23649984-23650329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               185, 179
               

               Conread position:
               14-357
               

               Cow position:
               chr19:23649902-23650245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               183, 177
               

               Conread position:
               20-421
               

               Cow position:
               chr19:23649404-23649807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               344, 0
               

               Conread position:
               28-411
               

               Cow position:
               chr19:23597055-23597439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 119
               

               Conread position:
               29-345
               

               Cow position:
               chr19:14940015-14940331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-379
               

               Cow position:
               chr21:12659416-12659797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               3-362
               

               Cow position:
               chr21:12658830-12659190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               3-364
               

               Cow position:
               chr21:12659250-12659612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               9, 189
               

               Conread position:
               3-368
               

               Cow position:
               chr21:12659670-12660038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 334
               

               Conread position:
               3-379
               

               Cow position:
               chr21:12659334-12659713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               3-392
               

               Cow position:
               chr21:12659586-12659978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               3-399
               

               Cow position:
               chr21:12659166-12659567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 334
               

               Conread position:
               3-422
               

               Cow position:
               chr21:12659082-12659503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               6-399
               

               Cow position:
               chr21:12608508-12608111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               337, 0
               

               Conread position:
               9-348
               

               Cow position:
               chr21:34222879-34222540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               316, 320
               

               Conread position:
               9-382
               

               Cow position:
               chr21:12608757-12608382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               124, 114
               

               Conread position:
               11-341
               

               Cow position:
               chr21:12608419-12608089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-345
               

               Cow position:
               chr21:12608839-12608505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               205, 195
               

               Conread position:
               11-357
               

               Cow position:
               chr21:12659007-12659353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               11-375
               

               Cow position:
               chr21:12608587-12608221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               348, 0
               

               Conread position:
               11-425
               

               Cow position:
               chr21:12659511-12659927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 0
               

               Conread position:
               13-389
               

               Cow position:
               chr21:12658925-12659303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               21-326
               

               Cow position:
               chr21:12608243-12607936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               9, 253
               

               Conread position:
               28-341
               

               Cow position:
               chr21:12608654-12608341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-388
               

               Cow position:
               chr21:34222943-34222582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               41-345
               

               Cow position:
               chr21:12608305-12608001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-345
               

               Cow position:
               chr21:12658829-12659089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               148, 139
               

               Conread position:
               142-362
               

               Cow position:
               chr21:12658802-12659022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-357
               

               Cow position:
               chr22:11641022-11641379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               9-345
               

               Cow position:
               chr22:11641115-11641452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               213, 227
               

               Conread position:
               9-360
               

               Cow position:
               chr22:12399335-12398984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               125, 120
               

               Conread position:
               9-362
               

               Cow position:
               chr22:11640779-11641132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-362
               

               Cow position:
               chr22:11640947-11641300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-345
               

               Cow position:
               chr22:12399838-12399503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               224, 217
               

               Conread position:
               11-345
               

               Cow position:
               chr22:11701360-11701694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               208, 225
               

               Conread position:
               11-345
               

               Cow position:
               chr22:12418936-12418602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               11-385
               

               Cow position:
               chr22:11701192-11701568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               12-345
               

               Cow position:
               chr22:12431396-12431063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               225, 213
               

               Conread position:
               17-261
               

               Cow position:
               chr22:12418680-12418434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 212
               

               Conread position:
               28-357
               

               Cow position:
               chr22:12418835-12418506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-341
               

               Cow position:
               chr22:12476028-12475716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               208, 188
               

               Conread position:
               29-362
               

               Cow position:
               chr22:11701126-11701459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 109
               

               Conread position:
               67-341
               

               Cow position:
               chr22:12499269-12499543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               170, 150
               

               Conread position:
               68-362
               

               Cow position:
               chr22:11701333-11701627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               1-345
               

               Cow position:
               chr23:24639716-24640061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               9-260
               

               Cow position:
               chr23:24535704-24535453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-265
               

               Cow position:
               chr23:24560381-24560125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               228, 215
               

               Conread position:
               9-333
               

               Cow position:
               chr23:25660408-25660732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               214, 207
               

               Conread position:
               9-335
               

               Cow position:
               chr23:25724038-25723712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               228, 214
               

               Conread position:
               9-347
               

               Cow position:
               chr23:25626620-25626958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               217, 204
               

               Conread position:
               9-357
               

               Cow position:
               chr23:24547073-24546725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-357
               

