Cow genome map
| Conread name: | Tra1-TCH01C100079 |
| Conread position: | 1-287 |
| Cow position: | chr1:97045493-97045193 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 255 |
| Conread position: | 1-421 |
| Cow position: | chr1:79921005-79920584 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 1-453 |
| Cow position: | chr1:66686816-66686350 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 89 |
| Conread position: | 12-421 |
| Cow position: | chr1:40307800-40308205 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 16-421 |
| Cow position: | chr1:40684953-40684548 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 16-424 |
| Cow position: | chr1:40053091-40053501 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 118 |
| Conread position: | 26-453 |
| Cow position: | chr1:78919876-78920287 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 206 |
| Conread position: | 40-320 |
| Cow position: | chr1:85533645-85533370 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 177 |
| Conread position: | 40-398 |
| Cow position: | chr1:28872838-28873193 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 76, 215 |
| Conread position: | 48-453 |
| Cow position: | chr1:21362713-21362313 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 57, 106 |
| Conread position: | 85-398 |
| Cow position: | chr1:101858177-101857864 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 85-421 |
| Cow position: | chr1:61308808-61309145 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 167 |
| Conread position: | 98-401 |
| Cow position: | chr1:88376771-88376487 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 630-860 |
| Cow position: | chr1:78922323-78922564 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 639-795 |
| Cow position: | chr1:97044326-97044171 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 134 |
| Conread position: | 649-856 |
| Cow position: | chr1:88376198-88375986 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 1-448 |
| Cow position: | chr10:19723300-19722850 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 13-454 |
| Cow position: | chr10:16475519-16475969 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 34-320 |
| Cow position: | chr10:40460518-40460800 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 124-320 |
| Cow position: | chr10:54962463-54962277 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 643-859 |
| Cow position: | chr10:19722627-19722411 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 6 |
| Conread position: | 643-860 |
| Cow position: | chr10:50312348-50312576 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 650-860 |
| Cow position: | chr10:54960970-54960752 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-244 |
| Cow position: | chr11:61707627-61707365 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-453 |
| Cow position: | chr11:26566334-26565872 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 3-453 |
| Cow position: | chr11:14730134-14729682 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 11-297 |
| Cow position: | chr11:1500943-1500652 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 117-320 |
| Cow position: | chr11:21624840-21625050 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 130-428 |
| Cow position: | chr11:10049638-10049931 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 169, 64 |
| Conread position: | 662-859 |
| Cow position: | chr11:14729447-14729241 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 16-421 |
| Cow position: | chr13:17307945-17308345 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 22-421 |
| Cow position: | chr13:4872548-4872947 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 39-312 |
| Cow position: | chr13:57023032-57023301 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 153 |
| Conread position: | 149-325 |
| Cow position: | chr13:38538126-38537952 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 655-860 |
| Cow position: | chr13:28672475-28672261 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-453 |
| Cow position: | chr14:47640472-47640929 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 9-453 |
| Cow position: | chr14:21742936-21743390 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 235 |
| Conread position: | 651-859 |
| Cow position: | chr14:21743581-21743792 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 732-859 |
| Cow position: | chr14:47641200-47641323 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 11-321 |
| Cow position: | chr15:4109566-4109270 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 185, 17 |
| Conread position: | 16-420 |
| Cow position: | chr15:2648318-2647909 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 121 |
| Conread position: | 640-860 |
| Cow position: | chr15:21950516-21950288 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 185 |
| Conread position: | 135-428 |
| Cow position: | chr16:29982555-29982861 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 640-847 |
| Cow position: | chr16:29983107-29983321 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 643-842 |
| Cow position: | chr16:45797858-45798060 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 1-421 |
| Cow position: | chr17:20666169-20665748 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 643-858 |
| Cow position: | chr17:11026973-11026750 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 56, 177 |
| Conread position: | 1-428 |
| Cow position: | chr18:15854796-15855229 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 65 |
| Conread position: | 86-320 |
| Cow position: | chr18:29070112-29070334 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 150, 26 |
| Conread position: | 105-320 |
| Cow position: | chr19:10517230-10517018 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 120 |
