Cow genome map
| Conread name: | Thy1-THY010093B10 |
| Conread position: | 420-901 |
| Cow position: | chr1:81665100-81664635 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 300, 124 |
| Conread position: | 422-839 |
| Cow position: | chr1:86544742-86544341 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 422-903 |
| Cow position: | chr1:76878427-76878899 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 433-681 |
| Cow position: | chr1:79453354-79453108 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 153, 176 |
| Conread position: | 433-887 |
| Cow position: | chr1:14240661-14240216 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 296 |
| Conread position: | 433-902 |
| Cow position: | chr1:35598405-35597944 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 22 |
| Conread position: | 433-903 |
| Cow position: | chr1:55273636-55273175 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 110 |
| Conread position: | 433-903 |
| Cow position: | chr1:72986864-72987323 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 69 |
| Conread position: | 441-903 |
| Cow position: | chr1:69770232-69770683 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 225 |
| Conread position: | 433-857 |
| Cow position: | chr10:23648862-23648450 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 429-901 |
| Cow position: | chr11:12763121-12762669 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 306 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 118, 57 |
| Conread position: | 433-903 |
| Cow position: | chr11:13087598-13087137 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 433-903 |
| Cow position: | chr11:26550545-26551000 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 144 |
| Conread position: | 433-903 |
| Cow position: | chr11:41024888-41025347 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 46 |
| Conread position: | 440-833 |
| Cow position: | chr11:81576606-81576228 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 365-656 |
| Cow position: | chr12:48436386-48436087 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 441-887 |
| Cow position: | chr14:5492278-5491840 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 288 |
| Conread position: | 422-706 |
| Cow position: | chr15:26591339-26591058 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 422-903 |
| Cow position: | chr15:25069486-25069015 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 108-893 |
| Cow position: | chr16:41281552-41282304 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 605 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 481, 44 |
| Conread position: | 433-729 |
| Cow position: | chr17:2244842-2244546 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 132, 111 |
| Conread position: | 422-903 |
| Cow position: | chr2:11726267-11726738 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 427-713 |
| Cow position: | chr2:1837624-1837339 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 56, 189 |
| Conread position: | 429-903 |
| Cow position: | chr2:8121597-8122056 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 209 |
| Conread position: | 433-903 |
| Cow position: | chr2:43210033-43210495 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 296 |
| Conread position: | 422-903 |
| Cow position: | chr20:30737231-30736755 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 433-857 |
| Cow position: | chr20:15089950-15089537 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 120 |
| Conread position: | 430-676 |
| Cow position: | chr22:40259726-40259963 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 161, 100 |
| Conread position: | 422-885 |
| Cow position: | chr25:9413479-9413927 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 11 |
| Conread position: | 422-691 |
| Cow position: | chr26:3833422-3833691 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 429-702 |
| Cow position: | chr27:1081814-1081554 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 433-903 |
| Cow position: | chr28:29222886-29222426 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 98 |
| Conread position: | 434-903 |
| Cow position: | chr28:22254800-22254331 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 304 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 152, 56 |
| Conread position: | 422-903 |
| Cow position: | chr3:6838303-6838778 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 426-852 |
| Cow position: | chr3:29391845-29391424 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 160, 122 |
| Conread position: | 431-903 |
| Cow position: | chr3:47078331-47077867 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 288 |
| Conread position: | 429-661 |
| Cow position: | chr4:4242115-4242340 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 73 |
| Conread position: | 429-857 |
| Cow position: | chr4:10044681-10044266 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 5 |
| Conread position: | 433-857 |
| Cow position: | chr4:2191205-2190795 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 115 |
| Conread position: | 422-903 |
| Cow position: | chr5:44275774-44276246 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 433-903 |
| Cow position: | chr6:20216068-20215606 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 273 |
| Conread position: | 433-903 |
| Cow position: | chr6:67553560-67554020 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 288 |
| Conread position: | 433-702 |
| Cow position: | chr7:46749401-46749670 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 153, 267 |
| Conread position: | 433-857 |
| Cow position: | chr7:46187440-46187842 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 153, 53 |
| Conread position: | 433-706 |
| Cow position: | chr8:19334192-19334466 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 441-653 |
| Cow position: | chr8:51884149-51883937 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 140, 122 |
| Conread position: | 433-857 |
| Cow position: | chr9:15052632-15052228 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 152, 83 |
| Conread position: | 441-903 |
| Cow position: | chr9:22803386-22802943 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 145, 106 |
| Conread position: | 422-903 |
| Cow position: | chrX:24509022-24509494 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 433-653 |
| Cow position: | chrX:29892252-29892472 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 154, 141 |
| Conread position: | 433-780 |
| Cow position: | chrX:29029533-29029181 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 156, 91 |