               Cow position:
               chr23:24547157-24546809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-357
               

               Cow position:
               chr23:24639557-24639905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               9-362
               

               Cow position:
               chr23:24547241-24546888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-388
               

               Cow position:
               chr23:24560717-24560336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               228, 221
               

               Conread position:
               10-333
               

               Cow position:
               chr23:24535787-24535464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               227, 214
               

               Conread position:
               10-408
               

               Cow position:
               chr23:24626315-24626714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               343, 9
               

               Conread position:
               20-357
               

               Cow position:
               chr23:25660251-25660588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-341
               

               Cow position:
               chr23:24560614-24560301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-388
               

               Cow position:
               chr23:24639532-24639854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               164, 169
               

               Conread position:
               9-263
               

               Cow position:
               chr24:17077753-17077499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               143, 137
               

               Conread position:
               9-345
               

               Cow position:
               chr24:17035534-17035198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-345
               

               Cow position:
               chr24:17036122-17035786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               295, 290
               

               Conread position:
               9-357
               

               Cow position:
               chr24:17035450-17035102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-334
               

               Cow position:
               chr24:17077835-17077512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               213, 225
               

               Conread position:
               29-348
               

               Cow position:
               chr24:17070735-17071054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               165, 169
               

               Conread position:
               29-357
               

               Cow position:
               chr24:17078069-17077741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr25:33157058-33156792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 237
               

               Conread position:
               1-278
               

               Cow position:
               chr25:36844625-36844347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-357
               

               Cow position:
               chr25:33127797-33128154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               1-357
               

               Cow position:
               chr25:34769793-34769436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 236
               

               Conread position:
               3-241
               

               Cow position:
               chr25:4657300-4657061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 195
               

               Conread position:
               3-303
               

               Cow position:
               chr25:25652605-25652906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               3-312
               

               Cow position:
               chr25:3636397-3636087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               3-313
               

               Cow position:
               chr25:34473756-34474064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               3-328
               

               Cow position:
               chr25:25652521-25652847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 189
               

               Conread position:
               3-334
               

               Cow position:
               chr25:3664180-3664512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               3-337
               

               Cow position:
               chr25:3676073-3676408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 189
               

               Conread position:
               3-339
               

               Cow position:
               chr25:3664012-3664349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-345
               

               Cow position:
               chr25:3664096-3664439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-345
               

               Cow position:
               chr25:25652353-25652696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               3-357
               

               Cow position:
               chr25:25652773-25653128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               9, 132
               

               Conread position:
               3-362
               

               Cow position:
               chr25:25652437-25652797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               6-344
               

               Cow position:
               chr25:33298564-33298902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               130, 138
               

               Conread position:
               6-345
               

               Cow position:
               chr25:33298984-33299323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               7-313
               

               Cow position:
               chr25:4657464-4657157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               7-327
               

               Cow position:
               chr25:326499-326819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-389
               

               Cow position:
               chr25:25652862-25653246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               230, 217
               

               Conread position:
               9-258
               

               Cow position:
               chr25:427333-427582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-262
               

               Cow position:
               chr25:33127974-33128227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-269
               

               Cow position:
               chr25:22235917-22236177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               9-341
               

               Cow position:
               chr25:34447278-34447610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-345
               

               Cow position:
               chr25:33157301-33156965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               9-345
               

               Cow position:
               chr25:34769952-34769616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-347
               

               Cow position:
               chr25:34447110-34447448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               226, 218
               

               Conread position:
               9-349
               

               Cow position:
               chr25:22236001-22236341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               9-354
               

               Cow position:
               chr25:33157133-33156788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               215, 227
               

               Conread position:
               9-357
               

               Cow position:
               chr25:23420387-23420735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               215, 227
               

               Conread position:
               9-357
               

               Cow position:
               chr25:33298651-33298999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               187, 183
               

               Conread position:
               9-357
               

               Cow position:
               chr25:34769700-34769352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               228, 221
               

               Conread position:
               9-421
               

               Cow position:
               chr25:33157385-33156971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               10-269
               

               Cow position:
               chr25:34763167-34763426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-328
               

               Cow position:
               chr25:34762834-34763149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               227, 214
               

               Conread position:
               10-345
               

               Cow position:
               chr25:33298904-33299239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               10-345
               

               Cow position:
               chr25:34732603-34732268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               294, 286
               

               Conread position:
               11-252
               

               Cow position:
               chr25:3664357-3664598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-313
               

