Cow genome map
| Conread name: | Thy1-THY010041A07 |
| Conread position: | 151-420 |
| Cow position: | chr1:91729433-91729173 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 162-443 |
| Cow position: | chr1:52141960-52141676 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 71 |
| Conread position: | 163-501 |
| Cow position: | chr1:81000859-81000537 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 166-423 |
| Cow position: | chr1:99217758-99218015 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 81 |
| Conread position: | 170-474 |
| Cow position: | chr1:85747034-85747333 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 191-434 |
| Cow position: | chr1:2475737-2475494 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 168, 143 |
| Conread position: | 226-427 |
| Cow position: | chr1:41289209-41289012 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 283-453 |
| Cow position: | chr1:33493912-33494080 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 306-474 |
| Cow position: | chr1:4381291-4381461 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 147 |
| Conread position: | 154-506 |
| Cow position: | chr10:2348547-2348908 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 8 |
| Conread position: | 161-443 |
| Cow position: | chr10:11445432-11445146 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 49 |
| Conread position: | 164-427 |
| Cow position: | chr10:33882005-33882256 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 171-501 |
| Cow position: | chr10:49554342-49554018 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 90 |
| Conread position: | 227-428 |
| Cow position: | chr10:26686192-26686389 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 134-443 |
| Cow position: | chr12:47532775-47533086 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 115, 29 |
| Conread position: | 162-428 |
| Cow position: | chr12:46932524-46932261 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 48, 182 |
| Conread position: | 164-423 |
| Cow position: | chr12:12955421-12955173 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 134 |
| Conread position: | 166-478 |
| Cow position: | chr12:6973824-6973522 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 112 |
| Conread position: | 179-428 |
| Cow position: | chr12:37883851-37883611 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 275-474 |
| Cow position: | chr12:34596726-34596528 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 158-501 |
| Cow position: | chr13:14527973-14527643 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 162-428 |
| Cow position: | chr13:33627647-33627905 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 201, 91 |
| Conread position: | 163-428 |
| Cow position: | chr13:20296994-20296732 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 163-428 |
| Cow position: | chr13:31841969-31841722 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 190, 75 |
| Conread position: | 166-474 |
| Cow position: | chr13:48964138-48964437 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 117 |
| Conread position: | 182-428 |
| Cow position: | chr13:44586131-44586369 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 172, 20 |
| Conread position: | 224-519 |
| Cow position: | chr13:37817968-37818246 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 278-428 |
| Cow position: | chr13:57080821-57080976 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 283-469 |
| Cow position: | chr13:14176899-14176718 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 54 |
| Conread position: | 288-428 |
| Cow position: | chr13:51789119-51788974 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 325-428 |
| Cow position: | chr13:14122297-14122194 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 327-426 |
| Cow position: | chr13:34586085-34585985 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 143-512 |
| Cow position: | chr14:25704507-25704138 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 150-474 |
| Cow position: | chr14:37201627-37201307 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 161-430 |
| Cow position: | chr14:34216197-34216461 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 196 |
| Conread position: | 163-434 |
| Cow position: | chr14:13831747-13832011 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 129 |
| Conread position: | 163-501 |
| Cow position: | chr14:6909330-6909661 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 90 |
| Conread position: | 166-428 |
| Cow position: | chr14:28167023-28167281 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 83, 74 |
| Conread position: | 167-426 |
| Cow position: | chr14:23030881-23030630 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 161 |
| Conread position: | 168-428 |
| Cow position: | chr14:35327428-35327159 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 161, 100 |
| Conread position: | 171-501 |
| Cow position: | chr14:26057047-26057393 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 18, 284 |
| Conread position: | 259-503 |
| Cow position: | chr14:27832819-27832586 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 33 |
| Conread position: | 156-471 |
| Cow position: | chr15:26444485-26444791 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 91 |
| Conread position: | 178-428 |
| Cow position: | chr15:51407150-51406893 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 83, 178 |
| Conread position: | 235-501 |
| Cow position: | chr15:14832251-14831997 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 118, 83 |
| Conread position: | 254-423 |
| Cow position: | chr15:23933312-23933480 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 333-429 |
| Cow position: | chr15:10396573-10396475 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 132-474 |
| Cow position: | chr16:15482995-15483334 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 163-428 |
