Cow genome map
| Conread name: | Tra1-TCH01F050029 |
| Conread position: | 222-463 |
| Cow position: | chr10:5289264-5289501 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 136, 13 |
| Conread position: | 235-463 |
| Cow position: | chr10:44838689-44838919 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 190, 40 |
| Conread position: | 261-472 |
| Cow position: | chr10:51099869-51099656 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 55 |
| Conread position: | 263-470 |
| Cow position: | chr10:34539620-34539834 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 263-473 |
| Cow position: | chr10:29853110-29852897 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 241-457 |
| Cow position: | chr11:15064173-15064391 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 26 |
| Conread position: | 243-472 |
| Cow position: | chr11:63932947-63932714 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 248-432 |
| Cow position: | chr11:59053652-59053474 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 239-474 |
| Cow position: | chr13:38426713-38426484 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 263-472 |
| Cow position: | chr14:6081963-6082174 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 243-455 |
| Cow position: | chr15:4530781-4530995 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 173, 60 |
| Conread position: | 237-474 |
| Cow position: | chr16:22587269-22587026 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 261-484 |
| Cow position: | chr16:24936204-24935984 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 104, 6 |
| Conread position: | 276-466 |
| Cow position: | chr16:2814242-2814431 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 240-432 |
| Cow position: | chr17:37762035-37762230 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 244-467 |
| Cow position: | chr18:30516825-30516597 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 235-445 |
| Cow position: | chr19:12563281-12563072 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 115, 7 |
| Conread position: | 236-467 |
| Cow position: | chr19:3835771-3836010 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 264-446 |
| Cow position: | chr19:36051527-36051340 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 232-474 |
| Cow position: | chr2:34281773-34282017 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 239-463 |
| Cow position: | chr2:81439724-81439955 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 241-480 |
| Cow position: | chr2:72102692-72102937 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 117, 204 |
| Conread position: | 243-458 |
| Cow position: | chr2:46311564-46311346 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 111, 24 |
| Conread position: | 258-467 |
| Cow position: | chr2:66056992-66056777 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 261-424 |
| Cow position: | chr2:81010084-81010248 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 267-478 |
| Cow position: | chr2:39602996-39602786 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 183 |
| Conread position: | 242-422 |
| Cow position: | chr20:6109019-6108838 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 243-473 |
| Cow position: | chr20:23112566-23112331 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 1-507 |
| Cow position: | chr21:47011314-47011826 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 224 |
| Conread position: | 503-740 |
| Cow position: | chr21:47012193-47012431 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 104 |
| Conread position: | 258-470 |
| Cow position: | chr22:34362495-34362285 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 167, 71 |
| Conread position: | 267-481 |
| Cow position: | chr22:28081433-28081654 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 258-445 |
| Cow position: | chr23:35401989-35402179 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 166, 92 |
| Conread position: | 273-481 |
| Cow position: | chr24:19524780-19524566 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 256-414 |
| Cow position: | chr28:34779191-34779350 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 241-472 |
| Cow position: | chr3:72402373-72402610 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 146 |
| Conread position: | 235-470 |
| Cow position: | chr5:37401721-37401963 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 141 |
| Conread position: | 245-456 |
| Cow position: | chr5:50226389-50226604 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 105, 98 |
| Conread position: | 258-464 |
| Cow position: | chr5:38874494-38874284 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 263-485 |
| Cow position: | chr6:52271884-52272109 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 85 |
| Conread position: | 240-436 |
| Cow position: | chr7:50441763-50441571 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 263-472 |
| Cow position: | chr7:16529370-16529586 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 220-442 |
| Cow position: | chr8:14601282-14601510 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 135 |
| Conread position: | 258-415 |
| Cow position: | chr8:34573061-34572902 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 232-477 |
| Cow position: | chr9:32724884-32724635 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 194, 76 |
| Conread position: | 224-458 |
| Cow position: | chrX:41193465-41193701 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 129, 11 |
| Conread position: | 238-463 |
| Cow position: | chrX:17050080-17049853 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 243-460 |
| Cow position: | chrX:42028651-42028434 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 69 |