Non-Coding RNA Search

Cow genome map


           Conread name:
           Thy1-THY010099F01
        

               Conread position:
               3-325
               

               Cow position:
               chr1:97622356-97622042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               23-332
               

               Cow position:
               chr1:13195552-13195249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               23-332
               

               Cow position:
               chr1:18414584-18414285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               38-287
               

               Cow position:
               chr1:29916316-29916552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               80, 14
               

               Conread position:
               38-297
               

               Cow position:
               chr1:41735717-41735470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               43-346
               

               Cow position:
               chr1:20581848-20582143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               44-321
               

               Cow position:
               chr1:80764627-80764361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               44-323
               

               Cow position:
               chr1:22777635-22777367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               46-322
               

               Cow position:
               chr1:2765326-2765576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               62-311
               

               Cow position:
               chr1:81161930-81162178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               63-322
               

               Cow position:
               chr1:71136079-71136325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               63-332
               

               Cow position:
               chr1:21679082-21679333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               65-322
               

               Cow position:
               chr1:70389358-70389624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 175
               

               Conread position:
               65-325
               

               Cow position:
               chr1:61737026-61737274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               228, 57
               

               Conread position:
               65-325
               

               Cow position:
               chr1:90423152-90422904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               54, 49
               

               Conread position:
               65-332
               

               Cow position:
               chr1:59650198-59650455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               66-260
               

               Cow position:
               chr1:63038171-63038356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               57, 82
               

               Conread position:
               66-297
               

               Cow position:
               chr1:75347554-75347775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               66-301
               

               Cow position:
               chr1:31390659-31390433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               132, 79
               

               Conread position:
               66-322
               

               Cow position:
               chr1:28678453-28678698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               66-323
               

               Cow position:
               chr1:95765157-95764917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               213, 56
               

               Conread position:
               66-325
               

               Cow position:
               chr1:15902424-15902673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               66-325
               

               Cow position:
               chr1:69415780-69415532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               66-326
               

               Cow position:
               chr1:23099832-23100080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 86
               

               Conread position:
               66-330
               

               Cow position:
               chr1:64189430-64189683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               48, 88
               

               Conread position:
               66-332
               

               Cow position:
               chr1:44746797-44747045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               212, 49
               

               Conread position:
               66-332
               

               Cow position:
               chr1:76096368-76096621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 89
               

               Conread position:
               66-333
               

               Cow position:
               chr1:31190176-31189928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               215, 88
               

               Conread position:
               66-336
               

               Cow position:
               chr1:29975670-29975418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               66-339
               

               Cow position:
               chr1:74947190-74946930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               66-339
               

               Cow position:
               chr1:93110688-93110419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               48, 72
               

               Conread position:
               66-342
               

               Cow position:
               chr1:2997879-2998146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               199, 88
               

               Conread position:
               66-342
               

               Cow position:
               chr1:30066550-30066815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               66-362
               

               Cow position:
               chr1:32341276-32340980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               111, 32
               

               Conread position:
               67-302
               

               Cow position:
               chr1:72731971-72732196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               67-323
               

               Cow position:
               chr1:54216949-54217192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               212, 48
               

               Conread position:
               67-323
               

               Cow position:
               chr1:66355782-66355538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               211, 63
               

               Conread position:
               68-332
               

               Cow position:
               chr1:58825476-58825725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               216, 6
               

               Conread position:
               70-320
               

               Cow position:
               chr1:85141794-85141562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               211, 41
               

               Conread position:
               70-322
               

               Cow position:
               chr1:25793498-25793264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               199, 41
               

               Conread position:
               77-280
               

               Cow position:
               chr1:50345486-50345677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               79-326
               

               Cow position:
               chr1:15314977-15314738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               80-277
               

               Cow position:
               chr1:39121893-39121708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               82-319
               

               Cow position:
               chr1:26427918-26427689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 41
               

               Conread position:
               82-353
               

               Cow position:
               chr1:64218480-64218221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               208, 63
               

               Conread position:
               83-325
               

               Cow position:
               chr1:35843986-35843744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               187, 46
               

               Conread position:
               97-325
               

               Cow position:
               chr1:54289231-54289013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               187, 62
               

               Conread position:
               136-342
               

               Cow position:
               chr1:64624839-64624635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               148, 128
               

               Conread position:
               145-420
               

               Cow position:
               chr1:12227103-12226823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               149-325
               

               Cow position:
               chr1:56643601-56643426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               154-370
               

               Cow position:
               chr1:9958512-9958726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               156-339
               

               Cow position:
               chr1:82076587-82076768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               144, 15
               

               Conread position:
               159-323
               

               Cow position:
               chr1:765252-765085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 62
               

               Conread position:
               167-341
               

               Cow position:
               chr1:92981297-92981470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               115, 51
               

               Conread position:
               169-322
               

               Cow position:
               chr1:50261906-50261753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               108, 49
               

               Conread position:
               170-322
               

               Cow position:
               chr1:29337937-29338090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               111, 50
               

               Conread position:
               170-323
               

               Cow position:
               chr1:80384741-80384587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               170-325
               

               Cow position:
               chr1:79663416-79663256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               170-325
               

               Cow position:
               chr1:82378814-82378969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               114, 43
               

               Conread position:
               170-329
               

               Cow position:
               chr1:96346666-96346507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 142
               

               Conread position:
               170-339
               

               Cow position:
               chr1:75998445-75998279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               114, 48
               

               Conread position:
               174-280
               

               Cow position:
               chr1:82370974-82371079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               174-319
               

               Cow position:
               chr1:83926413-83926560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-322
               

               Cow position:
               chr1:59132190-59132041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 41
               

               Conread position:
               174-325
               

               Cow position:
               chr1:6130710-6130562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               174-325
               

               Cow position:
               chr1:90390356-90390202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               58, 136
               

               Conread position:
               174-326
               

               Cow position:
               chr1:70416156-70416307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               174-326
               

               Cow position:
               chr1:95229305-95229151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-332
               

               Cow position:
               chr1:24188249-24188406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               174-332
               

               Cow position:
               chr1:38205500-38205655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 128
               

               Conread position:
               174-332
               

               Cow position:
               chr1:45925066-45925226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               110, 52
               

               Conread position:
               174-342
               

               Cow position:
               chr1:46006179-46006012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               110, 130
               

               Conread position:
               174-342
               

               Cow position:
               chr1:62732599-62732762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               150, 44
               

               Conread position:
               175-323
               

               Cow position:
               chr1:43789883-43790030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               104, 7
               

               Conread position:
               175-333
               

               Cow position:
               chr1:33921253-33921095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               179-321
               

               Cow position:
               chr1:93031733-93031591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               179-325
               

               Cow position:
               chr1:39183790-39183645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               181-345
               

               Cow position:
               chr1:34920934-34921095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               182-324
               

               Cow position:
               chr1:97603604-97603462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               182-325
               

               Cow position:
               chr1:71782632-71782492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               109, 41
               

               Conread position:
               182-332
               

               Cow position:
               chr1:53920621-53920772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               99, 38
               

               Conread position:
               186-346
               

               Cow position:
               chr1:87149066-87149233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 157
               

               Conread position:
               203-325
               

               Cow position:
               chr1:19416823-19416702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               224-346
               

               Cow position:
               chr1:57390067-57389941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-319
               

               Cow position:
               chr10:26620732-26620419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               18, 166
               

               Conread position:
               1-325
               

               Cow position:
               chr10:15391337-15391638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               23-325
               

               Cow position:
               chr10:38429705-38429403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 83
               

               Conread position:
               23-325
               

               Cow position:
               chr10:42453974-42454268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               23-332
               

               Cow position:
               chr10:29689480-29689177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               38-342
               

               Cow position:
               chr10:6038462-6038174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               74, 108
               

               Conread position:
               39-334
               

               Cow position:
               chr10:26145544-26145251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 118
               

               Conread position:
               43-269
               

               Cow position:
               chr10:31855213-31855426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               43-332
               

               Cow position:
               chr10:30741259-30741530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               44-353
               

               Cow position:
               chr10:10124224-10124520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               229, 68
               

               Conread position:
               50-342
               

               Cow position:
               chr10:23949036-23948754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               62-342
               

               Cow position:
               chr10:69225823-69226097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               65-301
               

               Cow position:
               chr10:15874174-15873952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               65-325
               

               Cow position:
               chr10:19590863-19590615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               238, 78
               

               Conread position:
               65-325
               

               Cow position:
               chr10:56705686-56705437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               216, 49
               

               Conread position:
               66-319
               

               Cow position:
               chr10:49624667-49624910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               215, 60
               

               Conread position:
               66-332
               

               Cow position:
               chr10:6490863-6490611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               56, 74
               

               Conread position:
               66-332
               

               Cow position:
               chr10:9568724-9568473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               55, 70
               

               Conread position:
               66-332
               

               Cow position:
               chr10:41984986-41984731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               218, 88
               

               Conread position:
               66-332
               

               Cow position:
               chr10:62325517-62325766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               66-333
               

               Cow position:
               chr10:23096880-23096624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               66-333
               

               Cow position:
               chr10:45606521-45606277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               66-333
               

               Cow position:
               chr10:48255321-48255064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               215, 49
               

               Conread position:
               66-339
               

               Cow position:
               chr10:16683908-16683643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               66-340
               

               Cow position:
               chr10:8413150-8412890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               66-350
               

               Cow position:
               chr10:17863485-17863757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 79
               

               Conread position:
               66-352
               

               Cow position:
               chr10:19704612-19704332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               199, 81
               

               Conread position:
               66-356
               

               Cow position:
               chr10:24786008-24786290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               54, 86
               

               Conread position:
               67-319
               

               Cow position:
               chr10:52589788-52589538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               72-325
               

               Cow position:
               chr10:11404228-11403991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               78-324
               

               Cow position:
               chr10:65072206-65071970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               82-302
               

               Cow position:
               chr10:38518709-38518506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               161, 37
               

               Conread position:
               89-260
               

               Cow position:
               chr10:16599101-16598934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               149-332
               

               Cow position:
               chr10:11497195-11497377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               168-332
               

               Cow position:
               chr10:61426744-61426579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               113, 50
               

               Conread position:
               169-321
               

               Cow position:
               chr10:9794669-9794518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               115, 49
               

               Conread position:
               169-325
               

               Cow position:
               chr10:32560693-32560850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 16
               

               Conread position:
               170-325
               

               Cow position:
               chr10:52244654-52244498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               114, 50
               

               Conread position:
               170-332
               

               Cow position:
               chr10:1108471-1108307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               173-323
               

               Cow position:
               chr10:58608098-58608249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               174-331
               

               Cow position:
               chr10:52069977-52069820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               175-314
               

               Cow position:
               chr10:38449313-38449175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               175-323
               

               Cow position:
               chr10:49586469-49586319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               177-325
               

               Cow position:
               chr10:16386205-16386065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               178-333
               

               Cow position:
               chr10:45614108-45613954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               88, 36
               

               Conread position:
               179-323
               

               Cow position:
               chr10:11316955-11317099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 65
               

               Conread position:
               179-325
               

               Cow position:
               chr10:27538504-27538648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               105, 39
               

               Conread position:
               179-337
               

               Cow position:
               chr10:52889233-52889074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               182-303
               

               Cow position:
               chr10:2267041-2266920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 38
               

               Conread position:
               182-325
               

               Cow position:
               chr10:9341731-9341587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               182-325
               

               Cow position:
               chr10:45299816-45299956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               100, 36
               

               Conread position:
               182-332
               

               Cow position:
               chr10:68566184-68566328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               193-322
               

               Cow position:
               chr10:64364232-64364363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               22-321
               

               Cow position:
               chr11:7683816-7684108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               24-325
               

               Cow position:
               chr11:5648608-5648894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               25-333
               

               Cow position:
               chr11:84795883-84795586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               38-342
               

               Cow position:
               chr11:11752638-11752342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               39-332
               

               Cow position:
               chr11:9368710-9368988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               43-320
               

               Cow position:
               chr11:47566054-47565787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               43-342
               

               Cow position:
               chr11:54244562-54244844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               59-342
               

               Cow position:
               chr11:69402350-69402079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               65-325
               

               Cow position:
               chr11:56821343-56821087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               66-303
               

               Cow position:
               chr11:20491480-20491700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               66-318
               

               Cow position:
               chr11:50951463-50951703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               56, 94
               

               Conread position:
               66-325
               

               Cow position:
               chr11:21136721-21136969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-325
               

               Cow position:
               chr11:37372217-37372466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               66-325
               

               Cow position:
               chr11:45889873-45890114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               207, 45
               

               Conread position:
               66-331
               

               Cow position:
               chr11:7143335-7143615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 161
               

               Conread position:
               66-332
               

               Cow position:
               chr11:14308545-14308797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               66-332
               

               Cow position:
               chr11:67871696-67871441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               66-333
               

               Cow position:
               chr11:8828721-8828467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               218, 91
               

               Conread position:
               66-333
               

               Cow position:
               chr11:27681407-27681664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 89
               

               Conread position:
               66-333
               

               Cow position:
               chr11:50937839-50937575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               178, 19
               

               Conread position:
               66-339
               

               Cow position:
               chr11:38845354-38845098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               212, 61
               

               Conread position:
               66-339
               

               Cow position:
               chr11:52832808-52832557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               212, 52
               

               Conread position:
               66-339
               

               Cow position:
               chr11:77683076-77683341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               56, 82
               

               Conread position:
               66-342
               

               Cow position:
               chr11:41272044-41272308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-347
               

               Cow position:
               chr11:32439043-32438774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               66-347
               

               Cow position:
               chr11:64904906-64905173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               225, 56
               

               Conread position:
               67-333
               

               Cow position:
               chr11:34946163-34945908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               210, 78
               

               Conread position:
               69-336
               

               Cow position:
               chr11:9055870-9056126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               44, 85
               

               Conread position:
               76-323
               

               Cow position:
               chr11:50953648-50953410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               203, 37
               

               Conread position:
               80-325
               

               Cow position:
               chr11:19259592-19259357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               201, 73
               

               Conread position:
               80-325
               

               Cow position:
               chr11:43646492-43646255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               198, 46
               

               Conread position:
               83-339
               

               Cow position:
               chr11:16233017-16232762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               121, 41
               

