Cow genome map
| Conread name: | Thy1-THY010056G11 |
| Conread position: | 19-222 |
| Cow position: | chr1:39068893-39068700 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 43-245 |
| Cow position: | chr1:67918847-67919053 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 65-221 |
| Cow position: | chr1:49299735-49299898 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 73-218 |
| Cow position: | chr1:45478781-45478637 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 73-256 |
| Cow position: | chr1:69264890-69265073 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 78-228 |
| Cow position: | chr1:61030843-61031005 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 78-228 |
| Cow position: | chr1:95153309-95153462 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 79-228 |
| Cow position: | chr1:78690305-78690451 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 79-242 |
| Cow position: | chr1:57297578-57297740 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 82-223 |
| Cow position: | chr1:6782106-6782245 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 83-227 |
| Cow position: | chr1:78067977-78067834 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 96-238 |
| Cow position: | chr1:88971387-88971528 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 100-226 |
| Cow position: | chr1:60478602-60478477 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 35 |
| Conread position: | 103-241 |
| Cow position: | chr1:98493586-98493449 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 117 |
| Conread position: | 110-218 |
| Cow position: | chr1:80305713-80305603 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 125-224 |
| Cow position: | chr1:54732342-54732243 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 137-226 |
| Cow position: | chr1:45680394-45680482 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 73-217 |
| Cow position: | chr10:56180616-56180761 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 73-223 |
| Cow position: | chr10:68009960-68009809 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 65 |
| Conread position: | 78-201 |
| Cow position: | chr10:58285749-58285627 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 79-221 |
| Cow position: | chr10:43509058-43509199 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 79-228 |
| Cow position: | chr10:22810999-22810848 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 79-228 |
| Cow position: | chr10:50015939-50015786 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 79-242 |
| Cow position: | chr10:4198043-4198206 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 82-228 |
| Cow position: | chr10:40563444-40563596 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 113-227 |
| Cow position: | chr10:11397089-11396975 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 86, 95 |
| Conread position: | 50-233 |
| Cow position: | chr11:19788175-19788355 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 67-227 |
| Cow position: | chr11:32782842-32782679 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 73-225 |
| Cow position: | chr11:6024526-6024368 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 78-184 |
| Cow position: | chr11:62778505-62778616 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 78-219 |
| Cow position: | chr11:4652909-4652760 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 79-207 |
| Cow position: | chr11:58990557-58990686 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 79-212 |
| Cow position: | chr11:377577-377440 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 79-216 |
| Cow position: | chr11:80596402-80596539 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 79-225 |
| Cow position: | chr11:17321715-17321860 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 120, 37 |
| Conread position: | 79-231 |
| Cow position: | chr11:52415497-52415648 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 82-223 |
| Cow position: | chr11:2900663-2900522 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 96-214 |
| Cow position: | chr11:44234437-44234557 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 105-201 |
| Cow position: | chr11:688779-688681 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 105-222 |
| Cow position: | chr11:59916241-59916359 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 110-218 |
| Cow position: | chr11:40572975-40572864 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 110-226 |
| Cow position: | chr11:70745422-70745304 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 112-234 |
| Cow position: | chr11:64932246-64932123 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 116-223 |
| Cow position: | chr11:51743204-51743313 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 124-226 |
| Cow position: | chr11:62230279-62230381 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 83 |
| Conread position: | 23-235 |
| Cow position: | chr12:7514836-7515060 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 78-242 |
| Cow position: | chr12:5543753-5543578 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 86-226 |
| Cow position: | chr12:34473574-34473436 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 87-228 |
| Cow position: | chr12:43551180-43551041 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 110-225 |
| Cow position: | chr12:45712926-45712809 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 111-217 |
| Cow position: | chr12:44516933-44516825 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 73-224 |
| Cow position: | chr13:20531565-20531718 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 73-224 |
| Cow position: | chr13:54689450-54689301 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 79-222 |
| Cow position: | chr13:8609644-8609789 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 131 |
| Conread position: | 80-215 |
| Cow position: | chr13:51227838-51227981 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 82-218 |
| Cow position: | chr13:52880965-52881100 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 117, 30 |
| Conread position: | 90-241 |
| Cow position: | chr13:11532581-11532422 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 90-241 |
| Cow position: | chr13:11538725-11538566 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 94-224 |
| Cow position: | chr13:17563628-17563497 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 96-222 |
| Cow position: | chr13:6087006-6087134 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 111-226 |
| Cow position: | chr13:15104905-15104789 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 112-220 |
| Cow position: | chr13:9982194-9982301 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 97 |
| Conread position: | 78-226 |
| Cow position: | chr14:7481617-7481469 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 9 |
| Conread position: | 79-232 |
| Cow position: | chr14:27275123-27274965 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 120 |