               Cow position:
               chr25:4657375-4657073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               11-313
               

               Cow position:
               chr25:25652950-25653252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               180, 185
               

               Conread position:
               11-313
               

               Cow position:
               chr25:33530235-33530537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               11-334
               

               Cow position:
               chr25:33529104-33529427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-335
               

               Cow position:
               chr25:25653034-25653358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               11-341
               

               Cow position:
               chr25:34447196-34447526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               185, 180
               

               Conread position:
               11-345
               

               Cow position:
               chr25:3636472-3636138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               227, 219
               

               Conread position:
               11-345
               

               Cow position:
               chr25:3636556-3636222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 110
               

               Conread position:
               11-345
               

               Cow position:
               chr25:33157467-33157133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               225, 213
               

               Conread position:
               11-345
               

               Cow position:
               chr25:34763336-34763667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 51
               

               Conread position:
               11-347
               

               Cow position:
               chr25:33157215-33156879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               250, 283
               

               Conread position:
               11-357
               

               Cow position:
               chr25:25652194-25652540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               141, 129
               

               Conread position:
               11-357
               

               Cow position:
               chr25:34447028-34447374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-425
               

               Cow position:
               chr25:25652278-25652694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 18
               

               Conread position:
               12-341
               

               Cow position:
               chr25:33127725-33128054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               224, 218
               

               Conread position:
               12-357
               

               Cow position:
               chr25:3663938-3664283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-334
               

               Cow position:
               chr25:34763422-34763740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               220, 35
               

               Conread position:
               15-345
               

               Cow position:
               chr25:34733999-34733669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 15
               

               Conread position:
               17-315
               

               Cow position:
               chr25:33529026-33529324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-298
               

               Cow position:
               chr25:33506771-33507041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 109
               

               Conread position:
               28-339
               

               Cow position:
               chr25:3636287-3635976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               28-339
               

               Cow position:
               chr25:3676015-3676326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               120, 126
               

               Conread position:
               28-339
               

               Cow position:
               chr25:25652715-25653026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-339
               

               Cow position:
               chr25:33530336-33530647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               125, 120
               

               Conread position:
               28-379
               

               Cow position:
               chr25:34473530-34473880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               122, 96
               

               Conread position:
               29-300
               

               Cow position:
               chr25:33506856-33507127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               124, 118
               

               Conread position:
               29-312
               

               Cow position:
               chr25:33530505-33530788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-341
               

               Cow position:
               chr25:23420323-23420635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               195, 207
               

               Conread position:
               29-341
               

               Cow position:
               chr25:34770016-34769704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-343
               

               Cow position:
               chr25:3664291-3664604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               29-350
               

               Cow position:
               chr25:23420491-23420812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               29-382
               

               Cow position:
               chr25:34769848-34769493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               185, 199
               

               Conread position:
               29-421
               

               Cow position:
               chr25:33157532-33157139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               40-384
               

               Cow position:
               chr25:33127669-33128015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               56-357
               

               Cow position:
               chr25:36844653-36844352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               109, 102
               

               Conread position:
               68-357
               

               Cow position:
               chr25:22235892-22236181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               165, 156
               

               Conread position:
               68-357
               

               Cow position:
               chr25:34770145-34769856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-362
               

               Cow position:
               chr25:34763141-34763435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               165, 157
               

               Conread position:
               82-357
               

               Cow position:
               chr25:34732615-34732340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 149
               

               Conread position:
               84-345
               

               Cow position:
               chr25:3663926-3664187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               197, 192
               

               Conread position:
               84-345
               

               Cow position:
               chr25:3675987-3676248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               88-421
               

               Cow position:
               chr25:22235827-22236163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 308
               

               Conread position:
               89-357
               

               Cow position:
               chr25:25652188-25652456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 63
               

               Conread position:
               92-361
               

               Cow position:
               chr25:4657462-4657193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 132
               

               Conread position:
               172-357
               

               Cow position:
               chr25:25652187-25652372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr28:33210391-33210617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-414
               

               Cow position:
               chr28:34696159-34696575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 157
               

               Conread position:
               9-345
               

               Cow position:
               chr28:9253275-9253611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               225, 221
               

               Conread position:
               9-357
               

               Cow position:
               chr28:9253191-9253539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-357
               

               Cow position:
               chr28:33210232-33210581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               227, 216
               