               Conread position:
               92-332
               

               Cow position:
               chr11:11785265-11785495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               136-344
               

               Cow position:
               chr11:48900880-48900663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               144-325
               

               Cow position:
               chr11:373169-372989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               41, 14
               

               Conread position:
               151-342
               

               Cow position:
               chr11:56796547-56796357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               133, 26
               

               Conread position:
               154-338
               

               Cow position:
               chr11:76851852-76851669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               159-332
               

               Cow position:
               chr11:7333122-7332950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               169-322
               

               Cow position:
               chr11:31422729-31422883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 51
               

               Conread position:
               169-332
               

               Cow position:
               chr11:5188127-5188288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               100, 49
               

               Conread position:
               169-339
               

               Cow position:
               chr11:40275603-40275429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               109, 49
               

               Conread position:
               169-339
               

               Cow position:
               chr11:40279095-40278921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               109, 49
               

               Conread position:
               170-322
               

               Cow position:
               chr11:63156919-63156772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               170-325
               

               Cow position:
               chr11:63508413-63508566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               119, 45
               

               Conread position:
               170-332
               

               Cow position:
               chr11:52402463-52402625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               173-323
               

               Cow position:
               chr11:14046074-14045926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               173-332
               

               Cow position:
               chr11:6729669-6729830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               11, 54
               

               Conread position:
               174-311
               

               Cow position:
               chr11:14941605-14941469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               110, 15
               

               Conread position:
               174-322
               

               Cow position:
               chr11:19606317-19606464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               107, 62
               

               Conread position:
               174-324
               

               Cow position:
               chr11:47193518-47193668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               174-332
               

               Cow position:
               chr11:27722395-27722555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               174-334
               

               Cow position:
               chr11:44609568-44609726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               174-339
               

               Cow position:
               chr11:61427597-61427757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 49
               

               Conread position:
               174-339
               

               Cow position:
               chr11:65958697-65958532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               174-342
               

               Cow position:
               chr11:62574006-62573836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               175-325
               

               Cow position:
               chr11:40269590-40269443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               175-327
               

               Cow position:
               chr11:39864192-39864350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               175-342
               

               Cow position:
               chr11:34136506-34136673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               175-347
               

               Cow position:
               chr11:696344-696171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               109, 43
               

               Conread position:
               176-325
               

               Cow position:
               chr11:19501974-19502123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 41
               

               Conread position:
               181-325
               

               Cow position:
               chr11:32072155-32072298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 51
               

               Conread position:
               181-325
               

               Cow position:
               chr11:49218338-49218192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               182-332
               

               Cow position:
               chr11:65988235-65988383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               182-333
               

               Cow position:
               chr11:24216149-24216300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               182-379
               

               Cow position:
               chr11:34642222-34642023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               185-350
               

               Cow position:
               chr11:54058005-54058177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               186-332
               

               Cow position:
               chr11:22009372-22009225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               95, 140
               

               Conread position:
               201-355
               

               Cow position:
               chr11:33191591-33191437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               23-325
               

               Cow position:
               chr12:27055434-27055737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               43-325
               

               Cow position:
               chr12:25606568-25606841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               59-339
               

               Cow position:
               chr12:24559237-24559507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               223, 86
               

               Conread position:
               60-296
               

               Cow position:
               chr12:4582826-4583051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 22
               

               Conread position:
               66-302
               

               Cow position:
               chr12:27038868-27038631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               48, 129
               

               Conread position:
               66-325
               

               Cow position:
               chr12:30596357-30596603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               136, 46
               

               Conread position:
               66-325
               

               Cow position:
               chr12:33458033-33458274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr12:25312482-25312234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               66-342
               

               Cow position:
               chr12:18769185-18768921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               75-340
               

               Cow position:
               chr12:5680577-5680832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               76-302
               

               Cow position:
               chr12:32413410-32413627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               80-302
               

               Cow position:
               chr12:31198666-31198877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               82-323
               

               Cow position:
               chr12:5658845-5658614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               83-347
               

               Cow position:
               chr12:29691298-29691037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               156-325
               

               Cow position:
               chr12:11081135-11080965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               123, 59
               

               Conread position:
               169-332
               

               Cow position:
               chr12:42477987-42478151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 92
               

               Conread position:
               170-312
               

               Cow position:
               chr12:31528877-31528734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 48
               

               Conread position:
               171-321
               

               Cow position:
               chr12:8981074-8980924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               113, 130
               

               Conread position:
               174-325
               

               Cow position:
               chr12:12331528-12331375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr12:39781357-39781206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               174-341
               

               Cow position:
               chr12:25933667-25933832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 46
               

               Conread position:
               174-348
               

               Cow position:
               chr12:47486815-47486991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               175-325
               

               Cow position:
               chr12:10763240-10763399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               176-325
               

               Cow position:
               chr12:16850929-16850781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 125
               

               Conread position:
               181-342
               

               Cow position:
               chr12:44908005-44908167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 10
               

               Conread position:
               182-325
               

               Cow position:
               chr12:11520163-11520307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 82
               

               Conread position:
               182-326
               

               Cow position:
               chr12:40716054-40715913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               182-332
               

               Cow position:
               chr12:3816471-3816628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               184-322
               

               Cow position:
               chr12:32264413-32264274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               191-332
               

               Cow position:
               chr12:24681818-24681960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               205-347
               

               Cow position:
               chr12:5899524-5899664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-317
               

               Cow position:
               chr13:60650774-60651086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               1-342
               

               Cow position:
               chr13:54094958-54094604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               6-325
               

               Cow position:
               chr13:7010606-7010288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               18-347
               

               Cow position:
               chr13:12233330-12233661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               43-360
               

               Cow position:
               chr13:20180496-20180197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               44-325
               

               Cow position:
               chr13:6621508-6621778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               180, 66
               

               Conread position:
               52-325
               

               Cow position:
               chr13:25435046-25435311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               65-325
               

               Cow position:
               chr13:34995264-34995517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               65-342
               

               Cow position:
               chr13:33160935-33161198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               66-300
               

               Cow position:
               chr13:9082949-9083168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               132, 24
               

               Conread position:
               66-301
               

               Cow position:
               chr13:11834417-11834641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               66-323
               

               Cow position:
               chr13:17346863-17346626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               218, 26
               

               Conread position:
               66-324
               

               Cow position:
               chr13:32167255-32167498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               66-325
               

               Cow position:
               chr13:661583-661824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               216, 46
               

               Conread position:
               66-325
               

               Cow position:
               chr13:9803128-9802881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               57, 91
               

               Conread position:
               66-332
               

               Cow position:
               chr13:20466226-20466480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 32
               

               Conread position:
               66-338
               

               Cow position:
               chr13:1959069-1958805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 79
               

               Conread position:
               66-340
               

               Cow position:
               chr13:22886936-22887191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 49
               

               Conread position:
               66-342
               

               Cow position:
               chr13:11767983-11768249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               138, 77
               

               Conread position:
               66-342
               

               Cow position:
               chr13:13577975-13578238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               66-342
               

               Cow position:
               chr13:49200695-49200431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               66-346
               

               Cow position:
               chr13:15945543-15945267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               66-350
               

               Cow position:
               chr13:47188502-47188228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               216, 49
               

               Conread position:
               67-325
               

               Cow position:
               chr13:10932612-10932368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               68-353
               

               Cow position:
               chr13:15090851-15091124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               72-342
               

               Cow position:
               chr13:30271377-30271117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               76-341
               

               Cow position:
               chr13:21627834-21628083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               203, 63
               

               Conread position:
               77-321
               

               Cow position:
               chr13:23265782-23265548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               207, 70
               

               Conread position:
               82-321
               

               Cow position:
               chr13:58348124-58347902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               202, 44
               

               Conread position:
               149-325
               

               Cow position:
               chr13:26522945-26523124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               169-332
               

               Cow position:
               chr13:8822832-8822675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               169-342
               

               Cow position:
               chr13:58615158-58614979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               170-341
               

               Cow position:
               chr13:47502746-47502912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               173-333
               

               Cow position:
               chr13:58762635-58762796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               111, 52
               

               Conread position:
               174-314
               

               Cow position:
               chr13:11171200-11171061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               174-332
               

               Cow position:
               chr13:39768440-39768276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-339
               

               Cow position:
               chr13:29820242-29820409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               174-341
               

               Cow position:
               chr13:33281970-33281801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               103, 44
               

               Conread position:
               174-345
               

               Cow position:
               chr13:32717900-32718073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 44
               

               Conread position:
               175-319
               

               Cow position:
               chr13:52569039-52569185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               175-325
               

               Cow position:
               chr13:32904742-32904592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               109, 43
               

               Conread position:
               176-347
               

               Cow position:
               chr13:57341330-57341504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               179-339
               

               Cow position:
               chr13:17796327-17796165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               105, 70
               

               Conread position:
               179-342
               

               Cow position:
               chr13:17991618-17991451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               181-325
               

               Cow position:
               chr13:54564679-54564825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               182-302
               

               Cow position:
               chr13:25207070-25206949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               182-342
               

               Cow position:
               chr13:20156443-20156282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 38
               

               Conread position:
               182-342
               

               Cow position:
               chr13:34191758-34191920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               183-378
               

               Cow position:
               chr13:40464186-40463987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 165
               

               Conread position:
               186-332
               

               Cow position:
               chr13:46291611-46291461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 29
               

               Conread position:
               186-337
               

               Cow position:
               chr13:22783896-22784043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               187-322
               

               Cow position:
               chr13:56270285-56270422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               187-322
               

               Cow position:
               chr13:56281187-56281050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               187-342
               

               Cow position:
               chr13:26507886-26507731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 27
               

               Conread position:
               197-332
               

               Cow position:
               chr13:23047867-23048004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               205-352
               

               Cow position:
               chr13:19239354-19239210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               2-342
               

               Cow position:
               chr14:7647834-7648167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               6-324
               

               Cow position:
               chr14:12559290-12559606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               38-342
               

               Cow position:
               chr14:7582311-7582590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               46-341
               

               Cow position:
               chr14:28605370-28605087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               63-325
               

               Cow position:
               chr14:21691154-21691406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               58, 83
               

               Conread position:
               66-317
               

               Cow position:
               chr14:20045668-20045429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               225, 86
               

               Conread position:
               66-320
               

               Cow position:
               chr14:22381436-22381697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               66-323
               

               Cow position:
               chr14:44861120-44861360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               66-325
               

               Cow position:
               chr14:11615102-11615352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               218, 51
               

               Conread position:
               66-326
               

               Cow position:
               chr14:30179397-30179661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               66-334
               

               Cow position:
               chr14:35700542-35700288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               66-338
               

               Cow position:
               chr14:37678886-37679148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               217, 91
               

               Conread position:
               66-339
               

               Cow position:
               chr14:47604181-47604444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               66-342
               

               Cow position:
               chr14:23107443-23107172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               66-352
               

               Cow position:
               chr14:26108751-26108474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 82
               

               Conread position:
               67-320
               

               Cow position:
               chr14:39058693-39058453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               67-325
               

               Cow position:
               chr14:26493990-26493742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               67-332
               

               Cow position:
               chr14:31785082-31784842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 92
               

               Conread position:
               76-333
               

               Cow position:
               chr14:18979094-18979331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               89-332
               

               Cow position:
               chr14:20795878-20795640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               152-342
               

               Cow position:
               chr14:47600366-47600553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               132, 51
               

               Conread position:
               169-280
               

               Cow position:
               chr14:28327097-28327206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               169-325
               

               Cow position:
               chr14:26805024-26805182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               169-338
               

               Cow position:
               chr14:19022872-19023039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               169-342
               

               Cow position:
               chr14:36080889-36081064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               112, 5
               

               Conread position:
               174-322
               

               Cow position:
               chr14:6441930-6441780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr14:47519731-47519882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               108, 41
               

               Conread position:
               174-332
               

               Cow position:
               chr14:38355210-38355052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 77
               

               Conread position:
               174-346
               

               Cow position:
               chr14:41531643-41531812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               110, 70
               

               Conread position:
               175-325
               

               Cow position:
               chr14:10692248-10692391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               176-323
               

               Cow position:
               chr14:26153251-26153397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               103, 13
               

               Conread position:
               176-325
               

               Cow position:
               chr14:44032055-44031904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               182-319
               

               Cow position:
               chr14:20284168-20284029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               182-325
               

               Cow position:
               chr14:45849202-45849347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               182-332
               

               Cow position:
               chr14:20701802-20701956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               182-337
               

               Cow position:
               chr14:37333712-37333559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               121, 36
               

               Conread position:
               198-324
               

               Cow position:
               chr14:38688238-38688362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               1-302
               

               Cow position:
               chr15:8230325-8230628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 156
               

               Conread position:
               2-280
               

               Cow position:
               chr15:40498059-40498330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 125
               

               Conread position:
               6-323
               

               Cow position:
               chr15:34255502-34255800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               23-332
               

               Cow position:
               chr15:12170469-12170153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               23-343
               

               Cow position:
               chr15:24976967-24977275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               23-345
               

               Cow position:
               chr15:26933740-26934051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               38-338
               

               Cow position:
               chr15:3572513-3572799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               39-331
               

               Cow position:
               chr15:31616812-31617093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 111
               

               Conread position:
               43-353
               

               Cow position:
               chr15:27863140-27863438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               238, 29
               

               Conread position:
               44-345
               

               Cow position:
               chr15:20482660-20482950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               46-334
               

               Cow position:
               chr15:21836865-21836596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               52-321
               

               Cow position:
               chr15:31545175-31545428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               63-325
               

               Cow position:
               chr15:25689148-25688882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 239
               

               Conread position:
               66-321
               

               Cow position:
               chr15:14758090-14758329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               180, 65
               

               Conread position:
               66-325
               

               Cow position:
               chr15:10570450-10570697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               66-332
               

               Cow position:
               chr15:6749686-6749938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               66-332
               

               Cow position:
               chr15:24285143-24284894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 46
               

               Conread position:
               66-332
               

               Cow position:
               chr15:47821538-47821286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               154, 70
               

               Conread position:
               66-336
               

               Cow position:
               chr15:9970813-9971071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               218, 48
               

