Cow genome map

Conread name: Thy1-THY010072G09

Conread position: 312-888
Cow position: chr1:1103784-1103210 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 396
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 51

Conread position: 312-888
Cow position: chr1:3670227-3669669 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 7

Conread position: 313-567
Cow position: chr1:18138775-18138508 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 240

Conread position: 323-883
Cow position: chr1:85778606-85778028 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 257

Conread position: 323-887
Cow position: chr1:27311165-27310603 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 358-811
Cow position: chr1:22726175-22726636 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 312-688
Cow position: chr10:55285640-55286024 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 313-646
Cow position: chr10:7280177-7279838 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 150

Conread position: 313-826
Cow position: chr10:19705769-19705239 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 76

Conread position: 323-887
Cow position: chr10:48169391-48169978 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 262

Conread position: 325-684
Cow position: chr10:53981352-53980986 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 258

Conread position: 313-854
Cow position: chr11:27835236-27834678 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 196

Conread position: 313-887
Cow position: chr11:32079290-32078693 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 270

Conread position: 366-886
Cow position: chr11:27888414-27888940 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 346
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 195

Conread position: 321-888
Cow position: chr12:27514455-27515038 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 383
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 159

Conread position: 325-888
Cow position: chr12:15950011-15949432 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 172

Conread position: 337-569
Cow position: chr12:32065676-32065914 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 221

Conread position: 345-887
Cow position: chr12:21091914-21091365 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 168

Conread position: 373-688
Cow position: chr12:21200221-21200542 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 91

Conread position: 321-655
Cow position: chr13:54311593-54311930 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 173

Conread position: 321-886
Cow position: chr13:30275765-30275217 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 363
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 245

Conread position: 322-693
Cow position: chr13:21603287-21603665 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 8, 262

Conread position: 322-885
Cow position: chr13:34050275-34050860 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 259

Conread position: 323-871
Cow position: chr13:30304772-30305343 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 261

Conread position: 323-887
Cow position: chr13:61952835-61953401 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 313-888
Cow position: chr14:43559676-43560267 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 69

Conread position: 322-616
Cow position: chr14:14667674-14667374 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 270

Conread position: 313-852
Cow position: chr15:6083580-6084116 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 124

Conread position: 313-887
Cow position: chr15:4387195-4387789 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 267

Conread position: 322-810
Cow position: chr15:20355154-20354643 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 33

Conread position: 335-888
Cow position: chr15:7964483-7963920 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 137

Conread position: 340-882
Cow position: chr15:41322233-41321690 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 353
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 127

Conread position: 342-652
Cow position: chr15:41787224-41786913 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 80

Conread position: 348-606
Cow position: chr15:2411306-2411044 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 9

Conread position: 349-683
Cow position: chr15:48285160-48285494 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 142

Conread position: 362-651
Cow position: chr15:2441996-2442288 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 218

Conread position: 313-887
Cow position: chr16:43896168-43895575 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 267

Conread position: 319-866
Cow position: chr16:7379542-7378980 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 353-885
Cow position: chr16:38534157-38533618 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 5

Conread position: 307-885
Cow position: chr17:1656095-1655500 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 150

Conread position: 358-604
Cow position: chr17:41811412-41811660 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 31

Conread position: 313-887
Cow position: chr18:25922269-25922864 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 69

Conread position: 349-885
Cow position: chr18:28930810-28931362 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 362
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 132

Conread position: 312-782
Cow position: chr19:1660557-1661050 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 41

Conread position: 313-887
Cow position: chr19:343132-343722 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 18

Conread position: 313-888
Cow position: chr19:9706295-9705704 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 42

Conread position: 313-888
Cow position: chr19:23400367-23399786 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 32

Conread position: 322-603
Cow position: chr19:7071306-7071595 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 228

Conread position: 311-888
Cow position: chr2:5294242-5294841 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 151

Conread position: 313-887
Cow position: chr2:12222952-12222359 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 267

Conread position: 313-887
Cow position: chr2:80291437-80290842 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 267

Conread position: 321-662
Cow position: chr2:58795111-58794771 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 259

Conread position: 321-888
Cow position: chr2:10879446-10880019 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 389
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 10