               Conread position:
               11-251
               

               Cow position:
               chr28:34696338-34696578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               11-334
               

               Cow position:
               chr28:34696254-34696577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               11-402
               

               Cow position:
               chr28:34695918-34696311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               348, 0
               

               Conread position:
               11-421
               

               Cow position:
               chr28:34696002-34696414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 64
               

               Conread position:
               11-421
               

               Cow position:
               chr28:34696086-34696498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 228
               

               Conread position:
               12-335
               

               Cow position:
               chr28:33210319-33210643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               224, 218
               

               Conread position:
               28-428
               

               Cow position:
               chr28:34695851-34696253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               192, 186
               

               Conread position:
               98-421
               

               Cow position:
               chr28:34695837-34696162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               1-387
               

               Cow position:
               chr6:49340735-49341124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-414
               

               Cow position:
               chr6:49396288-49396704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               3-357
               

               Cow position:
               chr6:49428729-49429084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               3-362
               

               Cow position:
               chr6:49428561-49428921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-391
               

               Cow position:
               chr6:49428477-49428868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-428
               

               Cow position:
               chr6:49428981-49429409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 148
               

               Conread position:
               6-422
               

               Cow position:
               chr6:49396546-49396964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 0
               

               Conread position:
               7-421
               

               Cow position:
               chr6:49395881-49396291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               350, 0
               

               Conread position:
               9-295
               

               Cow position:
               chr6:49362343-49362629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               9-341
               

               Cow position:
               chr6:49340576-49340908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-414
               

               Cow position:
               chr6:49396135-49396536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               186, 95
               

               Conread position:
               9-421
               

               Cow position:
               chr6:49396381-49396795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               350, 0
               

               Conread position:
               10-421
               

               Cow position:
               chr6:49396466-49396879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               271
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               182, 187
               

               Conread position:
               11-362
               

               Cow position:
               chr6:49428906-49429257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 186
               

               Conread position:
               11-375
               

               Cow position:
               chr6:49362273-49362627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               310, 60
               

               Conread position:
               11-379
               

               Cow position:
               chr6:49428318-49428688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 325
               

               Conread position:
               11-379
               

               Cow position:
               chr6:49428402-49428772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 139
               

               Conread position:
               11-421
               

               Cow position:
               chr6:49428654-49429066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 141
               

               Conread position:
               11-421
               

               Cow position:
               chr6:49429074-49429486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 0
               

               Conread position:
               11-528
               

               Cow position:
               chr6:49429158-49429676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               398, 480
               

               Conread position:
               28-379
               

               Cow position:
               chr6:49428251-49428604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               331, 0
               

               Conread position:
               28-408
               

               Cow position:
               chr6:49428839-49429221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 0
               

               Conread position:
               28-421
               

               Cow position:
               chr6:49396232-49396627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 0
               

               Conread position:
               29-388
               

               Cow position:
               chr6:49340848-49341209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               330, 0
               

               Conread position:
               92-389
               

               Cow position:
               chr6:49428231-49428530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 59
               

               Conread position:
               134-379
               

               Cow position:
               chr6:49428182-49428436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-341
               

               Cow position:
               chr7:42878861-42878520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 198
               

               Conread position:
               9-345
               

               Cow position:
               chr7:42878768-42878432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               9-357
               

               Cow position:
               chr7:3180289-3180637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               215, 223
               

               Conread position:
               11-306
               

               Cow position:
               chr7:12293438-12293733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               141, 135
               

               Conread position:
               11-312
               

               Cow position:
               chr7:18390420-18390721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               19-344
               

               Cow position:
               chr7:28846437-28846762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               127, 133
               

               Conread position:
               29-222
               

               Cow position:
               chr7:12293792-12293985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               117, 122
               

               Conread position:
               29-300
               

               Cow position:
               chr7:12293708-12293979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 122
               

               Conread position:
               29-339
               

               Cow position:
               chr7:42878664-42878354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               208, 203
               

               Conread position:
               29-345
               

               Cow position:
               chr7:18390354-18390670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               255, 239
               

               Conread position:
               9-333
               

               Cow position:
               chr8:45201610-45201934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               226, 215
               

               Conread position:
               9-357
               

               Cow position:
               chr8:45201526-45201874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               306, 312
               

               Conread position:
               9-357
               

               Cow position:
               chr8:46816805-46817153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               130, 121
               

               Conread position:
               9-357
               

               Cow position:
               chr8:55581078-55581426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               9-421
               