               Conread position:
               66-342
               

               Cow position:
               chr15:27247664-27247408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               67-307
               

               Cow position:
               chr15:38323001-38322769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               79-322
               

               Cow position:
               chr15:42195115-42195342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               80-301
               

               Cow position:
               chr15:28177618-28177394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 140
               

               Conread position:
               80-332
               

               Cow position:
               chr15:50177261-50177018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               82-349
               

               Cow position:
               chr15:8022198-8021948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               94-342
               

               Cow position:
               chr15:17788243-17788008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               113-325
               

               Cow position:
               chr15:37918772-37918562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               171, 10
               

               Conread position:
               156-362
               

               Cow position:
               chr15:20778102-20777893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               128, 15
               

               Conread position:
               167-340
               

               Cow position:
               chr15:2201380-2201208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               116, 51
               

               Conread position:
               170-280
               

               Cow position:
               chr15:17911215-17911105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               170-321
               

               Cow position:
               chr15:7059332-7059484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr15:23109215-23109367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               174-325
               

               Cow position:
               chr15:24411487-24411337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               108, 15
               

               Conread position:
               174-325
               

               Cow position:
               chr15:43612150-43612000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               108, 58
               

               Conread position:
               174-332
               

               Cow position:
               chr15:49237925-49238080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               174-342
               

               Cow position:
               chr15:30958147-30958314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 76
               

               Conread position:
               174-342
               

               Cow position:
               chr15:31483438-31483264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               176-325
               

               Cow position:
               chr15:20402479-20402627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 45
               

               Conread position:
               176-332
               

               Cow position:
               chr15:20370661-20370815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               180-325
               

               Cow position:
               chr15:2117946-2117801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 38
               

               Conread position:
               182-323
               

               Cow position:
               chr15:10189423-10189284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               6-325
               

               Cow position:
               chr16:54515568-54515892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               6-332
               

               Cow position:
               chr16:15805826-15806132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               23-336
               

               Cow position:
               chr16:19003214-19002905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               23-342
               

               Cow position:
               chr16:56445536-56445231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 128
               

               Conread position:
               25-347
               

               Cow position:
               chr16:23066531-23066850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               38-325
               

               Cow position:
               chr16:48493077-48493354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               39-327
               

               Cow position:
               chr16:689602-689878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               39-342
               

               Cow position:
               chr16:44270-44554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               42-320
               

               Cow position:
               chr16:36930416-36930150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               44-332
               

               Cow position:
               chr16:16545979-16546248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               59-332
               

               Cow position:
               chr16:44581155-44580896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 87
               

               Conread position:
               66-301
               

               Cow position:
               chr16:37719084-37719308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               215, 11
               

               Conread position:
               66-323
               

               Cow position:
               chr16:53267650-53267894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               199, 55
               

               Conread position:
               66-325
               

               Cow position:
               chr16:18427112-18427353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               66-325
               

               Cow position:
               chr16:18557337-18557090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               134, 45
               

               Conread position:
               66-325
               

               Cow position:
               chr16:51069992-51069742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               66-332
               

               Cow position:
               chr16:45693073-45693323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               48, 89
               

               Conread position:
               66-346
               

               Cow position:
               chr16:11085456-11085190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               56, 63
               

               Conread position:
               66-395
               

               Cow position:
               chr16:15808901-15809220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               213, 69
               

               Conread position:
               67-333
               

               Cow position:
               chr16:27723140-27723411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               69-326
               

               Cow position:
               chr16:38620887-38621129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               151, 46
               

               Conread position:
               76-323
               

               Cow position:
               chr16:27013830-27014072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               38, 84
               

               Conread position:
               80-321
               

               Cow position:
               chr16:28827238-28827008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               201, 35
               

               Conread position:
               89-277
               

               Cow position:
               chr16:56104964-56104790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               107-342
               

               Cow position:
               chr16:22808596-22808365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               169-325
               

               Cow position:
               chr16:30929897-30930052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               170-321
               

               Cow position:
               chr16:5580331-5580484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               111, 50
               

               Conread position:
               174-300
               

               Cow position:
               chr16:23978412-23978285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               118, 44
               

               Conread position:
               174-311
               

               Cow position:
               chr16:44693162-44693025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               174-311
               

               Cow position:
               chr16:47909322-47909183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 44
               

               Conread position:
               174-325
               

               Cow position:
               chr16:50114207-50114361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               174-341
               

               Cow position:
               chr16:16056038-16055873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               175-334
               

               Cow position:
               chr16:56282969-56283127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               109, 45
               

               Conread position:
               179-325
               

               Cow position:
               chr16:228469-228324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               179-342
               

               Cow position:
               chr16:1440458-1440617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               179-342
               

               Cow position:
               chr16:10611598-10611444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               179-342
               

               Cow position:
               chr16:52577484-52577648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               180-325
               

               Cow position:
               chr16:3566191-3566335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               104, 34
               

               Conread position:
               180-325
               

               Cow position:
               chr16:20664317-20664461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               101, 43
               

               Conread position:
               182-332
               

               Cow position:
               chr16:9407849-9407698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               182-332
               

               Cow position:
               chr16:25464085-25464230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               182-342
               

               Cow position:
               chr16:47963320-47963482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               184-325
               

               Cow position:
               chr16:10406550-10406406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               185-332
               

               Cow position:
               chr16:51652698-51652847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               187-331
               

               Cow position:
               chr16:52565454-52565598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               193-323
               

               Cow position:
               chr16:4708861-4708730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               193-341
               

               Cow position:
               chr16:11772209-11772058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 28
               

               Conread position:
               194-325
               

               Cow position:
               chr16:55070480-55070346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-342
               

               Cow position:
               chr17:27505000-27505330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               6-280
               

               Cow position:
               chr17:18569033-18568771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               50-342
               

               Cow position:
               chr17:10634110-10633818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               66-296
               

               Cow position:
               chr17:4085723-4085939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               191, 49
               

               Conread position:
               66-325
               

               Cow position:
               chr17:7614415-7614164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               66-325
               

               Cow position:
               chr17:24880708-24880953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               216, 48
               

               Conread position:
               66-336
               

               Cow position:
               chr17:13716071-13715811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               77-300
               

               Cow position:
               chr17:19891599-19891812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               39, 69
               

               Conread position:
               89-286
               

               Cow position:
               chr17:41892075-41891889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               134-325
               

               Cow position:
               chr17:21730282-21730085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 92
               

               Conread position:
               155-342
               

               Cow position:
               chr17:8093889-8094073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               123, 63
               

               Conread position:
               159-296
               

               Cow position:
               chr17:7595192-7595334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               161-322
               

               Cow position:
               chr17:5380998-5381161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               168-342
               

               Cow position:
               chr17:30236252-30236420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               113, 11
               

               Conread position:
               169-323
               

               Cow position:
               chr17:13229434-13229588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 49
               

               Conread position:
               170-323
               

               Cow position:
               chr17:1328655-1328808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 50
               

               Conread position:
               170-325
               

               Cow position:
               chr17:10769454-10769297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               174-302
               

               Cow position:
               chr17:8215253-8215381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               174-325
               

               Cow position:
               chr17:10314482-10314634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               174-325
               

               Cow position:
               chr17:18829533-18829690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr17:23147480-23147631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               174-325
               

               Cow position:
               chr17:34870141-34870296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               174-333
               

               Cow position:
               chr17:10220912-10221070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               174-342
               

               Cow position:
               chr17:3620025-3619854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               110, 75
               

               Conread position:
               174-343
               

               Cow position:
               chr17:11655438-11655612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-343
               

               Cow position:
               chr17:35387940-35387770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 132
               

               Conread position:
               174-346
               

               Cow position:
               chr17:7163834-7163659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               174-355
               

               Cow position:
               chr17:36818101-36818279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               175-325
               

               Cow position:
               chr17:27819357-27819504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 49
               

               Conread position:
               175-325
               

               Cow position:
               chr17:36173911-36173754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 43
               

               Conread position:
               175-332
               

               Cow position:
               chr17:31798386-31798229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               175-332
               

               Cow position:
               chr17:38139571-38139728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               94, 43
               

               Conread position:
               176-333
               

               Cow position:
               chr17:14278125-14278284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               179-317
               

               Cow position:
               chr17:5041340-5041201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               182-325
               

               Cow position:
               chr17:15922907-15923050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               191-325
               

               Cow position:
               chr17:42775190-42775055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 29
               

               Conread position:
               1-342
               

               Cow position:
               chr18:51271938-51271589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               6-344
               

               Cow position:
               chr18:33843243-33842927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               23-296
               

               Cow position:
               chr18:21682141-21681868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               23-347
               

               Cow position:
               chr18:15831748-15831442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               44-326
               

               Cow position:
               chr18:45961404-45961132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               63-325
               

               Cow position:
               chr18:51298370-51298619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               49, 91
               

               Conread position:
               66-284
               

               Cow position:
               chr18:35359864-35360064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               66-293
               

               Cow position:
               chr18:23424813-23425026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               218, 57
               

               Conread position:
               66-301
               

               Cow position:
               chr18:39211140-39210898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 39
               

               Conread position:
               66-312
               

               Cow position:
               chr18:32773770-32774004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               216, 79
               

               Conread position:
               66-324
               

               Cow position:
               chr18:16842169-16841913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               66-325
               

               Cow position:
               chr18:29796531-29796290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-343
               

               Cow position:
               chr18:23714993-23714710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               67-301
               

               Cow position:
               chr18:16726543-16726764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               211, 78
               

               Conread position:
               67-325
               

               Cow position:
               chr18:248919-248675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               215, 33
               

               Conread position:
               67-328
               

               Cow position:
               chr18:32908943-32909190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               214, 38
               

               Conread position:
               73-337
               

               Cow position:
               chr18:15689185-15689433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               211, 71
               

               Conread position:
               80-331
               

               Cow position:
               chr18:24855938-24855698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               202, 73
               

               Conread position:
               82-323
               

               Cow position:
               chr18:38126541-38126312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 78
               

               Conread position:
               83-311
               

               Cow position:
               chr18:46873953-46873741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               83-334
               

               Cow position:
               chr18:2438855-2438616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               244, 32
               

               Conread position:
               84-319
               

               Cow position:
               chr18:42060985-42061209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               124-341
               

               Cow position:
               chr18:21706248-21706030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               126-302
               

               Cow position:
               chr18:48717996-48717824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               155, 51
               

               Conread position:
               144-342
               

               Cow position:
               chr18:29949705-29949899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               171-332
               

               Cow position:
               chr18:44493501-44493339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               107, 42
               

               Conread position:
               172-332
               

               Cow position:
               chr18:4378753-4378912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 46
               

               Conread position:
               173-325
               

               Cow position:
               chr18:28297878-28297725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 78
               

               Conread position:
               174-323
               

               Cow position:
               chr18:50700675-50700822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               174-325
               

               Cow position:
               chr18:21574973-21575116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               175-324
               

               Cow position:
               chr18:26372909-26373059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               109, 45
               

               Conread position:
               182-333
               

               Cow position:
               chr18:24364064-24363913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               192-342
               

               Cow position:
               chr18:14520041-14520194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-302
               

               Cow position:
               chr19:5648829-5648528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               1-323
               

               Cow position:
               chr19:24721526-24721835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               27, 131
               

               Conread position:
               6-325
               

               Cow position:
               chr19:1153055-1153368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               40-321
               

               Cow position:
               chr19:28842480-28842202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               131, 16
               

               Conread position:
               42-332
               

               Cow position:
               chr19:31126687-31126966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               43-325
               

               Cow position:
               chr19:1713249-1712979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               59-325
               

               Cow position:
               chr19:30935874-30935608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 21
               

               Conread position:
               65-331
               

               Cow position:
               chr19:11876790-11876535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               66-321
               

               Cow position:
               chr19:36461616-36461371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 82
               

               Conread position:
               66-325
               

               Cow position:
               chr19:31614028-31614270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               66-332
               

               Cow position:
               chr19:35344840-35345097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               135, 93
               

               Conread position:
               66-339
               

               Cow position:
               chr19:2342397-2342654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               215, 84
               

               Conread position:
               66-342
               

               Cow position:
               chr19:9387551-9387813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               213, 68
               

               Conread position:
               66-384
               

               Cow position:
               chr19:15936752-15937060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               215, 49
               

               Conread position:
               68-344
               

               Cow position:
               chr19:11759331-11759051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               84, 263
               

               Conread position:
               74-342
               

               Cow position:
               chr19:5754881-5754613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 181
               

               Conread position:
               80-322
               

               Cow position:
               chr19:7029846-7030076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               89-333
               

               Cow position:
               chr19:38871004-38871238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               186, 60
               

               Conread position:
               167-311
               

               Cow position:
               chr19:42102594-42102450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               111, 26
               

               Conread position:
               170-325
               

               Cow position:
               chr19:20292086-20291931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               114, 47
               

               Conread position:
               170-338
               

               Cow position:
               chr19:40026924-40026759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               172-334
               

               Cow position:
               chr19:56008716-56008556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               173-346
               

               Cow position:
               chr19:22932540-22932365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               109, 45
               

               Conread position:
               174-302
               

               Cow position:
               chr19:46306328-46306202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               174-302
               

               Cow position:
               chr19:46497947-46498072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               174-314
               

               Cow position:
               chr19:5986244-5986386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr19:12040627-12040780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               174-328
               

               Cow position:
               chr19:4824973-4824817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-346
               

               Cow position:
               chr19:26003606-26003429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               176-325
               

               Cow position:
               chr19:47783754-47783601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               179-339
               

               Cow position:
               chr19:54817520-54817356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               179-407
               

               Cow position:
               chr19:50786522-50786300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               182-311
               

               Cow position:
               chr19:39986330-39986194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               182-341
               

               Cow position:
               chr19:2280626-2280469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               191-346
               

               Cow position:
               chr19:36380251-36380405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               193-339
               

               Cow position:
               chr19:39223081-39222935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               88, 27
               

               Conread position:
               202-349
               

               Cow position:
               chr19:30653055-30652906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               6-323
               

               Cow position:
               chr2:36866923-36866615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               6-331
               

               Cow position:
               chr2:20868414-20868103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               23-325
               

               Cow position:
               chr2:42925170-42925464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               23-329
               