| Conread position: | 82-228 |
| Cow position: | chr14:34331369-34331518 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 54 |
| Conread position: | 73-209 |
| Cow position: | chr15:41000057-41000204 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 73-244 |
| Cow position: | chr15:36849191-36849025 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 79-208 |
| Cow position: | chr15:23719476-23719606 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 79-263 |
| Cow position: | chr15:2141296-2141477 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 80-232 |
| Cow position: | chr15:45584739-45584591 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 82-201 |
| Cow position: | chr15:5657838-5657721 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 110-201 |
| Cow position: | chr15:48590285-48590377 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 110-227 |
| Cow position: | chr15:28514443-28514562 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 111-233 |
| Cow position: | chr15:10737786-10737908 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 145-242 |
| Cow position: | chr15:21927502-21927402 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 73-225 |
| Cow position: | chr16:51247011-51247157 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 73-242 |
| Cow position: | chr16:11922951-11922782 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 79-208 |
| Cow position: | chr16:52363766-52363901 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 79-222 |
| Cow position: | chr16:48448805-48448948 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 82-216 |
| Cow position: | chr16:51239143-51239011 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 100-223 |
| Cow position: | chr16:43675027-43675152 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 112-228 |
| Cow position: | chr16:6823814-6823928 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 122-217 |
| Cow position: | chr16:51258158-51258061 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 55-222 |
| Cow position: | chr17:21298544-21298713 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 74-232 |
| Cow position: | chr17:4472414-4472255 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 79-222 |
| Cow position: | chr17:3067736-3067589 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 112 |
| Conread position: | 96-207 |
| Cow position: | chr17:3782306-3782416 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 110-228 |
| Cow position: | chr17:21604589-21604710 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 114-228 |
| Cow position: | chr17:35127112-35127229 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 73-195 |
| Cow position: | chr18:4534980-4534861 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 74-221 |
| Cow position: | chr18:53038877-53039021 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 82-223 |
| Cow position: | chr18:24705483-24705625 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 82-241 |
| Cow position: | chr18:4757421-4757260 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 89-228 |
| Cow position: | chr18:7214593-7214738 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 10-813 |
| Cow position: | chr19:43498885-43498094 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 642 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 73-223 |
| Cow position: | chr19:33525893-33525745 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 82-222 |
| Cow position: | chr19:52735182-52735327 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 83-232 |
| Cow position: | chr19:7421920-7422076 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 139 |
| Conread position: | 106-228 |
| Cow position: | chr19:44572166-44572290 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 117-207 |
| Cow position: | chr19:19919301-19919213 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 117-240 |
| Cow position: | chr19:53405728-53405604 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 82, 91 |
| Conread position: | 73-239 |
| Cow position: | chr2:39600733-39600565 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 139 |
| Conread position: | 74-215 |
| Cow position: | chr2:66097658-66097515 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 82-208 |
| Cow position: | chr2:11659090-11658960 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 83-226 |
| Cow position: | chr2:7524045-7523906 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 105-228 |
| Cow position: | chr2:22254063-22253938 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 110-208 |
| Cow position: | chr2:59817947-59817848 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 110-227 |
| Cow position: | chr2:69793734-69793616 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 111-243 |
| Cow position: | chr2:53705477-53705616 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 119-226 |
| Cow position: | chr2:46169762-46169653 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 73-218 |
| Cow position: | chr20:36842693-36842832 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 33 |
| Conread position: | 73-241 |
| Cow position: | chr20:23870700-23870527 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 79-217 |
| Cow position: | chr20:15589168-15589308 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 127 |
| Conread position: | 89-223 |
| Cow position: | chr20:16253569-16253706 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 111-228 |
| Cow position: | chr20:31799027-31798910 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 117-228 |
| Cow position: | chr20:1009287-1009176 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 74 |
| Conread position: | 129-218 |
| Cow position: | chr20:32550366-32550275 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 69-208 |
| Cow position: | chr21:396319-396463 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 79-206 |
| Cow position: | chr21:48478754-48478619 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 82-207 |
| Cow position: | chr21:29014410-29014282 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 83-204 |
| Cow position: | chr21:4998128-4998004 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 111-217 |
| Cow position: | chr21:12200309-12200416 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 114-218 |
| Cow position: | chr21:29016028-29015925 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 116-217 |
| Cow position: | chr21:7390850-7390748 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 61-229 |
| Cow position: | chr22:20846916-20847085 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 73-217 |
| Cow position: | chr22:26316529-26316670 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 73-232 |
| Cow position: | chr22:12914687-12914843 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 79-201 |
| Cow position: | chr22:8504417-8504535 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 10 |