| Cow position: | chr16:40884947-40884686 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 145, 126 |
| Conread position: | 164-417 |
| Cow position: | chr16:22607106-22606851 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 227-429 |
| Cow position: | chr16:10833213-10833019 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 135-428 |
| Cow position: | chr17:40071294-40071007 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 222, 7 |
| Conread position: | 302-435 |
| Cow position: | chr17:14918980-14919113 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 160-423 |
| Cow position: | chr18:17816320-17816061 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 165-443 |
| Cow position: | chr18:14718536-14718268 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 90 |
| Conread position: | 225-501 |
| Cow position: | chr18:35344961-35344708 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 134, 20 |
| Conread position: | 226-471 |
| Cow position: | chr18:16447468-16447223 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 27, 230 |
| Conread position: | 290-515 |
| Cow position: | chr18:3333003-3333217 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 68, 141 |
| Conread position: | 300-428 |
| Cow position: | chr18:48528964-48528843 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 159-391 |
| Cow position: | chr19:2863388-2863626 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 162-501 |
| Cow position: | chr19:18282414-18282091 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 97, 118 |
| Conread position: | 215-514 |
| Cow position: | chr19:21548204-21548492 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 138, 38 |
| Conread position: | 156-391 |
| Cow position: | chr2:64104125-64104361 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 211 |
| Conread position: | 156-391 |
| Cow position: | chr2:67747747-67747968 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 160-428 |
| Cow position: | chr2:62139145-62138885 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 116 |
| Conread position: | 161-474 |
| Cow position: | chr2:36881670-36881364 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 25 |
| Conread position: | 163-423 |
| Cow position: | chr2:51552567-51552313 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 155 |
| Conread position: | 163-428 |
| Cow position: | chr2:5075597-5075334 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 163-428 |
| Cow position: | chr2:80427843-80428112 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 198 |
| Conread position: | 163-500 |
| Cow position: | chr2:76016713-76017050 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 125, 64 |
| Conread position: | 165-428 |
| Cow position: | chr2:14513974-14514243 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 269-428 |
| Cow position: | chr2:84473975-84473817 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 291-474 |
| Cow position: | chr2:17546554-17546729 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 298-428 |
| Cow position: | chr2:61964352-61964224 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 354-505 |
| Cow position: | chr2:39196175-39196027 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 106, 76 |
| Conread position: | 153-427 |
| Cow position: | chr20:8214152-8213885 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 120 |
| Conread position: | 247-474 |
| Cow position: | chr20:6129223-6129003 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 288-499 |
| Cow position: | chr20:1627830-1627626 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 88, 61 |
| Conread position: | 145-426 |
| Cow position: | chr21:28157925-28158192 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 225, 59 |
| Conread position: | 158-380 |
| Cow position: | chr21:37197507-37197286 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 164-439 |
| Cow position: | chr21:37367807-37367536 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 172-426 |
| Cow position: | chr21:448230-448481 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 263-431 |
| Cow position: | chr21:46891353-46891521 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 148-428 |
| Cow position: | chr22:44237871-44237595 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 243, 109 |
| Conread position: | 162-477 |
| Cow position: | chr22:11704358-11704051 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 118 |
| Conread position: | 150-478 |
| Cow position: | chr23:28595579-28595898 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 103 |
| Conread position: | 163-472 |
| Cow position: | chr23:40852880-40853204 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 9, 233 |
| Conread position: | 173-428 |
| Cow position: | chr23:26683243-26682988 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 248-428 |
| Cow position: | chr23:37458589-37458401 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 304-479 |
| Cow position: | chr23:14614370-14614545 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 328-441 |
| Cow position: | chr23:29754656-29754768 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 151-471 |
| Cow position: | chr24:806358-806040 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 183 |
| Conread position: | 156-505 |
| Cow position: | chr24:14708448-14708118 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 97 |
| Conread position: | 162-428 |
| Cow position: | chr24:26396200-26395932 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 165 |
| Conread position: | 163-474 |
| Cow position: | chr24:17859720-17860022 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 111 |
| Conread position: | 164-476 |
| Cow position: | chr24:35362126-35361816 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 165 |
| Conread position: | 250-426 |