               Cow position:
               chr2:32453649-32453355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               23-332
               

               Cow position:
               chr2:31113737-31114013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               24-309
               

               Cow position:
               chr2:304490-304226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               257, 15
               

               Conread position:
               32-319
               

               Cow position:
               chr2:22859746-22859465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               203, 20
               

               Conread position:
               38-318
               

               Cow position:
               chr2:425717-425980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               38-321
               

               Cow position:
               chr2:14099548-14099818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               38-325
               

               Cow position:
               chr2:81348982-81348704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               44-325
               

               Cow position:
               chr2:72583810-72584094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               111, 64
               

               Conread position:
               45-325
               

               Cow position:
               chr2:38118095-38117832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               66-275
               

               Cow position:
               chr2:30640115-30640317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               66-277
               

               Cow position:
               chr2:70579779-70579580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               66-295
               

               Cow position:
               chr2:15162669-15162887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               66-302
               

               Cow position:
               chr2:48748801-48748575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               213, 82
               

               Conread position:
               66-306
               

               Cow position:
               chr2:50793672-50793900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-318
               

               Cow position:
               chr2:18061704-18061464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               66-321
               

               Cow position:
               chr2:24106320-24106560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               48, 89
               

               Conread position:
               66-323
               

               Cow position:
               chr2:26042314-26042068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               204, 56
               

               Conread position:
               66-325
               

               Cow position:
               chr2:31457414-31457661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               225, 81
               

               Conread position:
               66-325
               

               Cow position:
               chr2:51027881-51028127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               66-325
               

               Cow position:
               chr2:67485173-67485417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               215, 48
               

               Conread position:
               66-327
               

               Cow position:
               chr2:10356746-10356504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               66-330
               

               Cow position:
               chr2:4383969-4383719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               218, 48
               

               Conread position:
               66-332
               

               Cow position:
               chr2:20250635-20250886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               66-332
               

               Cow position:
               chr2:39855716-39855963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               51, 88
               

               Conread position:
               66-334
               

               Cow position:
               chr2:72902362-72902104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               218, 61
               

               Conread position:
               66-339
               

               Cow position:
               chr2:1651332-1651586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               213, 51
               

               Conread position:
               66-339
               

               Cow position:
               chr2:4070846-4071108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               66-339
               

               Cow position:
               chr2:33659777-33659514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               215, 83
               

               Conread position:
               66-341
               

               Cow position:
               chr2:17427063-17427360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               69, 173
               

               Conread position:
               66-342
               

               Cow position:
               chr2:13604395-13604660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-345
               

               Cow position:
               chr2:31155638-31155905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               205, 23
               

               Conread position:
               66-383
               

               Cow position:
               chr2:20916063-20915765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               67-302
               

               Cow position:
               chr2:41461294-41461520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               67-332
               

               Cow position:
               chr2:6055893-6056143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 88
               

               Conread position:
               68-302
               

               Cow position:
               chr2:33596740-33596507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               213, 66
               

               Conread position:
               69-323
               

               Cow position:
               chr2:41313823-41314059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               70-325
               

               Cow position:
               chr2:70663945-70664191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               77-323
               

               Cow position:
               chr2:29382742-29382507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               162, 53
               

               Conread position:
               82-342
               

               Cow position:
               chr2:51769548-51769798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               108-323
               

               Cow position:
               chr2:25084648-25084857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               169, 27
               

               Conread position:
               145-325
               

               Cow position:
               chr2:36998130-36998308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               149-314
               

               Cow position:
               chr2:67759152-67758992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               132, 30
               

               Conread position:
               151-311
               

               Cow position:
               chr2:42817407-42817570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               157-338
               

               Cow position:
               chr2:2937563-2937743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               169-325
               

               Cow position:
               chr2:38913687-38913844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               169-342
               

               Cow position:
               chr2:56884437-56884609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               113, 72
               

               Conread position:
               170-320
               

               Cow position:
               chr2:64226495-64226645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 50
               

               Conread position:
               170-338
               

               Cow position:
               chr2:50591795-50591970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               170-342
               

               Cow position:
               chr2:62384666-62384493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               120, 156
               

               Conread position:
               171-323
               

               Cow position:
               chr2:42774294-42774447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               106, 47
               

               Conread position:
               173-326
               

               Cow position:
               chr2:51041595-51041439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               174-311
               

               Cow position:
               chr2:29032728-29032867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-321
               

               Cow position:
               chr2:46783537-46783685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               174-327
               

               Cow position:
               chr2:68981989-68981834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-332
               

               Cow position:
               chr2:45146415-45146575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 153
               

               Conread position:
               174-342
               

               Cow position:
               chr2:8245537-8245708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 155
               

               Conread position:
               175-329
               

               Cow position:
               chr2:64973451-64973606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               116, 151
               

               Conread position:
               176-336
               

               Cow position:
               chr2:78852746-78852589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               154, 41
               

               Conread position:
               193-325
               

               Cow position:
               chr2:46228210-46228077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               91, 112
               

               Conread position:
               1-302
               

               Cow position:
               chr20:14512924-14513225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               1-325
               

               Cow position:
               chr20:23163994-23163690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               264, 40
               

               Conread position:
               23-325
               

               Cow position:
               chr20:9706991-9706703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               44-332
               

               Cow position:
               chr20:5763348-5763072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               44-332
               

               Cow position:
               chr20:17397311-17397042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               235, 74
               

               Conread position:
               50-323
               

               Cow position:
               chr20:8261862-8262127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               71, 100
               

               Conread position:
               65-332
               

               Cow position:
               chr20:6903283-6903535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               66-268
               

               Cow position:
               chr20:26077050-26077238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               66-301
               

               Cow position:
               chr20:25274320-25274101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               66-302
               

               Cow position:
               chr20:17670150-17670375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               66-311
               

               Cow position:
               chr20:19865223-19865449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               202, 49
               

               Conread position:
               66-319
               

               Cow position:
               chr20:1205963-1205728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               214, 79
               

               Conread position:
               66-322
               

               Cow position:
               chr20:10759506-10759264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               66-322
               

               Cow position:
               chr20:42254829-42255071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               226, 41
               

               Conread position:
               66-332
               

               Cow position:
               chr20:20359815-20359561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               218, 81
               

               Conread position:
               66-341
               

               Cow position:
               chr20:7100746-7101021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               133, 33
               

               Conread position:
               69-332
               

               Cow position:
               chr20:24869062-24868792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               48, 158
               

               Conread position:
               70-325
               

               Cow position:
               chr20:25686377-25686132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               120-333
               

               Cow position:
               chr20:13609064-13608844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               6, 105
               

               Conread position:
               151-347
               

               Cow position:
               chr20:6105112-6104912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               169-324
               

               Cow position:
               chr20:4934011-4933856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               169-339
               

               Cow position:
               chr20:15241706-15241532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 22
               

               Conread position:
               170-324
               

               Cow position:
               chr20:18530494-18530649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               170-325
               

               Cow position:
               chr20:13617285-13617445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               174-302
               

               Cow position:
               chr20:21236720-21236845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               174-323
               

               Cow position:
               chr20:16979812-16979962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               108, 41
               

               Conread position:
               174-338
               

               Cow position:
               chr20:10838149-10837984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               153, 104
               

               Conread position:
               174-346
               

               Cow position:
               chr20:24849870-24850038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               104, 90
               

               Conread position:
               176-332
               

               Cow position:
               chr20:32972616-32972768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               180-339
               

               Cow position:
               chr20:32587427-32587586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 38
               

               Conread position:
               180-346
               

               Cow position:
               chr20:4157486-4157654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               6, 127
               

               Conread position:
               182-332
               

               Cow position:
               chr20:3105087-3105240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               182-342
               

               Cow position:
               chr20:39669016-39669173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               186-339
               

               Cow position:
               chr20:37136161-37136316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               186-348
               

               Cow position:
               chr20:25823353-25823515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               2-240
               

               Cow position:
               chr21:35897728-35897476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               18-342
               

               Cow position:
               chr21:31576431-31576740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               23-322
               

               Cow position:
               chr21:4276662-4276370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               25-345
               

               Cow position:
               chr21:18378771-18379099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               43-339
               

               Cow position:
               chr21:13358286-13358579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               44-276
               

               Cow position:
               chr21:24698446-24698666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               44-325
               

               Cow position:
               chr21:37121268-37120976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               24, 185
               

               Conread position:
               46-346
               

               Cow position:
               chr21:12301550-12301254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               65-301
               

               Cow position:
               chr21:47823287-47823058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               66-301
               

               Cow position:
               chr21:23801138-23800916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               225, 72
               

               Conread position:
               66-302
               

               Cow position:
               chr21:25800386-25800613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               218, 63
               

               Conread position:
               66-311
               

               Cow position:
               chr21:9353434-9353670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 87
               

               Conread position:
               66-325
               

               Cow position:
               chr21:13737044-13737283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               215, 14
               

               Conread position:
               66-325
               

               Cow position:
               chr21:18941842-18941598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               215, 14
               

               Conread position:
               66-326
               

               Cow position:
               chr21:15742101-15741847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               66-332
               

               Cow position:
               chr21:23786020-23786273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               55, 46
               

               Conread position:
               66-332
               

               Cow position:
               chr21:31662455-31662709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               218, 12
               

               Conread position:
               66-333
               

               Cow position:
               chr21:9940200-9939945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               69-342
               

               Cow position:
               chr21:47715549-47715294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               212, 46
               

               Conread position:
               71-340
               

               Cow position:
               chr21:4098865-4099118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               210, 36
               

               Conread position:
               72-349
               

               Cow position:
               chr21:25286510-25286777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               209, 34
               

               Conread position:
               75-325
               

               Cow position:
               chr21:6697033-6696781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               76-325
               

               Cow position:
               chr21:11676052-11675817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               205, 38
               

               Conread position:
               160-325
               

               Cow position:
               chr21:22398229-22398384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               163-332
               

               Cow position:
               chr21:44220436-44220608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               169-325
               

               Cow position:
               chr21:49661755-49661604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               115, 5
               

               Conread position:
               173-342
               

               Cow position:
               chr21:45355916-45356090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               174-302
               

               Cow position:
               chr21:2413137-2413267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr21:17428580-17428732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               109, 58
               

               Conread position:
               174-325
               

               Cow position:
               chr21:22353153-22353001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               107, 58
               

               Conread position:
               174-325
               

               Cow position:
               chr21:26147162-26147314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 5
               

               Conread position:
               174-332
               

               Cow position:
               chr21:26753575-26753732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               105, 131
               

               Conread position:
               174-347
               

               Cow position:
               chr21:46242156-46241985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 49
               

               Conread position:
               182-333
               

               Cow position:
               chr21:17807045-17806895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               182-346
               

               Cow position:
               chr21:33947161-33946998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               188-342
               

               Cow position:
               chr21:6012815-6012662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               91, 39
               

               Conread position:
               26-322
               

               Cow position:
               chr22:26941680-26941954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               38-377
               

               Cow position:
               chr22:9466508-9466824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               50-301
               

               Cow position:
               chr22:26760618-26760858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               61-330
               

               Cow position:
               chr22:22210326-22210069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               62-322
               

               Cow position:
               chr22:15358164-15358412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               63-329
               

               Cow position:
               chr22:34675441-34675692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               63-331
               

               Cow position:
               chr22:41389027-41389282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               66-245
               

               Cow position:
               chr22:42605553-42605725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               66-302
               

               Cow position:
               chr22:22997401-22997623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               212, 56
               

               Conread position:
               66-310
               

               Cow position:
               chr22:4651104-4651334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               154, 41
               

               Conread position:
               66-322
               

               Cow position:
               chr22:33386584-33386344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               66-323
               

               Cow position:
               chr22:5622794-5622556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               66-324
               

               Cow position:
               chr22:2913202-2913445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               215, 31
               

               Conread position:
               66-324
               

               Cow position:
               chr22:19653062-19652803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               66-325
               

               Cow position:
               chr22:17780801-17780561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               213, 23
               

               Conread position:
               66-332
               

               Cow position:
               chr22:7301910-7301665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               218, 39
               

               Conread position:
               66-339
               

               Cow position:
               chr22:139379-139129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               66-346
               

               Cow position:
               chr22:27224049-27224317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               211, 59
               

               Conread position:
               66-347
               

               Cow position:
               chr22:11778687-11778421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               215, 52
               

               Conread position:
               67-348
               

               Cow position:
               chr22:42612381-42612654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               69-319
               

               Cow position:
               chr22:44924134-44923894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               176, 45
               

               Conread position:
               80-323
               

               Cow position:
               chr22:25714940-25715172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               201, 41
               

               Conread position:
               88-301
               

               Cow position:
               chr22:31512875-31512658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               29, 123
               

               Conread position:
               149-300
               

               Cow position:
               chr22:23270353-23270202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               132, 26
               

               Conread position:
               154-321
               

               Cow position:
               chr22:1081786-1081954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               130, 17
               

               Conread position:
               170-342
               

               Cow position:
               chr22:45291334-45291508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               109, 44
               

               Conread position:
               171-344
               

               Cow position:
               chr22:19223768-19223935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               173-323
               

               Cow position:
               chr22:32690423-32690273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 45
               

               Conread position:
               173-326
               

               Cow position:
               chr22:17074386-17074539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               111, 41
               

               Conread position:
               174-320
               

               Cow position:
               chr22:37554496-37554352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               174-325
               

               Cow position:
               chr22:25168272-25168124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               174-327
               

               Cow position:
               chr22:22999611-22999763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               174-332
               

               Cow position:
               chr22:15424153-15424311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 129
               

               Conread position:
               174-332
               

               Cow position:
               chr22:17184669-17184509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-333
               

               Cow position:
               chr22:42946031-42945876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               174-342
               

               Cow position:
               chr22:43873074-43873245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               48, 91
               

               Conread position:
               174-351
               

               Cow position:
               chr22:8397811-8397631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               175-332
               

               Cow position:
               chr22:28685345-28685502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               175-337
               

               Cow position:
               chr22:7287528-7287697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               176-355
               

               Cow position:
               chr22:27468925-27469105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               179-311
               

               Cow position:
               chr22:39983174-39983041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 39
               

               Conread position:
               179-337
               

               Cow position:
               chr22:19069111-19069269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               112, 41
               