| Conread position: | 79-222 |
| Cow position: | chr22:10286049-10286192 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 82-209 |
| Cow position: | chr22:10323962-10324098 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 82-218 |
| Cow position: | chr22:10031019-10030879 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 82-218 |
| Cow position: | chr22:23440214-23440076 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 82-226 |
| Cow position: | chr22:16058055-16058202 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 82-231 |
| Cow position: | chr22:3486696-3486549 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 82-241 |
| Cow position: | chr22:32651576-32651737 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 83-204 |
| Cow position: | chr22:43743261-43743137 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 111-235 |
| Cow position: | chr22:6100346-6100220 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 117-228 |
| Cow position: | chr22:26421549-26421436 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 73-208 |
| Cow position: | chr23:23114137-23114275 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 73-225 |
| Cow position: | chr23:27030370-27030518 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 81-223 |
| Cow position: | chr23:20604619-20604477 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 82-223 |
| Cow position: | chr23:22105648-22105791 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 118 |
| Conread position: | 110-240 |
| Cow position: | chr23:18605025-18604897 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 72, 102 |
| Conread position: | 111-216 |
| Cow position: | chr23:40628436-40628542 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 111-223 |
| Cow position: | chr23:18106844-18106732 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 97 |
| Conread position: | 113-227 |
| Cow position: | chr23:39781616-39781727 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 65 |
| Conread position: | 133-222 |
| Cow position: | chr23:5707222-5707312 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 73-201 |
| Cow position: | chr24:40207127-40207263 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 77-228 |
| Cow position: | chr24:16622327-16622177 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 79-208 |
| Cow position: | chr24:43200216-43200089 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 79-228 |
| Cow position: | chr24:43024318-43024469 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 80-218 |
| Cow position: | chr24:34772264-34772124 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 82-228 |
| Cow position: | chr24:35466955-35466813 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 89-222 |
| Cow position: | chr24:19779291-19779158 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 89-222 |
| Cow position: | chr24:21737003-21736864 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 100-225 |
| Cow position: | chr24:34008182-34008054 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 55-196 |
| Cow position: | chr25:32907996-32908134 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 73-233 |
| Cow position: | chr25:15218206-15218373 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 90-228 |
| Cow position: | chr25:10497340-10497480 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 110-232 |
| Cow position: | chr25:40931409-40931534 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 112-223 |
| Cow position: | chr25:16000780-16000667 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 117-224 |
| Cow position: | chr25:26059802-26059911 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 121-222 |
| Cow position: | chr25:13822547-13822649 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 74-218 |
| Cow position: | chr26:22713284-22713434 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 101 |
| Conread position: | 79-218 |
| Cow position: | chr26:19774200-19774055 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 80-228 |
| Cow position: | chr26:32013998-32014145 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 82-220 |
| Cow position: | chr26:33241991-33242129 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 83-244 |
| Cow position: | chr26:31429338-31429495 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 89-216 |
| Cow position: | chr26:677871-677744 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 110, 25 |
| Conread position: | 106-232 |
| Cow position: | chr26:32362180-32362305 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 18-208 |
| Cow position: | chr27:25372462-25372652 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 65-227 |
| Cow position: | chr27:7212824-7212984 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 79-228 |
| Cow position: | chr27:27270668-27270823 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 135 |
| Conread position: | 79-228 |
| Cow position: | chr27:28290739-28290585 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 82-218 |
| Cow position: | chr27:30804073-30803937 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 82-241 |
| Cow position: | chr27:237142-236984 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 34 |
| Conread position: | 89-228 |
| Cow position: | chr27:18767196-18767338 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 110-241 |
| Cow position: | chr27:1789316-1789447 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 98 |
| Conread position: | 117-201 |
| Cow position: | chr27:911267-911351 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 56 |
| Conread position: | 127-242 |
| Cow position: | chr27:25368198-25368082 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 109 |
| Conread position: | 139-227 |
| Cow position: | chr27:31170238-31170328 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 55-222 |
| Cow position: | chr28:5366059-5365888 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 73-222 |
| Cow position: | chr28:6053352-6053495 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 82-217 |
| Cow position: | chr28:19024523-19024655 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 86-225 |
| Cow position: | chr28:12631647-12631789 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 79-226 |
| Cow position: | chr29:25333381-25333233 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 79-240 |
| Cow position: | chr29:11647174-11647338 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 82-186 |
| Cow position: | chr29:34687918-34688023 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 83-223 |
| Cow position: | chr29:16989805-16989950 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 134-235 |
| Cow position: | chr29:31835384-31835486 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 73-214 |
| Cow position: | chr3:13349100-13348964 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 73-228 |
| Cow position: | chr3:59617013-59616865 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 33 |