               Cow position:
               chr8:55580910-55581324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 21
               

               Conread position:
               11-341
               

               Cow position:
               chr8:55580996-55581326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               29-357
               

               Cow position:
               chr8:55580846-55581174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               124, 119
               

               Conread position:
               29-408
               

               Cow position:
               chr8:45201294-45201675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               102, 110
               

               Conread position:
               1-263
               

               Cow position:
               chrX:14181227-14180964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 224
               

               Conread position:
               1-357
               

               Cow position:
               chrX:13826701-13826344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 191
               

               Conread position:
               2-324
               

               Cow position:
               chrX:13826868-13826545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 64
               

               Conread position:
               9-326
               

               Cow position:
               chrX:25324743-25324426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               266, 273
               

               Conread position:
               9-345
               

               Cow position:
               chrX:25324911-25324575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-295
               

               Cow position:
               chrX:14181384-14181100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 19
               

               Conread position:
               11-306
               

               Cow position:
               chrX:13826522-13826227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               11-334
               

               Cow position:
               chrX:13826606-13826283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               103, 97
               

               Conread position:
               20-389
               

               Cow position:
               chrX:14181543-14181172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               120, 109
               

               Conread position:
               29-378
               

               Cow position:
               chrX:25325227-25324876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               162, 167
               

               Conread position:
               68-339
               

               Cow position:
               chrX:14181411-14181140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 64
Conread position:	9-357
Cow position:	chr10:8996758-8996410 (view UCSC Genome Browser custom track)
Alignm length:	350
Alignm identity:	215
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	228, 221
Conread position:	9-409
Cow position:	chr10:8996422-8996020 (view UCSC Genome Browser custom track)
Alignm length:	403
Alignm identity:	241
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	355, 0
Conread position:	29-302
Cow position:	chr10:9010466-9010193 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	181
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	37, 33
Conread position:	29-345
Cow position:	chr10:8996318-8996002 (view UCSC Genome Browser custom track)
Alignm length:	317
Alignm identity:	200
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	0, 0
Conread position:	29-357
Cow position:	chr10:8996570-8996242 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	203
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	195, 207
Conread position:	6-357
Cow position:	chr11:74555104-74554753 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	217
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	190, 185
Conread position:	9-349
Cow position:	chr11:74554513-74554173 (view UCSC Genome Browser custom track)
Alignm length:	344
Alignm identity:	221
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	15, 20
Conread position:	9-380
Cow position:	chr11:74554597-74554224 (view UCSC Genome Browser custom track)
Alignm length:	375
Alignm identity:	237
Alignm E-value:	6e-34
Alignm gaps (pig, cow):	210, 226
Conread position:	11-357
Cow position:	chr11:74554847-74554501 (view UCSC Genome Browser custom track)
Alignm length:	349
Alignm identity:	229
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	185, 180
Conread position:	20-338
Cow position:	chr11:50368591-50368273 (view UCSC Genome Browser custom track)
Alignm length:	322
Alignm identity:	210
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	106, 100
Conread position:	29-384
Cow position:	chr11:74554913-74554556 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	221
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	167, 163
Conread position:	1-313
Cow position:	chr13:24163069-24163382 (view UCSC Genome Browser custom track)
Alignm length:	315
Alignm identity:	198
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	15, 144
Conread position:	1-393
Cow position:	chr13:22125007-22125402 (view UCSC Genome Browser custom track)
Alignm length:	399
Alignm identity:	242
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	11, 55
Conread position:	3-407
Cow position:	chr13:22124925-22125331 (view UCSC Genome Browser custom track)
Alignm length:	409
Alignm identity:	255
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	12, 334
Conread position:	8-362
Cow position:	chr13:22125266-22125620 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	231
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	26, 9
Conread position:	11-300
Cow position:	chr13:22125354-22125643 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	181
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	124, 133
Conread position:	11-342
Cow position:	chr13:24162492-24162822 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	211
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	325, 0
Conread position:	11-345
Cow position:	chr13:22125186-22125520 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	206
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	108, 115
Conread position:	11-382
Cow position:	chr13:22124766-22125139 (view UCSC Genome Browser custom track)
Alignm length:	375
Alignm identity:	234
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	333, 325
Conread position:	11-389
Cow position:	chr13:24162912-24163292 (view UCSC Genome Browser custom track)
Alignm length:	382
Alignm identity:	231
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	108, 115