               Conread position:
               179-341
               

               Cow position:
               chr22:23751158-23750997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               182-325
               

               Cow position:
               chr22:31192551-31192408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               182-331
               

               Cow position:
               chr22:33066982-33067132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               100, 39
               

               Conread position:
               182-364
               

               Cow position:
               chr22:32053399-32053581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               196-347
               

               Cow position:
               chr22:33763443-33763290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               1-307
               

               Cow position:
               chr23:17000570-17000861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               49-325
               

               Cow position:
               chr23:14840601-14840342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               63-324
               

               Cow position:
               chr23:5389624-5389873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               66-302
               

               Cow position:
               chr23:11434330-11434109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 6
               

               Conread position:
               66-314
               

               Cow position:
               chr23:40651535-40651308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               170, 45
               

               Conread position:
               66-325
               

               Cow position:
               chr23:35155301-35155549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               66-325
               

               Cow position:
               chr23:35177246-35177496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               66-332
               

               Cow position:
               chr23:37224139-37223891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               215, 84
               

               Conread position:
               66-342
               

               Cow position:
               chr23:21276094-21275824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               68-332
               

               Cow position:
               chr23:15872766-15872514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               53, 63
               

               Conread position:
               68-332
               

               Cow position:
               chr23:21866672-21866923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               216, 31
               

               Conread position:
               144-309
               

               Cow position:
               chr23:16072352-16072185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               169-317
               

               Cow position:
               chr23:40609387-40609533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               115, 61
               

               Conread position:
               171-323
               

               Cow position:
               chr23:28721215-28721065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               110, 47
               

               Conread position:
               174-321
               

               Cow position:
               chr23:8930114-8929969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr23:38941645-38941796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               108, 41
               

               Conread position:
               174-339
               

               Cow position:
               chr23:347722-347560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               174-347
               

               Cow position:
               chr23:1552638-1552805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               175-325
               

               Cow position:
               chr23:21847778-21847930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               176-324
               

               Cow position:
               chr23:33927832-33927982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               179-325
               

               Cow position:
               chr23:22272450-22272302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               180-325
               

               Cow position:
               chr23:7611292-7611434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               6, 36
               

               Conread position:
               180-345
               

               Cow position:
               chr23:24411034-24411199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               111, 146
               

               Conread position:
               189-325
               

               Cow position:
               chr23:30736109-30735975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               92, 28
               

               Conread position:
               23-332
               

               Cow position:
               chr24:32158434-32158120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               24-310
               

               Cow position:
               chr24:25677876-25678157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               115, 15
               

               Conread position:
               48-332
               

               Cow position:
               chr24:28045635-28045906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               50-339
               

               Cow position:
               chr24:6507883-6507609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               59-347
               

               Cow position:
               chr24:31378649-31378921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               62-349
               

               Cow position:
               chr24:19754470-19754753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 86
               

               Conread position:
               66-322
               

               Cow position:
               chr24:26455742-26455986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               66-325
               

               Cow position:
               chr24:23824522-23824285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               66-325
               

               Cow position:
               chr24:27054310-27054555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               48, 80
               

               Conread position:
               66-325
               

               Cow position:
               chr24:34369105-34368859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               215, 49
               

               Conread position:
               66-336
               

               Cow position:
               chr24:1438371-1438113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               66-339
               

               Cow position:
               chr24:14746536-14746812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 57
               

               Conread position:
               66-339
               

               Cow position:
               chr24:39350316-39350060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               68-321
               

               Cow position:
               chr24:14617559-14617801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 51
               

               Conread position:
               69-319
               

               Cow position:
               chr24:25164938-25165177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               215, 58
               

               Conread position:
               70-320
               

               Cow position:
               chr24:5849489-5849233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               82-321
               

               Cow position:
               chr24:22888507-22888735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               123-348
               

               Cow position:
               chr24:41482938-41483163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               152-325
               

               Cow position:
               chr24:41332612-41332435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               174-293
               

               Cow position:
               chr24:39474407-39474287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 90
               

               Conread position:
               174-314
               

               Cow position:
               chr24:23176701-23176563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 44
               

               Conread position:
               174-325
               

               Cow position:
               chr24:2143746-2143897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               174-325
               

               Cow position:
               chr24:38291856-38292003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               115, 46
               

               Conread position:
               174-328
               

               Cow position:
               chr24:28349572-28349734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               174-332
               

               Cow position:
               chr24:6427701-6427858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               107, 130
               

               Conread position:
               174-332
               

               Cow position:
               chr24:28279621-28279778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               103, 44
               

               Conread position:
               174-334
               

               Cow position:
               chr24:4785678-4785515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               104, 69
               

               Conread position:
               174-339
               

               Cow position:
               chr24:42943124-42942954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               174-342
               

               Cow position:
               chr24:39742811-39742981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 48
               

               Conread position:
               175-332
               

               Cow position:
               chr24:16055514-16055354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               104, 40
               

               Conread position:
               182-321
               

               Cow position:
               chr24:44929353-44929493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               182-342
               

               Cow position:
               chr24:42916377-42916224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               193-325
               

               Cow position:
               chr24:15909635-15909769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               195-345
               

               Cow position:
               chr24:6246372-6246215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               89, 25
               

               Conread position:
               43-311
               

               Cow position:
               chr25:8080625-8080882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               52-341
               

               Cow position:
               chr25:14075212-14075489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               54-321
               

               Cow position:
               chr25:13560301-13560048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               59-325
               

               Cow position:
               chr25:40957071-40956817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               63-325
               

               Cow position:
               chr25:8576607-8576863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               66-298
               

               Cow position:
               chr25:34379184-34378962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               66-302
               

               Cow position:
               chr25:14570296-14570519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 89
               

               Conread position:
               66-318
               

               Cow position:
               chr25:13562360-13562595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               66-325
               

               Cow position:
               chr25:27534995-27534749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               66-325
               

               Cow position:
               chr25:33205156-33204915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               66-384
               

               Cow position:
               chr25:26457756-26457450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               215, 57
               

               Conread position:
               67-332
               

               Cow position:
               chr25:18000604-18000354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               214, 37
               

               Conread position:
               68-326
               

               Cow position:
               chr25:26240464-26240710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               216, 71
               

               Conread position:
               68-332
               

               Cow position:
               chr25:24405809-24405556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               214, 75
               

               Conread position:
               68-333
               

               Cow position:
               chr25:31732409-31732136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               68-378
               

               Cow position:
               chr25:34970390-34970672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               148, 71
               

               Conread position:
               70-332
               

               Cow position:
               chr25:36501308-36501064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               215, 52
               

               Conread position:
               97-326
               

               Cow position:
               chr25:6177987-6178205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               187, 48
               

               Conread position:
               151-339
               

               Cow position:
               chr25:20614721-20614909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               152-323
               

               Cow position:
               chr25:9109335-9109507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 69
               

               Conread position:
               152-334
               

               Cow position:
               chr25:18810856-18811039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               156-320
               

               Cow position:
               chr25:20885084-20884923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               125, 23
               

               Conread position:
               169-325
               

               Cow position:
               chr25:20428333-20428488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               169-372
               

               Cow position:
               chr25:4716270-4716473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               115, 46
               

               Conread position:
               170-344
               

               Cow position:
               chr25:18239523-18239703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               120, 15
               

               Conread position:
               174-297
               

               Cow position:
               chr25:10748482-10748358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               116, 44
               

               Conread position:
               174-325
               

               Cow position:
               chr25:17701975-17701822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               91, 31
               

               Conread position:
               174-326
               

               Cow position:
               chr25:5365547-5365703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 135
               

               Conread position:
               174-332
               

               Cow position:
               chr25:41094117-41093958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               174-342
               

               Cow position:
               chr25:12932644-12932815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               110, 90
               

               Conread position:
               174-342
               

               Cow position:
               chr25:23248722-23248554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               174-348
               

               Cow position:
               chr25:18448831-18449002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 58
               

               Conread position:
               182-288
               

               Cow position:
               chr25:395852-395959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               182-326
               

               Cow position:
               chr25:18228204-18228347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               100, 13
               

               Conread position:
               185-332
               

               Cow position:
               chr25:11040968-11041110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               1-336
               

               Cow position:
               chr26:3756083-3756416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               43-325
               

               Cow position:
               chr26:2769918-2769653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               45-323
               

               Cow position:
               chr26:14080625-14080890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 49
               

               Conread position:
               62-332
               

               Cow position:
               chr26:12669136-12669394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               54, 100
               

               Conread position:
               65-321
               

               Cow position:
               chr26:7162474-7162226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               65-332
               

               Cow position:
               chr26:14924425-14924678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               214, 49
               

               Conread position:
               66-322
               

               Cow position:
               chr26:18719198-18719440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               215, 61
               

               Conread position:
               66-323
               

               Cow position:
               chr26:19110854-19111099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               66-325
               

               Cow position:
               chr26:9632428-9632175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               66-325
               

               Cow position:
               chr26:21859764-21860010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               66-332
               

               Cow position:
               chr26:27585717-27585968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               49, 84
               

               Conread position:
               66-342
               

               Cow position:
               chr26:9064284-9064540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               67-298
               

               Cow position:
               chr26:10292533-10292762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 63
               

               Conread position:
               67-363
               

               Cow position:
               chr26:7955796-7956074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               68-342
               

               Cow position:
               chr26:32215388-32215655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               64, 70
               

               Conread position:
               76-325
               

               Cow position:
               chr26:16604237-16604481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               42, 84
               

               Conread position:
               89-334
               

               Cow position:
               chr26:17204181-17203943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 62
               

               Conread position:
               143-332
               

               Cow position:
               chr26:12569828-12569643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 34
               

               Conread position:
               150-322
               

               Cow position:
               chr26:21578088-21577914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               169-332
               

               Cow position:
               chr26:12520060-12520224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               170-302
               

               Cow position:
               chr26:7387800-7387933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               170-332
               

               Cow position:
               chr26:10137707-10137546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               111, 48
               

               Conread position:
               174-302
               

               Cow position:
               chr26:19768769-19768639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr26:12652207-12652055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               174-345
               

               Cow position:
               chr26:9102072-9101902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 70
               

               Conread position:
               176-323
               

               Cow position:
               chr26:3186586-3186735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               176-325
               

               Cow position:
               chr26:2196553-2196402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               179-318
               

               Cow position:
               chr26:10292818-10292956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               180-339
               

               Cow position:
               chr26:12216895-12217050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               6, 39
               

               Conread position:
               182-302
               

               Cow position:
               chr26:19935316-19935195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               210-332
               

               Cow position:
               chr26:32658938-32658814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               18-302
               

               Cow position:
               chr27:21681237-21681518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               23-325
               

               Cow position:
               chr27:21578508-21578791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               24-325
               

               Cow position:
               chr27:24341992-24341686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               36-319
               

               Cow position:
               chr27:6160043-6159777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               43-342
               

               Cow position:
               chr27:6454263-6453975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               52-325
               

               Cow position:
               chr27:13005885-13005633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               56-342
               

               Cow position:
               chr27:19601419-19601142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               222, 24
               

               Conread position:
               65-325
               

               Cow position:
               chr27:14937396-14937645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               49, 86
               

               Conread position:
               66-325
               

               Cow position:
               chr27:19083684-19083933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               215, 91
               

               Conread position:
               66-329
               

               Cow position:
               chr27:24224862-24225115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               66-333
               

               Cow position:
               chr27:1536687-1536954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               66-334
               

               Cow position:
               chr27:29038909-29039167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               216, 79
               

               Conread position:
               66-340
               

               Cow position:
               chr27:8430408-8430673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               66-346
               

               Cow position:
               chr27:12244095-12244364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               218, 61
               

               Conread position:
               67-302
               

               Cow position:
               chr27:25998732-25998508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               214, 32
               

               Conread position:
               67-325
               

               Cow position:
               chr27:27049879-27050121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               47, 79
               

               Conread position:
               140-343
               

               Cow position:
               chr27:16525865-16526075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               158-334
               

               Cow position:
               chr27:1675105-1674922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               163-332
               

               Cow position:
               chr27:26441103-26441271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               118, 11
               

               Conread position:
               169-340
               

               Cow position:
               chr27:11746529-11746358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               109, 49
               

               Conread position:
               170-325
               

               Cow position:
               chr27:13958404-13958559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               119, 48
               

               Conread position:
               174-275
               

               Cow position:
               chr27:22781983-22781883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               174-303
               

               Cow position:
               chr27:6883970-6883842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr27:25880037-25879886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 8
               

               Conread position:
               174-344
               

               Cow position:
               chr27:24509755-24509591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               175-321
               

               Cow position:
               chr27:17875207-17875354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               176-344
               

               Cow position:
               chr27:30365252-30365080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               179-300
               

               Cow position:
               chr27:21991462-21991340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               102, 41
               

               Conread position:
               180-323
               

               Cow position:
               chr27:1899642-1899785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               109, 40
               

               Conread position:
               182-280
               

               Cow position:
               chr27:18219325-18219228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               182-323
               

               Cow position:
               chr27:25982792-25982932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 41
               

               Conread position:
               182-332
               

               Cow position:
               chr27:23662665-23662816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               182-357
               

               Cow position:
               chr27:24333689-24333866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               186-329
               

               Cow position:
               chr27:6037095-6036950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               2-353
               

               Cow position:
               chr28:9822130-9821770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               23-243
               

               Cow position:
               chr28:4098710-4098924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               23-253
               

               Cow position:
               chr28:2814632-2814405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               38-325
               

               Cow position:
               chr28:4274935-4274668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               43-326
               

               Cow position:
               chr28:5475121-5474854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               43-333
               

               Cow position:
               chr28:33285206-33284924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 116
               

               Conread position:
               45-325
               

               Cow position:
               chr28:12999009-12999271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               226, 7
               

               Conread position:
               56-323
               

               Cow position:
               chr28:15677810-15678062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               225, 56
               

               Conread position:
               62-311
               

               Cow position:
               chr28:3769741-3769507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               65-296
               

               Cow position:
               chr28:11007121-11007349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               66-276
               

               Cow position:
               chr28:12046985-12046786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 88
               

               Conread position:
               66-322
               

               Cow position:
               chr28:20963600-20963354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               66-325
               