Conread position: 322-577
Cow position: chr2:72739241-72738984 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 24, 48

Conread position: 322-888
Cow position: chr2:32410905-32410315 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 131

Conread position: 337-668
Cow position: chr2:85351787-85351473 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 89

Conread position: 341-888
Cow position: chr2:4924180-4923638 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 53

Conread position: 314-888
Cow position: chr20:8215415-8214830 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 75

Conread position: 310-534
Cow position: chr21:34655786-34656016 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 26

Conread position: 312-844
Cow position: chr21:30563619-30564175 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 268

Conread position: 318-664
Cow position: chr21:29003559-29003209 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 37

Conread position: 284-750
Cow position: chr22:521018-520519 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 9

Conread position: 311-606
Cow position: chr22:44348089-44347788 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 14

Conread position: 322-888
Cow position: chr22:34609484-34610065 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 339-888
Cow position: chr22:44417297-44416748 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 373
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 117

Conread position: 365-888
Cow position: chr22:36545105-36544572 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 157

Conread position: 314-887
Cow position: chr24:38585264-38584680 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 271

Conread position: 322-854
Cow position: chr24:14870447-14869883 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 267

Conread position: 325-771
Cow position: chr24:23096882-23096412 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 253

Conread position: 335-606
Cow position: chr24:16875223-16874952 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 240

Conread position: 313-882
Cow position: chr25:39556000-39555420 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 229

Conread position: 343-685
Cow position: chr25:18272949-18272607 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 27, 141

Conread position: 335-591
Cow position: chr26:6081544-6081280 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 228

Conread position: 322-744
Cow position: chr28:17188098-17188530 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 237

Conread position: 312-676
Cow position: chr3:64274808-64275173 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 313-727
Cow position: chr3:64685393-64684961 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 272

Conread position: 313-867
Cow position: chr3:29190366-29189787 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 236

Conread position: 313-885
Cow position: chr3:72670845-72670254 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 266

Conread position: 322-695
Cow position: chr3:21027901-21027532 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 23, 246

Conread position: 323-590
Cow position: chr3:7248252-7248530 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 24, 262

Conread position: 313-585
Cow position: chr4:39016298-39016578 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 58

Conread position: 313-688
Cow position: chr5:3787553-3787940 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 272

Conread position: 313-854
Cow position: chr5:54696191-54695626 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 204

Conread position: 313-887
Cow position: chr5:24100263-24100858 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 267

Conread position: 323-876
Cow position: chr5:45701943-45702520 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 101

Conread position: 314-605
Cow position: chr6:44412374-44412083 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 73

Conread position: 322-816
Cow position: chr6:59503121-59503633 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 183

Conread position: 341-848
Cow position: chr6:53671863-53672361 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 135

Conread position: 374-640
Cow position: chr6:16673117-16673386 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 57, 183

Conread position: 312-823
Cow position: chr7:996764-997299 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 60

Conread position: 324-887
Cow position: chr7:46747845-46748424 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 255

Conread position: 305-485
Cow position: chr8:50959482-50959292 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 119

Conread position: 314-888
Cow position: chr8:5681116-5680536 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 157

Conread position: 324-640
Cow position: chr8:19190733-19191064 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 66

Conread position: 325-885
Cow position: chr8:30486370-30485785 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 5

Conread position: 337-887
Cow position: chr8:12103957-12104534 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 383
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 186

Conread position: 365-884
Cow position: chr8:4272377-4272893 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 20

Conread position: 370-887
Cow position: chr8:46651932-46652464 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 211

Conread position: 313-745
Cow position: chr9:52035513-52035943 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 293
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 32, 45

Conread position: 313-887
Cow position: chr9:42311374-42311967 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 51

Conread position: 323-887
Cow position: chr9:2872025-2872626 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 260

Conread position: 369-839
Cow position: chr9:33951458-33950969 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 216

Conread position: 313-887
Cow position: chrX:38149181-38149781 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 272

Conread position: 313-887
Cow position: chrX:39696372-39696953 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 77

Conread position: 322-888
Cow position: chrX:10414537-10413960 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 80

Conread position: 324-885
Cow position: chrX:24997403-24996819 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 250