Cow genome map
| Conread name: | Utr1-UTR010020A06 |
| Conread position: | 4-259 |
| Cow position: | chr10:21077255-21077522 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 4-485 |
| Cow position: | chr10:64302405-64301889 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 413 |
| Conread position: | 26-644 |
| Cow position: | chr10:38545521-38544879 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 33-266 |
| Cow position: | chr10:3542823-3542592 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 60-644 |
| Cow position: | chr11:27059051-27058445 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 382 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 63-626 |
| Cow position: | chr11:9734598-9734020 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 63-644 |
| Cow position: | chr12:11098601-11099200 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 45 |
| Conread position: | 63-644 |
| Cow position: | chr13:32737687-32737078 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 1-299 |
| Cow position: | chr14:34043708-34043415 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 29-467 |
| Cow position: | chr15:6623072-6623533 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 33-584 |
| Cow position: | chr15:7234285-7234824 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 22 |
| Conread position: | 46-335 |
| Cow position: | chr15:7787710-7787417 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 60-267 |
| Cow position: | chr15:19817979-19818181 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 63-645 |
| Cow position: | chr15:28490132-28489525 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 73-645 |
| Cow position: | chr16:28437710-28437111 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 45-461 |
| Cow position: | chr17:15384506-15384946 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 63-267 |
| Cow position: | chr20:8003811-8003608 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 43 |
| Conread position: | 63-267 |
| Cow position: | chr20:28161185-28161389 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 63-644 |
| Cow position: | chr20:5535352-5535958 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 63-644 |
| Cow position: | chr20:29948916-29949527 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 32-625 |
| Cow position: | chr21:23603053-23603661 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 63-349 |
| Cow position: | chr21:23812707-23813007 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 2-281 |
| Cow position: | chr22:36580518-36580227 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 29-283 |
| Cow position: | chr22:6502807-6502557 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 60-281 |
| Cow position: | chr22:35942426-35942207 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 63-645 |
| Cow position: | chr22:10909479-10908870 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 63-645 |
| Cow position: | chr22:18027633-18028248 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 105-347 |
| Cow position: | chr22:36591096-36590853 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 167, 67 |
| Conread position: | 228-626 |
| Cow position: | chr22:11804537-11804108 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 46, 323 |
| Conread position: | 33-283 |
| Cow position: | chr23:1024692-1024435 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 33-377 |
| Cow position: | chr23:16616514-16616153 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 63-641 |
| Cow position: | chr23:36031015-36030415 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 63-645 |
| Cow position: | chr23:4360183-4360774 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 55-644 |
| Cow position: | chr24:38637980-38638590 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 63-251 |
| Cow position: | chr24:14333912-14334100 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 10-583 |
| Cow position: | chr25:40918814-40918225 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 159 |
| Conread position: | 63-641 |
| Cow position: | chr26:30783160-30783776 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 33-645 |
| Cow position: | chr27:15541654-15542297 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 63-645 |
| Cow position: | chr27:16034040-16033425 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 38-277 |
| Cow position: | chr28:5801374-5801614 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 63-267 |
| Cow position: | chr28:2083999-2084203 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 63-349 |
| Cow position: | chr28:7822656-7822959 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 63-418 |
| Cow position: | chr28:1953528-1953919 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 63-490 |
| Cow position: | chr28:2988836-2988375 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 63-627 |
| Cow position: | chr28:24589250-24589847 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 63-641 |
| Cow position: | chr28:3191841-3191246 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 63-645 |
| Cow position: | chr28:6538863-6538251 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 347-644 |
| Cow position: | chr28:3020001-3019705 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 64, 165 |
| Conread position: | 55-436 |
| Cow position: | chr29:16016416-16016004 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 63-282 |
| Cow position: | chr29:3045997-3046216 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 63-315 |
| Cow position: | chr29:32540181-32540443 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 63-644 |
| Cow position: | chr29:9643387-9642784 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 33-626 |
| Cow position: | chr4:18424467-18423843 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 34-281 |
| Cow position: | chr4:19093485-19093731 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 55-281 |
| Cow position: | chr4:19251641-19251860 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 88, 51 |
| Conread position: | 55-645 |
| Cow position: | chr4:44925432-44924823 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 102 |
| Conread position: | 60-281 |
| Cow position: | chr4:1496300-1496084 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 60-281 |
| Cow position: | chr4:4176881-4177102 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 40, 108 |
| Conread position: | 60-401 |
| Cow position: | chr4:16359972-16360330 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 33-617 |
| Cow position: | chr5:6588868-6588255 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 63-286 |
| Cow position: | chr5:26084392-26084169 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 63-644 |
| Cow position: | chr5:57482358-57481744 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 484 |
| Conread position: | 2-347 |
| Cow position: | chr6:31637297-31636951 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 158 |
| Conread position: | 19-293 |
| Cow position: | chr6:65914481-65914752 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 33-644 |
| Cow position: | chr6:13104352-13104993 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 60-613 |
| Cow position: | chr6:10631378-10631948 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 33-644 |
| Cow position: | chr7:21127272-21126636 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 45-641 |
| Cow position: | chr7:41875868-41875255 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 63-267 |
| Cow position: | chr7:446211-446009 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 5 |
| Conread position: | 149-645 |
| Cow position: | chr7:27101793-27101268 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 402 |
| Conread position: | 4-645 |
| Cow position: | chr8:38585782-38585128 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 193 |
| Conread position: | 60-456 |
| Cow position: | chr8:16086950-16087356 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 60-645 |
| Cow position: | chr8:38577779-38577183 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 123 |
| Conread position: | 103-522 |
| Cow position: | chr8:25376404-25376854 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 33-416 |
| Cow position: | chr9:6830280-6829871 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 33-631 |
| Cow position: | chr9:37162583-37161961 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 45-281 |
| Cow position: | chr9:42556162-42556400 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 45-645 |
| Cow position: | chr9:50790947-50791578 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 59-336 |
| Cow position: | chr9:3393361-3393070 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 168 |
| Conread position: | 63-644 |
| Cow position: | chr9:34722168-34722772 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 63-649 |
| Cow position: | chr9:44818437-44819026 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 411 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 64-424 |
| Cow position: | chr9:59511643-59512019 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 64-641 |
| Cow position: | chr9:27034939-27035544 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 63-645 |
| Cow position: | chrX:8479807-8480421 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 69-645 |
| Cow position: | chrX:12353404-12354013 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 75-348 |
| Cow position: | chrX:28871005-28870734 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 32 |