               Cow position:
               chr28:6643352-6643103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               66-331
               

               Cow position:
               chr28:2517881-2517635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 63
               

               Conread position:
               66-342
               

               Cow position:
               chr28:4763807-4764073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               66-343
               

               Cow position:
               chr28:31166054-31165787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               66-346
               

               Cow position:
               chr28:1202309-1202045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               219, 26
               

               Conread position:
               66-353
               

               Cow position:
               chr28:15081992-15081718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               67-325
               

               Cow position:
               chr28:7540227-7539981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               217, 87
               

               Conread position:
               82-314
               

               Cow position:
               chr28:20275074-20275294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               83-325
               

               Cow position:
               chr28:11181216-11180988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               187, 48
               

               Conread position:
               94-302
               

               Cow position:
               chr28:8335919-8336116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               160-302
               

               Cow position:
               chr28:22331070-22331211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 19
               

               Conread position:
               169-333
               

               Cow position:
               chr28:18934474-18934641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               170-307
               

               Cow position:
               chr28:25340294-25340429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               114, 25
               

               Conread position:
               173-301
               

               Cow position:
               chr28:28640885-28641009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr28:17362577-17362424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               175-325
               

               Cow position:
               chr28:23703434-23703583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               103, 43
               

               Conread position:
               175-345
               

               Cow position:
               chr28:9294467-9294295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               176-342
               

               Cow position:
               chr28:14508344-14508172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               177-356
               

               Cow position:
               chr28:5979951-5980125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               179-276
               

               Cow position:
               chr28:22421955-22421859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               179-325
               

               Cow position:
               chr28:3940166-3940015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               179-338
               

               Cow position:
               chr28:34749765-34749926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               181-339
               

               Cow position:
               chr28:17625140-17624979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               182-333
               

               Cow position:
               chr28:3823106-3822956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 36
               

               Conread position:
               193-333
               

               Cow position:
               chr28:28513526-28513668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-325
               

               Cow position:
               chr29:39023506-39023167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               40, 166
               

               Conread position:
               1-342
               

               Cow position:
               chr29:11366077-11366421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               23-277
               

               Cow position:
               chr29:9938209-9937961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               23-326
               

               Cow position:
               chr29:26298846-26299141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               25, 130
               

               Conread position:
               49-332
               

               Cow position:
               chr29:8862584-8862302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               50-339
               

               Cow position:
               chr29:19907262-19907535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               59-325
               

               Cow position:
               chr29:29302741-29302492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               192, 21
               

               Conread position:
               65-332
               

               Cow position:
               chr29:11005655-11005908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               65-332
               

               Cow position:
               chr29:21265684-21265937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               219, 70
               

               Conread position:
               66-322
               

               Cow position:
               chr29:6772057-6772297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               66-325
               

               Cow position:
               chr29:6207989-6208231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               218, 81
               

               Conread position:
               66-325
               

               Cow position:
               chr29:29559793-29559551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr29:21186949-21186696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               218, 82
               

               Conread position:
               66-342
               

               Cow position:
               chr29:11071773-11071501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               120, 51
               

               Conread position:
               67-325
               

               Cow position:
               chr29:4367648-4367894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               67-332
               

               Cow position:
               chr29:1340709-1340962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               212, 15
               

               Conread position:
               68-325
               

               Cow position:
               chr29:21675321-21675561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 67
               

               Conread position:
               70-325
               

               Cow position:
               chr29:7663343-7663102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               35, 92
               

               Conread position:
               70-338
               

               Cow position:
               chr29:4444643-4444903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               82-332
               

               Cow position:
               chr29:4691452-4691211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               162, 36
               

               Conread position:
               83-324
               

               Cow position:
               chr29:26985166-26985397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               83-325
               

               Cow position:
               chr29:26317791-26318023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               198, 62
               

               Conread position:
               83-340
               

               Cow position:
               chr29:5616928-5616682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               198, 21
               

               Conread position:
               89-325
               

               Cow position:
               chr29:22895671-22895898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               169-322
               

               Cow position:
               chr29:23742248-23742098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               170-325
               

               Cow position:
               chr29:18021669-18021512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               170-346
               

               Cow position:
               chr29:942835-943014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 5
               

               Conread position:
               172-325
               

               Cow position:
               chr29:21012326-21012175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               174-277
               

               Cow position:
               chr29:36435448-36435551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr29:21174686-21174536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 83
               

               Conread position:
               174-332
               

               Cow position:
               chr29:40337519-40337364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 53
               

               Conread position:
               175-339
               

               Cow position:
               chr29:709114-708944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               175-339
               

               Cow position:
               chr29:35442443-35442275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               176-345
               

               Cow position:
               chr29:9662036-9662210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               178-314
               

               Cow position:
               chr29:16055110-16054976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               179-301
               

               Cow position:
               chr29:13127099-13126973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               179-321
               

               Cow position:
               chr29:3050194-3050335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               110, 28
               

               Conread position:
               180-332
               

               Cow position:
               chr29:19607500-19607347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               104, 40
               

               Conread position:
               184-320
               

               Cow position:
               chr29:44135308-44135171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               184-332
               

               Cow position:
               chr29:8794379-8794531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               197-339
               

               Cow position:
               chr29:6150075-6149932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               84, 23
               

               Conread position:
               1-255
               

               Cow position:
               chr3:15685098-15684845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               6-307
               

               Cow position:
               chr3:68262608-68262893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               23-323
               

               Cow position:
               chr3:9074483-9074199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 16
               

               Conread position:
               23-332
               

               Cow position:
               chr3:54340571-54340267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               23-333
               

               Cow position:
               chr3:49132207-49131903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 16
               

               Conread position:
               32-326
               

               Cow position:
               chr3:59608362-59608646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               33-342
               

               Cow position:
               chr3:3736162-3736469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               39-325
               

               Cow position:
               chr3:23111628-23111366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               40-325
               

               Cow position:
               chr3:74846832-74846558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               42-339
               

               Cow position:
               chr3:12255358-12255637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               43-325
               

               Cow position:
               chr3:16343479-16343758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               43-345
               

               Cow position:
               chr3:41718273-41718559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               79, 108
               

               Conread position:
               44-339
               

               Cow position:
               chr3:74611445-74611726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 106
               

               Conread position:
               44-348
               

               Cow position:
               chr3:20471484-20471195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               59-321
               

               Cow position:
               chr3:39911161-39910915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               225, 91
               

               Conread position:
               59-342
               

               Cow position:
               chr3:15221625-15221355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               63-333
               

               Cow position:
               chr3:36100735-36100986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 68
               

               Conread position:
               65-241
               

               Cow position:
               chr3:78530435-78530605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 90
               

               Conread position:
               66-247
               

               Cow position:
               chr3:63203331-63203502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               66-260
               

               Cow position:
               chr3:55777936-55778115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               66-280
               

               Cow position:
               chr3:33327608-33327811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               66-298
               

               Cow position:
               chr3:8457557-8457776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               218, 68
               

               Conread position:
               66-306
               

               Cow position:
               chr3:15655244-15655016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               66-314
               

               Cow position:
               chr3:53588483-53588247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               215, 60
               

               Conread position:
               66-321
               

               Cow position:
               chr3:34675623-34675867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               213, 91
               

               Conread position:
               66-322
               

               Cow position:
               chr3:61116954-61116707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               66-323
               

               Cow position:
               chr3:8752690-8752931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               66-325
               

               Cow position:
               chr3:27532754-27532513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               66-332
               

               Cow position:
               chr3:48211392-48211664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               97, 28
               

               Conread position:
               66-332
               

               Cow position:
               chr3:50614540-50614797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               218, 54
               

               Conread position:
               66-332
               

               Cow position:
               chr3:55991964-55991714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               215, 48
               

               Conread position:
               66-334
               

               Cow position:
               chr3:42584443-42584697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               66-338
               

               Cow position:
               chr3:11920136-11919875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               261, 48
               

               Conread position:
               66-342
               

               Cow position:
               chr3:42480519-42480781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               66-347
               

               Cow position:
               chr3:51492684-51492954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 88
               

               Conread position:
               66-351
               

               Cow position:
               chr3:48629690-48629419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 89
               

               Conread position:
               66-377
               

               Cow position:
               chr3:20993714-20994016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               67-301
               

               Cow position:
               chr3:66708167-66707945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 82
               

               Conread position:
               67-326
               

               Cow position:
               chr3:77225019-77225261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               67-332
               

               Cow position:
               chr3:58291989-58291737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               215, 56
               

               Conread position:
               67-342
               

               Cow position:
               chr3:54881664-54881940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               153, 48
               

               Conread position:
               68-336
               

               Cow position:
               chr3:28238667-28238425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               68-350
               

               Cow position:
               chr3:26089099-26088824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               172, 42
               

               Conread position:
               80-321
               

               Cow position:
               chr3:18214226-18213994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               204, 33
               

               Conread position:
               82-323
               

               Cow position:
               chr3:73436524-73436294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               196, 77
               

               Conread position:
               82-341
               

               Cow position:
               chr3:41550459-41550211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               88-325
               

               Cow position:
               chr3:56483436-56483668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               89-300
               

               Cow position:
               chr3:57830163-57829956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               112-302
               

               Cow position:
               chr3:36204492-36204678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               169, 53
               

               Conread position:
               152-302
               

               Cow position:
               chr3:46094799-46094947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               160-342
               

               Cow position:
               chr3:25076183-25076002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               123, 11
               

               Conread position:
               169-321
               

               Cow position:
               chr3:35278567-35278715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               114, 18
               

               Conread position:
               169-325
               

               Cow position:
               chr3:14505923-14505766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 51
               

               Conread position:
               170-325
               

               Cow position:
               chr3:73741877-73741721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               114, 25
               

               Conread position:
               173-325
               

               Cow position:
               chr3:31247661-31247809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               174-321
               

               Cow position:
               chr3:34086058-34085914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               174-325
               

               Cow position:
               chr3:5601170-5601020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               104, 86
               

               Conread position:
               174-342
               

               Cow position:
               chr3:17634046-17633880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               112, 46
               

               Conread position:
               174-346
               

               Cow position:
               chr3:24300357-24300538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               180-325
               

               Cow position:
               chr3:58448062-58447919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               180-332
               

               Cow position:
               chr3:22953881-22953730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               180-332
               

               Cow position:
               chr3:43590894-43591050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               181-301
               

               Cow position:
               chr3:62798781-62798659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               181-332
               

               Cow position:
               chr3:61411124-61411276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               182-325
               

               Cow position:
               chr3:83441546-83441401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               182-332
               

               Cow position:
               chr3:70354233-70354083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               184-342
               

               Cow position:
               chr3:33797686-33797846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               193-325
               

               Cow position:
               chr3:67275114-67274976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               194-332
               

               Cow position:
               chr3:56693250-56693381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               3-324
               

               Cow position:
               chr4:35870041-35870367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               24-302
               

               Cow position:
               chr4:20279199-20279469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               34, 94
               

               Conread position:
               38-302
               

               Cow position:
               chr4:23166800-23167044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               43-317
               

               Cow position:
               chr4:65116305-65116037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               43-326
               

               Cow position:
               chr4:31172572-31172838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               43-344
               

               Cow position:
               chr4:44665474-44665183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               50-377
               

               Cow position:
               chr4:2121494-2121183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               195, 68
               

               Conread position:
               52-342
               

               Cow position:
               chr4:12560934-12561219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               191, 14
               

               Conread position:
               62-327
               

               Cow position:
               chr4:5797878-5798131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               62-333
               

               Cow position:
               chr4:51122969-51123236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 86
               

               Conread position:
               63-322
               

               Cow position:
               chr4:40823200-40822950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               63-325
               

               Cow position:
               chr4:40433988-40433741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               63-333
               

               Cow position:
               chr4:22235244-22235498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               66-319
               

               Cow position:
               chr4:68795377-68795138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               66-321
               

               Cow position:
               chr4:22115527-22115766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               66-322
               

               Cow position:
               chr4:21073233-21072993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               218, 44
               

               Conread position:
               66-322
               

               Cow position:
               chr4:37880851-37881093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 65
               

               Conread position:
               66-325
               

               Cow position:
               chr4:23758724-23758966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               66-325
               

               Cow position:
               chr4:25972816-25973063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               66-326
               

               Cow position:
               chr4:12697559-12697795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               66-328
               

               Cow position:
               chr4:5913429-5913178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               218, 79
               

               Conread position:
               66-332
               

               Cow position:
               chr4:22249531-22249278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               215, 53
               

               Conread position:
               66-332
               

               Cow position:
               chr4:36945277-36945022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               49, 84
               

               Conread position:
               66-332
               

               Cow position:
               chr4:45918954-45919205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               66-333
               

               Cow position:
               chr4:6208377-6208632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               66-338
               

               Cow position:
               chr4:39767270-39767527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               66-341
               

               Cow position:
               chr4:27997602-27997874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               66-342
               

               Cow position:
               chr4:10992279-10992020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               213, 47
               

               Conread position:
               73-325
               

               Cow position:
               chr4:51605688-51605456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               73-325
               

               Cow position:
               chr4:60030831-60031068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               209, 46
               

               Conread position:
               80-348
               

               Cow position:
               chr4:22449587-22449336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               198, 43
               

               Conread position:
               123-326
               

               Cow position:
               chr4:52225961-52226169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               13, 101
               

               Conread position:
               156-302
               

               Cow position:
               chr4:9198960-9199106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 15
               

               Conread position:
               161-325
               

               Cow position:
               chr4:35471314-35471482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               169-323
               

               Cow position:
               chr4:34762326-34762173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               169-325
               

               Cow position:
               chr4:45115771-45115614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               112, 51
               

               Conread position:
               169-342
               

               Cow position:
               chr4:44279928-44279755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               110, 52
               

               Conread position:
               170-325
               

               Cow position:
               chr4:45234864-45234707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               170-355
               

               Cow position:
               chr4:51433419-51433605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               111, 48
               

               Conread position:
               174-308
               

               Cow position:
               chr4:26373660-26373529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               174-314
               

               Cow position:
               chr4:54797525-54797385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               174-325
               

               Cow position:
               chr4:2169080-2169233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr4:10836189-10836341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 144
               