| Cow position: | chr25:28895741-28895911 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 151-427 |
| Cow position: | chr26:20520411-20520687 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 225-428 |
| Cow position: | chr26:7900533-7900340 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 225-508 |
| Cow position: | chr26:19500479-19500759 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 301-494 |
| Cow position: | chr26:5549402-5549213 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 153-501 |
| Cow position: | chr27:20560016-20559665 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 128 |
| Conread position: | 176-417 |
| Cow position: | chr27:23266492-23266248 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 195-425 |
| Cow position: | chr27:10118277-10118042 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 142, 131 |
| Conread position: | 147-415 |
| Cow position: | chr28:23167607-23167338 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 9 |
| Conread position: | 162-451 |
| Cow position: | chr28:14622423-14622135 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 85 |
| Conread position: | 180-428 |
| Cow position: | chr29:33851092-33851333 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 174, 75 |
| Conread position: | 353-504 |
| Cow position: | chr29:36386292-36386145 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 158-427 |
| Cow position: | chr3:72592644-72592902 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 163-428 |
| Cow position: | chr3:14811562-14811310 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 270-496 |
| Cow position: | chr3:57879046-57879272 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 89, 21 |
| Conread position: | 270-501 |
| Cow position: | chr3:61382920-61382699 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 149, 88 |
| Conread position: | 146-474 |
| Cow position: | chr4:33529103-33529423 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 142, 9 |
| Conread position: | 163-428 |
| Cow position: | chr4:23504337-23504590 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 164-432 |
| Cow position: | chr4:54037022-54036764 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 166-545 |
| Cow position: | chr4:25748323-25748685 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 225-512 |
| Cow position: | chr4:39842195-39842482 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 102 |
| Conread position: | 335-428 |
| Cow position: | chr4:28121947-28121854 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 183-428 |
| Cow position: | chr5:25398643-25398887 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 13 |
| Conread position: | 225-428 |
| Cow position: | chr5:20910566-20910771 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 113, 28 |
| Conread position: | 225-433 |
| Cow position: | chr5:4138222-4138025 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 132, 72 |
| Conread position: | 229-478 |
| Cow position: | chr5:74587151-74587389 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 161-430 |
| Cow position: | chr6:18574412-18574152 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 177 |
| Conread position: | 271-516 |
| Cow position: | chr6:28995405-28995631 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 272-474 |
| Cow position: | chr6:17726056-17725857 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 55 |
| Conread position: | 162-502 |
| Cow position: | chr7:31622529-31622842 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 170-427 |
| Cow position: | chr7:53161502-53161749 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 166, 51 |
| Conread position: | 329-474 |
| Cow position: | chr7:18417265-18417121 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 112 |
| Conread position: | 153-470 |
| Cow position: | chr8:30428065-30428373 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 154-428 |
| Cow position: | chr8:19111446-19111714 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 125, 148 |
| Conread position: | 155-391 |
| Cow position: | chr8:8682112-8682340 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 196, 89 |
| Conread position: | 230-428 |
| Cow position: | chr8:32841323-32841130 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 296-501 |
| Cow position: | chr8:2386866-2386656 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 31 |
| Conread position: | 154-417 |
| Cow position: | chr9:38433028-38433298 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 102 |
| Conread position: | 161-428 |
| Cow position: | chr9:33278934-33278672 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 93 |
| Conread position: | 163-428 |
| Cow position: | chr9:27724812-27725074 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 256, 80 |
| Conread position: | 172-428 |
| Cow position: | chr9:32953573-32953830 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 280-428 |
| Cow position: | chr9:50609853-50609695 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 293-428 |
| Cow position: | chr9:55344922-55344780 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 156-356 |
| Cow position: | chrX:42265533-42265720 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 162-456 |
| Cow position: | chrX:40472767-40473061 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 116, 183 |
| Conread position: | 163-504 |
| Cow position: | chrX:25487268-25487590 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 84 |
| Conread position: | 164-504 |
| Cow position: | chrX:11791360-11791690 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 166-478 |
| Cow position: | chrX:37148753-37148455 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 225-504 |
| Cow position: | chrX:4412154-4411896 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 249-417 |
| Cow position: | chrX:23445035-23445204 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 90, 31 |