Cow genome map
| Conread name: | Thy1-THY010086E06 |
| Conread position: | 624-767 |
| Cow position: | chr10:16475194-16475338 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 540-776 |
| Cow position: | chr11:14730535-14730302 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 585-786 |
| Cow position: | chr11:1501307-1501104 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 594-786 |
| Cow position: | chr11:9705447-9705258 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 582-765 |
| Cow position: | chr12:18546708-18546894 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 617-766 |
| Cow position: | chr13:38539083-38538932 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 362-724 |
| Cow position: | chr14:29702014-29702383 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 525-767 |
| Cow position: | chr14:38039731-38039979 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 534-783 |
| Cow position: | chr14:35257789-35257538 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 672-782 |
| Cow position: | chr14:30668054-30667944 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 525-783 |
| Cow position: | chr15:4110004-4109753 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 66 |
| Conread position: | 525-784 |
| Cow position: | chr15:3565559-3565300 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 595-769 |
| Cow position: | chr15:21951509-21951333 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 70-809 |
| Cow position: | chr17:6074494-6075236 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 485 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 536-776 |
| Cow position: | chr18:15854428-15854665 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 549-776 |
| Cow position: | chr18:43658095-43658324 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 7 |
| Conread position: | 592-766 |
| Cow position: | chr18:46009333-46009508 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 592-776 |
| Cow position: | chr21:1691352-1691166 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 593-776 |
| Cow position: | chr21:21945617-21945432 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 591-776 |
| Cow position: | chr23:25846631-25846815 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 310-761 |
| Cow position: | chr24:37322467-37322008 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 303 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 480-801 |
| Cow position: | chr24:17307038-17306721 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 103, 28 |
| Conread position: | 591-776 |
| Cow position: | chr24:6525693-6525513 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 612-776 |
| Cow position: | chr24:8584583-8584743 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 534-766 |
| Cow position: | chr26:1602575-1602350 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 542-776 |
| Cow position: | chr26:5550623-5550855 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 127, 64 |
| Conread position: | 542-808 |
| Cow position: | chr27:25159905-25160173 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 318-766 |
| Cow position: | chr28:20618579-20618119 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 518-765 |
| Cow position: | chr28:10869803-10870056 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 591-767 |
| Cow position: | chr28:33247868-33248045 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 76, 120 |
| Conread position: | 535-776 |
| Cow position: | chr29:30262151-30261912 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 542-766 |
| Cow position: | chr29:18525113-18524878 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 70-782 |
| Cow position: | chr3:19892377-19891683 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 17 |
| Conread position: | 535-767 |
| Cow position: | chr3:11788537-11788301 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 608-767 |
| Cow position: | chr3:10213570-10213727 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 237-738 |
| Cow position: | chr4:38997267-38996776 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 310-803 |
| Cow position: | chr4:61110332-61109820 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 590-767 |
| Cow position: | chr4:14376201-14376025 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 82, 112 |
| Conread position: | 513-784 |
| Cow position: | chr5:61222230-61222511 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 101 |
| Conread position: | 535-786 |
| Cow position: | chr6:17931375-17931631 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 542-776 |
| Cow position: | chr6:61599114-61598881 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 129, 177 |
| Conread position: | 545-716 |
| Cow position: | chr6:60171075-60170901 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 571-776 |
| Cow position: | chr7:7212374-7212172 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 620-767 |
| Cow position: | chr8:37500921-37501070 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 544-767 |
| Cow position: | chr9:35318511-35318285 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 590-767 |
| Cow position: | chr9:16809155-16809333 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 82, 105 |
| Conread position: | 369-776 |
| Cow position: | chrX:13086207-13085794 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 525-756 |
| Cow position: | chrX:34841091-34840858 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 591-778 |
| Cow position: | chrX:17251186-17251003 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 113 |