| Conread position: | 105-448 |
| Cow position: | chr19:35979142-35979491 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 191, 10 |
| Conread position: | 1-395 |
| Cow position: | chr2:47851908-47851523 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 31, 198 |
| Conread position: | 1-421 |
| Cow position: | chr2:51991318-51990898 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 9-303 |
| Cow position: | chr2:39628830-39629117 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 16-421 |
| Cow position: | chr2:26920918-26921328 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 122 |
| Conread position: | 22-320 |
| Cow position: | chr2:5519759-5519454 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 213 |
| Conread position: | 39-320 |
| Cow position: | chr2:49816067-49816342 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 57 |
| Conread position: | 72-226 |
| Cow position: | chr2:54731376-54731221 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 88-298 |
| Cow position: | chr2:34565628-34565418 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 120-288 |
| Cow position: | chr2:11680699-11680862 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-284 |
| Cow position: | chr20:13577319-13577042 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 643-860 |
| Cow position: | chr20:28463894-28464112 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 7 |
| Conread position: | 1-421 |
| Cow position: | chr21:12056152-12055735 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 1-453 |
| Cow position: | chr21:1691010-1690543 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 74 |
| Conread position: | 16-428 |
| Cow position: | chr21:37044774-37045183 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 16-453 |
| Cow position: | chr21:21945257-21944812 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 40 |
| Conread position: | 38-420 |
| Cow position: | chr21:4222805-4222422 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 182 |
| Conread position: | 112-320 |
| Cow position: | chr21:39086124-39086333 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 108, 74 |
| Conread position: | 148-313 |
| Cow position: | chr21:49323748-49323908 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 648-860 |
| Cow position: | chr21:21944590-21944373 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 118 |
| Conread position: | 705-859 |
| Cow position: | chr21:1690039-1689882 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 103 |
| Conread position: | 82-320 |
| Cow position: | chr22:302229-301994 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 214, 32 |
| Conread position: | 1-398 |
| Cow position: | chr23:25846973-25847361 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 1-448 |
| Cow position: | chr23:22945393-22944943 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 648-860 |
| Cow position: | chr23:22944698-22944478 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 662-860 |
| Cow position: | chr23:5401849-5402054 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 104 |
| Conread position: | 1-421 |
| Cow position: | chr24:22792935-22793351 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 13-223 |
| Cow position: | chr24:8584915-8585121 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 18-453 |
| Cow position: | chr24:6515263-6514825 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 22-428 |
| Cow position: | chr24:9188954-9188545 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 14-453 |
| Cow position: | chr25:24218381-24217943 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 10-421 |
| Cow position: | chr26:12588820-12588408 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 106, 113 |
| Conread position: | 22-421 |
| Cow position: | chr26:11254303-11253900 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 212 |
| Conread position: | 38-267 |
| Cow position: | chr26:17997234-17997012 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 38-398 |
| Cow position: | chr26:5551549-5551907 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 155 |
| Conread position: | 85-421 |
| Cow position: | chr26:18854908-18855245 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 696-855 |
| Cow position: | chr26:17996529-17996368 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 118 |
| Conread position: | 16-453 |
| Cow position: | chr27:25160381-25160827 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 110 |
| Conread position: | 16-422 |
| Cow position: | chr28:24587167-24587573 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 33-320 |
| Cow position: | chr28:5378225-5378508 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 67, 76 |
| Conread position: | 40-298 |
| Cow position: | chr28:9262903-9263153 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 672-860 |
| Cow position: | chr28:10871964-10872159 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 1-298 |
| Cow position: | chr29:3178289-3177994 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 26 |
| Conread position: | 1-398 |
| Cow position: | chr29:30261747-30261346 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 1-428 |
| Cow position: | chr29:27250650-27250223 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 94-443 |
| Cow position: | chr29:27654487-27654156 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 205, 17 |
| Conread position: | 148-298 |
| Cow position: | chr29:13669471-13669323 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 639-860 |
| Cow position: | chr29:4056525-4056756 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 60, 163 |
| Conread position: | 36-231 |
| Cow position: | chr3:11787827-11787641 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 38-426 |