               Conread position:
               174-325
               

               Cow position:
               chr4:24432992-24433144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               174-325
               

               Cow position:
               chr4:29709753-29709595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 41
               

               Conread position:
               174-332
               

               Cow position:
               chr4:18956645-18956493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               174-339
               

               Cow position:
               chr4:37035222-37035056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               110, 47
               

               Conread position:
               179-341
               

               Cow position:
               chr4:45871848-45871683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 116
               

               Conread position:
               182-334
               

               Cow position:
               chr4:30131357-30131512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 28
               

               Conread position:
               182-342
               

               Cow position:
               chr4:20599955-20600116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               99, 6
               

               Conread position:
               182-343
               

               Cow position:
               chr4:9800023-9800188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               191-327
               

               Cow position:
               chr4:21862842-21862703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               2-363
               

               Cow position:
               chr5:31660777-31660423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 125
               

               Conread position:
               6-341
               

               Cow position:
               chr5:29756211-29756551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               23-341
               

               Cow position:
               chr5:27419834-27419516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               23-347
               

               Cow position:
               chr5:48757834-48758162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 135
               

               Conread position:
               37-325
               

               Cow position:
               chr5:1950140-1949859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               38-322
               

               Cow position:
               chr5:30332871-30333146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 14
               

               Conread position:
               42-338
               

               Cow position:
               chr5:58320545-58320260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 119
               

               Conread position:
               43-332
               

               Cow position:
               chr5:58748698-58748973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               44-341
               

               Cow position:
               chr5:39695578-39695868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               44-343
               

               Cow position:
               chr5:39442223-39442512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               52-311
               

               Cow position:
               chr5:26595169-26594914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               15, 108
               

               Conread position:
               59-302
               

               Cow position:
               chr5:18553840-18554068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               64-323
               

               Cow position:
               chr5:23366816-23366572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 84
               

               Conread position:
               65-341
               

               Cow position:
               chr5:25899921-25899658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               66-243
               

               Cow position:
               chr5:35209524-35209362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               66-255
               

               Cow position:
               chr5:21535162-21534984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               66-277
               

               Cow position:
               chr5:4927614-4927418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               66-302
               

               Cow position:
               chr5:23536122-23536356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               66-302
               

               Cow position:
               chr5:27411445-27411225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               218, 40
               

               Conread position:
               66-302
               

               Cow position:
               chr5:54089985-54090213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 64
               

               Conread position:
               66-321
               

               Cow position:
               chr5:17267942-17267699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               203, 49
               

               Conread position:
               66-325
               

               Cow position:
               chr5:27102842-27102595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               66-325
               

               Cow position:
               chr5:34441839-34441582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 55
               

               Conread position:
               66-325
               

               Cow position:
               chr5:49945864-49946104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr5:17028045-17028301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               218, 88
               

               Conread position:
               66-332
               

               Cow position:
               chr5:41604577-41604829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               66-339
               

               Cow position:
               chr5:66189939-66190201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               66-346
               

               Cow position:
               chr5:31561486-31561748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 65
               

               Conread position:
               66-354
               

               Cow position:
               chr5:28946110-28945832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-371
               

               Cow position:
               chr5:23529328-23529039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               225, 65
               

               Conread position:
               67-325
               

               Cow position:
               chr5:29844232-29844479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               215, 48
               

               Conread position:
               67-328
               

               Cow position:
               chr5:7552465-7552219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               165, 84
               

               Conread position:
               76-323
               

               Cow position:
               chr5:36487734-36487498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               166, 60
               

               Conread position:
               76-348
               

               Cow position:
               chr5:15482996-15483257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               206, 39
               

               Conread position:
               80-325
               

               Cow position:
               chr5:34914589-34914358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               204, 49
               

               Conread position:
               80-325
               

               Cow position:
               chr5:48178421-48178183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               125, 35
               

               Conread position:
               150-326
               

               Cow position:
               chr5:18695182-18695355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               131, 154
               

               Conread position:
               156-339
               

               Cow position:
               chr5:47680990-47680802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               168-302
               

               Cow position:
               chr5:75687284-75687150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               113, 50
               

               Conread position:
               170-325
               

               Cow position:
               chr5:23527589-23527431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               170-325
               

               Cow position:
               chr5:62638946-62639103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               171-371
               

               Cow position:
               chr5:17097755-17097954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               174-313
               

               Cow position:
               chr5:61365577-61365723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               174-322
               

               Cow position:
               chr5:42316863-42316719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               174-323
               

               Cow position:
               chr5:58343905-58344055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               174-332
               

               Cow position:
               chr5:18276528-18276683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               107, 39
               

               Conread position:
               174-333
               

               Cow position:
               chr5:25681309-25681151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               174-338
               

               Cow position:
               chr5:21531059-21530892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-341
               

               Cow position:
               chr5:48573725-48573568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               176-325
               

               Cow position:
               chr5:63328844-63328701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               177-341
               

               Cow position:
               chr5:21195074-21194905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               179-337
               

               Cow position:
               chr5:27293618-27293457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 41
               

               Conread position:
               180-325
               

               Cow position:
               chr5:5929511-5929658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               180-342
               

               Cow position:
               chr5:3058971-3059133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               185-325
               

               Cow position:
               chr5:39134203-39134061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-764
               

               Cow position:
               chr6:32412739-32411988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               785
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 124
               

               Conread position:
               5-342
               

               Cow position:
               chr6:6596457-6596796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               6-323
               

               Cow position:
               chr6:4022987-4023312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               6-327
               

               Cow position:
               chr6:16625831-16626160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               23-317
               

               Cow position:
               chr6:16675712-16676013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               23-325
               

               Cow position:
               chr6:37612028-37612318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               43-332
               

               Cow position:
               chr6:53673804-53674080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               44-311
               

               Cow position:
               chr6:16733350-16733613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               23, 126
               

               Conread position:
               46-322
               

               Cow position:
               chr6:28164745-28165034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               59-341
               

               Cow position:
               chr6:35775032-35774754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               59-342
               

               Cow position:
               chr6:36194552-36194826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 70
               

               Conread position:
               62-324
               

               Cow position:
               chr6:37462980-37463235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               200, 56
               

               Conread position:
               65-340
               

               Cow position:
               chr6:14658565-14658828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               65-342
               

               Cow position:
               chr6:51294248-51294515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               65-353
               

               Cow position:
               chr6:33929587-33929312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               66-247
               

               Cow position:
               chr6:30474289-30474461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               66-277
               

               Cow position:
               chr6:51387716-51387912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               66-300
               

               Cow position:
               chr6:7173786-7173566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               215, 49
               

               Conread position:
               66-302
               

               Cow position:
               chr6:58331852-58332076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               66-323
               

               Cow position:
               chr6:24623008-24622768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               66-323
               

               Cow position:
               chr6:51840242-51840496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               66-325
               

               Cow position:
               chr6:55475219-55475468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               218, 77
               

               Conread position:
               66-330
               

               Cow position:
               chr6:510332-510087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               215, 55
               

               Conread position:
               66-332
               

               Cow position:
               chr6:36652385-36652637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               66-332
               

               Cow position:
               chr6:56376385-56376133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 78
               

               Conread position:
               66-332
               

               Cow position:
               chr6:65871858-65872106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               179, 40
               

               Conread position:
               66-333
               

               Cow position:
               chr6:48572917-48572662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 97
               

               Conread position:
               66-335
               

               Cow position:
               chr6:63197199-63196938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               225, 88
               

               Conread position:
               66-342
               

               Cow position:
               chr6:47026444-47026707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               225, 34
               

               Conread position:
               66-342
               

               Cow position:
               chr6:54479186-54478917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               55, 74
               

               Conread position:
               68-325
               

               Cow position:
               chr6:24545579-24545826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 87
               

               Conread position:
               80-341
               

               Cow position:
               chr6:13718742-13718993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               201, 74
               

               Conread position:
               88-325
               

               Cow position:
               chr6:2899585-2899353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               135-352
               

               Cow position:
               chr6:48806988-48806775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               90, 77
               

               Conread position:
               154-332
               

               Cow position:
               chr6:30701478-30701661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               168-320
               

               Cow position:
               chr6:10400359-10400208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 69
               

               Conread position:
               169-332
               

               Cow position:
               chr6:15782459-15782295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               112, 49
               

               Conread position:
               170-332
               

               Cow position:
               chr6:15943945-15943782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               170-332
               

               Cow position:
               chr6:64427281-64427445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               111, 50
               

               Conread position:
               171-332
               

               Cow position:
               chr6:31225764-31225927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               173-325
               

               Cow position:
               chr6:36454537-36454383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr6:53939024-53939176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               174-332
               

               Cow position:
               chr6:25224299-25224459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-332
               

               Cow position:
               chr6:38914503-38914660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               109, 14
               

               Conread position:
               174-342
               

               Cow position:
               chr6:46676367-46676202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               174-353
               

               Cow position:
               chr6:47192464-47192286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               174-354
               

               Cow position:
               chr6:12421231-12421050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               175-325
               

               Cow position:
               chr6:11790035-11790188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               175-325
               

               Cow position:
               chr6:20255349-20255194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 43
               

               Conread position:
               175-332
               

               Cow position:
               chr6:59496281-59496434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               176-342
               

               Cow position:
               chr6:49800329-49800495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               106, 114
               

               Conread position:
               179-332
               

               Cow position:
               chr6:36892265-36892114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               179-338
               

               Cow position:
               chr6:58765350-58765189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               182-332
               

               Cow position:
               chr6:41041988-41042136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               182-338
               

               Cow position:
               chr6:17232383-17232228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               182-342
               

               Cow position:
               chr6:37054054-37054213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               182-342
               

               Cow position:
               chr6:54144371-54144533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               183-325
               

               Cow position:
               chr6:53264728-53264589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               101, 34
               

               Conread position:
               183-342
               

               Cow position:
               chr6:7707202-7707361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               185-348
               

               Cow position:
               chr6:24649916-24650075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               186-322
               

               Cow position:
               chr6:39073785-39073923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 121
               

               Conread position:
               188-333
               

               Cow position:
               chr6:1732414-1732564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 121
               

               Conread position:
               190-332
               

               Cow position:
               chr6:1907596-1907739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               3-295
               

               Cow position:
               chr7:33772524-33772800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               6-325
               

               Cow position:
               chr7:24667280-24667599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               18-344
               

               Cow position:
               chr7:59245866-59246188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               23-323
               

               Cow position:
               chr7:12755240-12754943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               23-333
               

               Cow position:
               chr7:11872690-11872375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               23-377
               

               Cow position:
               chr7:7096138-7095778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               30-295
               

               Cow position:
               chr7:23256924-23256670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               38-345
               

               Cow position:
               chr7:20918413-20918110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               43-314
               

               Cow position:
               chr7:25445339-25445599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 93
               

               Conread position:
               49-347
               

               Cow position:
               chr7:19399729-19399448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               59-339
               

               Cow position:
               chr7:26195841-26195576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               219, 56
               

               Conread position:
               63-323
               

               Cow position:
               chr7:43234476-43234232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               218, 47
               

               Conread position:
               66-285
               

               Cow position:
               chr7:23177504-23177711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               66-301
               

               Cow position:
               chr7:45955895-45956120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-302
               

               Cow position:
               chr7:22981304-22981529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               218, 60
               

               Conread position:
               66-322
               

               Cow position:
               chr7:67761347-67761600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               66-323
               

               Cow position:
               chr7:8074134-8073889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               218, 48
               

               Conread position:
               66-325
               

               Cow position:
               chr7:10099393-10099146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               66-349
               

               Cow position:
               chr7:19881076-19880801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               215, 28
               

               Conread position:
               67-280
               

               Cow position:
               chr7:47771541-47771735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               67-317
               

               Cow position:
               chr7:51632872-51633104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               133, 59
               

               Conread position:
               67-332
               

               Cow position:
               chr7:27388009-27387756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               67-340
               

               Cow position:
               chr7:67839310-67839574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               69-342
               

               Cow position:
               chr7:24740869-24740610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               235, 52
               

               Conread position:
               71-302
               

               Cow position:
               chr7:1350384-1350165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               210, 71
               

               Conread position:
               71-338
               

               Cow position:
               chr7:25104339-25104599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 61
               

               Conread position:
               71-340
               

               Cow position:
               chr7:4512841-4512591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 87
               

               Conread position:
               77-325
               

               Cow position:
               chr7:12424522-12424761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               82-333
               

               Cow position:
               chr7:20109007-20108772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               151-301
               

               Cow position:
               chr7:61681599-61681444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               151-323
               

               Cow position:
               chr7:20081035-20080862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               140, 20
               

               Conread position:
               169-307
               

               Cow position:
               chr7:59713774-59713913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               112, 51
               

               Conread position:
               170-325
               

               Cow position:
               chr7:20467-20623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               114, 91
               

               Conread position:
               170-326
               

               Cow position:
               chr7:45748978-45748824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               170-332
               

               Cow position:
               chr7:13587240-13587402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 48
               

               Conread position:
               174-302
               

               Cow position:
               chr7:57311678-57311808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               174-325
               

               Cow position:
               chr7:51086218-51086371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-332
               

               Cow position:
               chr7:37444927-37445086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               175-332
               

               Cow position:
               chr7:24521318-24521471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               176-306
               

               Cow position:
               chr7:34027832-34027961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               176-340
               

               Cow position:
               chr7:62610355-62610520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               176-345
               

               Cow position:
               chr7:57577243-57577069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 166
               

               Conread position:
               182-332
               

               Cow position:
               chr7:53005419-53005569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               182-340
               

               Cow position:
               chr7:41728014-41728172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               97, 34
               

               Conread position:
               182-342
               

               Cow position:
               chr7:39603392-39603552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               186-325
               

               Cow position:
               chr7:66206664-66206804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 52
               

               Conread position:
               193-348
               

               Cow position:
               chr7:5220932-5221090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               6-302
               

               Cow position:
               chr8:50266152-50266450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               6-325
               

               Cow position:
               chr8:46850488-46850178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               6-346
               

               Cow position:
               chr8:6469287-6468964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               23-303
               

               Cow position:
               chr8:20892226-20892495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               23-321
               

               Cow position:
               chr8:26922511-26922800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               27-327
               

               Cow position:
               chr8:55829459-55829163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 114
               