| Conread position: | 77-235 |
| Cow position: | chr3:58940204-58940359 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 122, 13 |
| Conread position: | 79-208 |
| Cow position: | chr3:53192234-53192107 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 79-218 |
| Cow position: | chr3:623787-623928 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 79-222 |
| Cow position: | chr3:57760556-57760702 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 23, 131 |
| Conread position: | 82-226 |
| Cow position: | chr3:29413121-29413265 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 83-227 |
| Cow position: | chr3:43863673-43863528 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 20, 109 |
| Conread position: | 85-226 |
| Cow position: | chr3:2680577-2680722 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 106-227 |
| Cow position: | chr3:61169873-61170000 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 110-222 |
| Cow position: | chr3:507565-507681 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 110-228 |
| Cow position: | chr3:47726060-47725943 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 53 |
| Conread position: | 49-208 |
| Cow position: | chr4:36577580-36577427 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 49-218 |
| Cow position: | chr4:65265262-65265094 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 73-228 |
| Cow position: | chr4:19542201-19542354 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 79-197 |
| Cow position: | chr4:63963279-63963396 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 79-218 |
| Cow position: | chr4:15462176-15462032 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 82-228 |
| Cow position: | chr4:45909899-45909756 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 90-208 |
| Cow position: | chr4:58305811-58305691 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 76 |
| Conread position: | 105-196 |
| Cow position: | chr4:20843019-20843112 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 111-217 |
| Cow position: | chr4:33140373-33140482 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 111-235 |
| Cow position: | chr4:67408566-67408689 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 119-241 |
| Cow position: | chr4:40520299-40520423 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 122-241 |
| Cow position: | chr4:61351690-61351814 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 19-228 |
| Cow position: | chr5:37377936-37378144 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 79-222 |
| Cow position: | chr5:63987338-63987186 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 145 |
| Conread position: | 82-228 |
| Cow position: | chr5:24069501-24069650 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 105-228 |
| Cow position: | chr5:73536725-73536849 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 111-223 |
| Cow position: | chr5:50964531-50964644 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 117-223 |
| Cow position: | chr5:49566423-49566530 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 73-227 |
| Cow position: | chr6:24964453-24964298 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 78-225 |
| Cow position: | chr6:6098145-6098001 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 80-222 |
| Cow position: | chr6:10636247-10636391 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 82-228 |
| Cow position: | chr6:10696360-10696513 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 82-244 |
| Cow position: | chr6:37199413-37199248 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 105 |
| Conread position: | 110-235 |
| Cow position: | chr6:32210576-32210450 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 55-223 |
| Cow position: | chr7:9800455-9800628 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 55-224 |
| Cow position: | chr7:23640802-23640634 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 79-240 |
| Cow position: | chr7:61552044-61552208 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 80-222 |
| Cow position: | chr7:62553515-62553659 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 116-238 |
| Cow position: | chr7:40276038-40275914 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 72-229 |
| Cow position: | chr8:3673453-3673612 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 140 |
| Conread position: | 111-207 |
| Cow position: | chr8:38645193-38645097 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 88, 73 |
| Conread position: | 111-215 |
| Cow position: | chr8:34478235-34478341 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 111-218 |
| Cow position: | chr8:52229559-52229451 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 112-236 |
| Cow position: | chr8:60575598-60575472 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 79-197 |
| Cow position: | chr9:34811423-34811302 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 89-239 |
| Cow position: | chr9:36826843-36826693 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 105 |
| Conread position: | 108-208 |
| Cow position: | chr9:25431985-25432086 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 124-215 |
| Cow position: | chr9:63960260-63960352 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 137-243 |
| Cow position: | chr9:31215988-31215881 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 19-226 |
| Cow position: | chrX:33151899-33151686 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 65-224 |
| Cow position: | chrX:32976018-32975854 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 73-223 |
| Cow position: | chrX:42164497-42164648 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 73-253 |
| Cow position: | chrX:27667528-27667710 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 134 |
| Conread position: | 77-221 |
| Cow position: | chrX:40557572-40557424 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 78-227 |
| Cow position: | chrX:5872425-5872573 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 82-212 |
| Cow position: | chrX:6850322-6850450 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 82-228 |
| Cow position: | chrX:42147957-42148109 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 86-215 |
| Cow position: | chrX:40531927-40531798 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 114-197 |
| Cow position: | chrX:9416531-9416448 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 78 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-240 |
| Cow position: | chrX:6651628-6651752 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 82, 120 |
| Conread position: | 123-236 |
| Cow position: | chrX:17301237-17301122 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 130-228 |
| Cow position: | chrX:11633824-11633924 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 131-241 |
| Cow position: | chrX:26625337-26625226 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 0 |