| Cow position: | chr3:54785413-54785794 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 15 |
| Conread position: | 105-453 |
| Cow position: | chr3:42630720-42631075 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 114-321 |
| Cow position: | chr3:75176897-75176697 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 672-860 |
| Cow position: | chr3:54786072-54786265 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 183 |
| Conread position: | 723-860 |
| Cow position: | chr3:11787060-11786923 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-401 |
| Cow position: | chr4:38903621-38904008 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 116-320 |
| Cow position: | chr4:14375747-14375547 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 647-859 |
| Cow position: | chr4:38904299-38904521 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 3-421 |
| Cow position: | chr5:27909766-27909352 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 38-311 |
| Cow position: | chr5:51771808-51771533 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 91 |
| Conread position: | 108-428 |
| Cow position: | chr5:32310359-32310039 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 133 |
| Conread position: | 111-398 |
| Cow position: | chr5:14659479-14659197 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 696-860 |
| Cow position: | chr5:32309771-32309604 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-313 |
| Cow position: | chr6:34440761-34441074 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 40, 129 |
| Conread position: | 6-443 |
| Cow position: | chr6:12528480-12528927 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 122 |
| Conread position: | 9-307 |
| Cow position: | chr6:61598707-61598409 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 133 |
| Conread position: | 19-443 |
| Cow position: | chr6:14763554-14763128 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 63-265 |
| Cow position: | chr6:16518933-16518733 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 200, 49 |
| Conread position: | 85-428 |
| Cow position: | chr6:331740-331399 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 118-442 |
| Cow position: | chr6:17931884-17932206 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 135-443 |
| Cow position: | chr6:57302262-57302572 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 232, 39 |
| Conread position: | 663-860 |
| Cow position: | chr6:33900272-33900068 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 676-847 |
| Cow position: | chr6:14762897-14762715 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 1-243 |
| Cow position: | chr7:5206665-5206912 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-446 |
| Cow position: | chr7:62443013-62442560 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 30 |
| Conread position: | 643-860 |
| Cow position: | chr7:7211972-7211757 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 652-860 |
| Cow position: | chr7:62441310-62441088 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-177 |
| Cow position: | chr8:8303557-8303730 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 1-421 |
| Cow position: | chr8:22572377-22571957 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 1-453 |
| Cow position: | chr8:37501231-37501676 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 201-453 |
| Cow position: | chr8:8307159-8307417 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 649-835 |
| Cow position: | chr8:8307648-8307844 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-231 |
| Cow position: | chr9:35318145-35317921 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 1-401 |
| Cow position: | chr9:31194596-31194195 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 1-421 |
| Cow position: | chr9:45473842-45473420 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 1-448 |
| Cow position: | chr9:9331152-9330698 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 14-421 |
| Cow position: | chr9:36724085-36724494 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 38-430 |
| Cow position: | chr9:4655042-4654654 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 72 |
| Conread position: | 85-404 |
| Cow position: | chr9:1076544-1076224 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 640-813 |
| Cow position: | chr9:3226756-3226578 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 643-847 |
| Cow position: | chr9:9330506-9330304 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 649-860 |
| Cow position: | chr9:45473131-45472916 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 142 |
| Conread position: | 1-421 |
| Cow position: | chrX:24088879-24089299 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 223 |
| Conread position: | 1-453 |
| Cow position: | chrX:3398362-3397909 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 161 |
| Conread position: | 3-453 |
| Cow position: | chrX:17250845-17250393 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 14-321 |
| Cow position: | chrX:33704734-33705036 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 16-297 |
| Cow position: | chrX:15252466-15252183 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 97-421 |
| Cow position: | chrX:18660209-18659885 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 101-320 |
| Cow position: | chrX:16223307-16223094 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 107-311 |
| Cow position: | chrX:22514574-22514371 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 114-401 |
| Cow position: | chrX:34344148-34344430 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 647-860 |
| Cow position: | chrX:17250181-17249959 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 49, 80 |