               Conread position:
               38-308
               

               Cow position:
               chr8:9811708-9811967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               252, 28
               

               Conread position:
               38-323
               

               Cow position:
               chr8:13738411-13738692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               114, 24
               

               Conread position:
               39-302
               

               Cow position:
               chr8:59507168-59506916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               43-325
               

               Cow position:
               chr8:26228868-26229130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               45-323
               

               Cow position:
               chr8:19171705-19171438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               59-302
               

               Cow position:
               chr8:27294656-27294890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               63-301
               

               Cow position:
               chr8:49599993-49599765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               65-301
               

               Cow position:
               chr8:18368156-18367927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               226, 70
               

               Conread position:
               65-325
               

               Cow position:
               chr8:13813489-13813239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               214, 81
               

               Conread position:
               66-301
               

               Cow position:
               chr8:1107255-1107031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               66-302
               

               Cow position:
               chr8:32984167-32983941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               218, 87
               

               Conread position:
               66-321
               

               Cow position:
               chr8:43693148-43693387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               191, 92
               

               Conread position:
               66-322
               

               Cow position:
               chr8:13975829-13976070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               66-323
               

               Cow position:
               chr8:51905106-51904857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 84
               

               Conread position:
               66-325
               

               Cow position:
               chr8:55305016-55305265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               66-326
               

               Cow position:
               chr8:36505314-36505559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               213, 61
               

               Conread position:
               66-328
               

               Cow position:
               chr8:34287861-34288107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               66-340
               

               Cow position:
               chr8:49265369-49265102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               57, 90
               

               Conread position:
               66-345
               

               Cow position:
               chr8:32827739-32827474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 82
               

               Conread position:
               66-346
               

               Cow position:
               chr8:33219020-33218749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               66-354
               

               Cow position:
               chr8:28221627-28221359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               215, 64
               

               Conread position:
               67-302
               

               Cow position:
               chr8:60320457-60320677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               68-322
               

               Cow position:
               chr8:29935853-29936098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               68-325
               

               Cow position:
               chr8:37487362-37487114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               69-341
               

               Cow position:
               chr8:29413829-29414087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               70-322
               

               Cow position:
               chr8:8134561-8134322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               54, 90
               

               Conread position:
               82-325
               

               Cow position:
               chr8:9583592-9583361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               83-333
               

               Cow position:
               chr8:13810156-13810392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               40, 77
               

               Conread position:
               156-332
               

               Cow position:
               chr8:11594051-11594228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               128, 15
               

               Conread position:
               156-356
               

               Cow position:
               chr8:37122979-37123180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               170-325
               

               Cow position:
               chr8:61216808-61216651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               173-325
               

               Cow position:
               chr8:31645991-31645838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               173-332
               

               Cow position:
               chr8:37114881-37114723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               173-333
               

               Cow position:
               chr8:49576961-49577118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               109, 45
               

               Conread position:
               174-322
               

               Cow position:
               chr8:24426686-24426834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               108, 47
               

               Conread position:
               174-323
               

               Cow position:
               chr8:43803581-43803733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               174-325
               

               Cow position:
               chr8:15686372-15686218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               174-331
               

               Cow position:
               chr8:18743527-18743682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               175-299
               

               Cow position:
               chr8:49510861-49510743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               175-302
               

               Cow position:
               chr8:20832292-20832163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               175-322
               

               Cow position:
               chr8:39017737-39017885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               175-333
               

               Cow position:
               chr8:33510590-33510427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 147
               

               Conread position:
               175-339
               

               Cow position:
               chr8:60949711-60949544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               179-323
               

               Cow position:
               chr8:20682430-20682579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               179-333
               

               Cow position:
               chr8:18175968-18175814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               179-342
               

               Cow position:
               chr8:36274298-36274131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               182-332
               

               Cow position:
               chr8:36471580-36471730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               182-342
               

               Cow position:
               chr8:23030671-23030830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 124
               

               Conread position:
               182-348
               

               Cow position:
               chr8:56033836-56033665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               182-362
               

               Cow position:
               chr8:41318075-41318254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               184-325
               

               Cow position:
               chr8:13900439-13900583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               184-341
               

               Cow position:
               chr8:53866142-53866298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               184-342
               

               Cow position:
               chr8:11510321-11510160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 79
               

               Conread position:
               4-322
               

               Cow position:
               chr9:14184828-14184530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 59
               

               Conread position:
               7-332
               

               Cow position:
               chr9:42173008-42173337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               18-301
               

               Cow position:
               chr9:47926081-47925804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               23-325
               

               Cow position:
               chr9:55562661-55562353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               23-339
               

               Cow position:
               chr9:3959223-3958917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               43-376
               

               Cow position:
               chr9:18110741-18111060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               73, 93
               

               Conread position:
               48-333
               

               Cow position:
               chr9:17110891-17110619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 8
               

               Conread position:
               49-333
               

               Cow position:
               chr9:20200414-20200147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 6
               

               Conread position:
               59-341
               

               Cow position:
               chr9:15006637-15006905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               59-346
               

               Cow position:
               chr9:8599716-8599442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               5, 58
               

               Conread position:
               66-280
               

               Cow position:
               chr9:4858641-4858440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               66-280
               

               Cow position:
               chr9:34106824-34106617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               154, 31
               

               Conread position:
               66-324
               

               Cow position:
               chr9:34204234-34203987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               66-325
               

               Cow position:
               chr9:15684682-15684930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               66-325
               

               Cow position:
               chr9:33668832-33668582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               66-325
               

               Cow position:
               chr9:42037758-42037510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               66-332
               

               Cow position:
               chr9:39428694-39428950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 85
               

               Conread position:
               66-342
               

               Cow position:
               chr9:9823403-9823658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               66-342
               

               Cow position:
               chr9:50544525-50544799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               66-344
               

               Cow position:
               chr9:5575421-5575155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               145, 56
               

               Conread position:
               67-338
               

               Cow position:
               chr9:29808558-29808298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               68-287
               

               Cow position:
               chr9:3932062-3931859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               68-325
               

               Cow position:
               chr9:37099131-37099367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               69-301
               

               Cow position:
               chr9:3169419-3169642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               213, 67
               

               Conread position:
               70-329
               

               Cow position:
               chr9:28983283-28983035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               214, 65
               

               Conread position:
               77-332
               

               Cow position:
               chr9:4538765-4539009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               78-332
               

               Cow position:
               chr9:40007949-40007712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               82-345
               

               Cow position:
               chr9:27292189-27292440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               199, 36
               

               Conread position:
               89-325
               

               Cow position:
               chr9:26646009-26645777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               121-325
               

               Cow position:
               chr9:62330936-62331141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               163, 97
               

               Conread position:
               156-325
               

               Cow position:
               chr9:26559584-26559757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               167-302
               

               Cow position:
               chr9:53370177-53370307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               169-322
               

               Cow position:
               chr9:12499024-12498870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               170-348
               

               Cow position:
               chr9:41958773-41958944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               173, 74
               

               Conread position:
               171-342
               

               Cow position:
               chr9:27052622-27052792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 158
               

               Conread position:
               173-302
               

               Cow position:
               chr9:2863453-2863324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               107, 45
               

               Conread position:
               174-325
               

               Cow position:
               chr9:47931125-47930969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               174-332
               

               Cow position:
               chr9:8657422-8657581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 46
               

               Conread position:
               174-332
               

               Cow position:
               chr9:34431829-34431670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 76
               

               Conread position:
               174-342
               

               Cow position:
               chr9:10667017-10667183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               153, 8
               

               Conread position:
               175-325
               

               Cow position:
               chr9:53794521-53794671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               106, 48
               

               Conread position:
               175-326
               

               Cow position:
               chr9:38580862-38580714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               175-344
               

               Cow position:
               chr9:60549404-60549573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               109, 152
               

               Conread position:
               180-332
               

               Cow position:
               chr9:32266385-32266536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               182-323
               

               Cow position:
               chr9:20839629-20839487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 32
               

               Conread position:
               182-328
               

               Cow position:
               chr9:33059271-33059418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               182-332
               

               Cow position:
               chr9:35708618-35708769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               109, 36
               

               Conread position:
               182-338
               

               Cow position:
               chr9:19382331-19382172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               2-302
               

               Cow position:
               chrX:41733327-41733021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               22, 114
               

               Conread position:
               6-345
               

               Cow position:
               chrX:7425340-7425688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               23-345
               

               Cow position:
               chrX:6203448-6203758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               24-325
               

               Cow position:
               chrX:18287169-18286883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               42, 15
               

               Conread position:
               44-341
               

               Cow position:
               chrX:25713723-25714013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               49-306
               

               Cow position:
               chrX:2300858-2301106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               63-322
               

               Cow position:
               chrX:18142505-18142263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               62, 74
               

               Conread position:
               63-342
               

               Cow position:
               chrX:36840820-36841078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               66-257
               

               Cow position:
               chrX:13323044-13322860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               66-280
               

               Cow position:
               chrX:7497193-7497390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               66-302
               

               Cow position:
               chrX:32310056-32310284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               66-302
               

               Cow position:
               chrX:43426245-43426472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               66-310
               

               Cow position:
               chrX:630355-630123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               212, 49
               

               Conread position:
               66-321
               

               Cow position:
               chrX:29408072-29407828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               66-332
               

               Cow position:
               chrX:21664769-21664518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               66-332
               

               Cow position:
               chrX:25338138-25338391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               66-332
               

               Cow position:
               chrX:32431574-32431826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               56, 89
               

               Conread position:
               66-336
               

               Cow position:
               chrX:20376921-20377174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               66-339
               

               Cow position:
               chrX:2786605-2786348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               67-323
               

               Cow position:
               chrX:27771621-27771380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               68-325
               

               Cow position:
               chrX:36009957-36009716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               215, 50
               

               Conread position:
               69-302
               

               Cow position:
               chrX:17630850-17630624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 75
               

               Conread position:
               70-325
               

               Cow position:
               chrX:42011236-42011481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               214, 82
               

               Conread position:
               71-330
               

               Cow position:
               chrX:6041254-6041009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               76-314
               

               Cow position:
               chrX:35759976-35759747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               38, 70
               

               Conread position:
               84-297
               

               Cow position:
               chrX:27176345-27176142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               168-345
               

               Cow position:
               chrX:29056330-29056508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               169-311
               

               Cow position:
               chrX:10289584-10289444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 49
               

               Conread position:
               170-311
               

               Cow position:
               chrX:12304604-12304746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               170-325
               

               Cow position:
               chrX:17964479-17964326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               99, 135
               

               Conread position:
               171-303
               

               Cow position:
               chrX:3951084-3951218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 48
               

               Conread position:
               173-376
               

               Cow position:
               chrX:46028715-46028515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               174-307
               

               Cow position:
               chrX:17042730-17042864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               107, 43
               

               Conread position:
               174-321
               

               Cow position:
               chrX:29761637-29761488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               174-329
               

               Cow position:
               chrX:16291972-16291814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               107, 41
               

               Conread position:
               174-332
               

               Cow position:
               chrX:41083962-41084123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               174-339
               

               Cow position:
               chrX:28835715-28835543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 138
               

               Conread position:
               174-343
               

               Cow position:
               chrX:29874323-29874157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               174-355
               

               Cow position:
               chrX:39339058-39338878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 131
               

               Conread position:
               175-324
               

               Cow position:
               chrX:23179231-23179083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               122, 43
               

               Conread position:
               176-313
               

               Cow position:
               chrX:46146224-46146088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               105, 13
               

               Conread position:
               179-323
               

               Cow position:
               chrX:488731-488873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               181-325
               

               Cow position:
               chrX:30483955-30483810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               97, 114
               

               Conread position:
               182-325
               

               Cow position:
               chrX:17952920-17952776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               182-339
               

               Cow position:
               chrX:26619062-26618901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 38
               

               Conread position:
               183-341
               

               Cow position:
               chrX:37186218-37186373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               189-342
               

               Cow position:
               chrX:29675561-29675718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               76, 28
Conread position:	3-325
Cow position:	chr1:97622356-97622042 (view UCSC Genome Browser custom track)
Alignm length:	335
Alignm identity:	233
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	20, 41
Conread position:	23-332
Cow position:	chr1:13195552-13195249 (view UCSC Genome Browser custom track)
Alignm length:	318
Alignm identity:	211
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	26, 11
Conread position:	38-287
Cow position:	chr1:29916316-29916552 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	180
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	80, 14
Conread position:	38-297
Cow position:	chr1:41735717-41735470 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	184
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	76, 24
Conread position:	43-346
Cow position:	chr1:20581848-20582143 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	217
Alignm E-value:	8e-32
Alignm gaps (pig, cow):	18, 86
Conread position:	44-321
Cow position:	chr1:80764627-80764361 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	194
Alignm E-value:	6e-30
Alignm gaps (pig, cow):	23, 15
Conread position:	44-323
Cow position:	chr1:22777635-22777367 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	198
Alignm E-value:	9e-33
Alignm gaps (pig, cow):	23, 72
Conread position:	46-322
Cow position:	chr1:2765326-2765576 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	195
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	11, 0
Conread position:	62-311
Cow position:	chr1:81161930-81162178 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	173
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	104, 28
Conread position:	63-322
Cow position:	chr1:71136079-71136325 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	193
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	60, 88
Conread position:	63-332
Cow position:	chr1:21679082-21679333 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	191
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	51, 64
Conread position:	65-322
Cow position:	chr1:70389358-70389624 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	182
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	58, 175
Conread position:	65-325
Cow position:	chr1:61737026-61737274 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	178
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	228, 57
Conread position:	65-332
Cow position:	chr1:59650198-59650455 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	183
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	11, 21
Conread position:	66-260
Cow position:	chr1:63038171-63038356 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	138
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	57, 82
Conread position:	66-297
Cow position:	chr1:75347554-75347775 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	172
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	48, 66
Conread position:	66-301
Cow position:	chr1:31390659-31390433 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	168
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	132, 79
Conread position:	66-322
Cow position:	chr1:28678453-28678698 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	184
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	51, 11
Conread position:	66-323
Cow position:	chr1:95765157-95764917 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	182
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	213, 56
Conread position:	66-325
Cow position:	chr1:15902424-15902673 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	188
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	40, 68