Cow genome map

Conread name: Utr1-UTR010030H11

Conread position: 4-207
Cow position: chr1:40647044-40646840 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 195

Conread position: 23-161
Cow position: chr1:23191883-23191742 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 3-181
Cow position: chr10:52830992-52831164 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 23

Conread position: 4-191
Cow position: chr10:6011396-6011585 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 10-186
Cow position: chr10:49271623-49271446 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 21-188
Cow position: chr10:39861383-39861547 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 83, 17

Conread position: 44-183
Cow position: chr10:16522314-16522173 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 4-172
Cow position: chr11:21500055-21499887 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-191
Cow position: chr11:15993374-15993185 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 41, 35

Conread position: 16-165
Cow position: chr11:44402173-44402021 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 1-182
Cow position: chr12:42125840-42125658 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 103, 65

Conread position: 3-183
Cow position: chr13:42280995-42280810 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 4-183
Cow position: chr13:2952462-2952282 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 83

Conread position: 4-163
Cow position: chr14:1210839-1210997 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 22

Conread position: 4-183
Cow position: chr14:34692007-34692187 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 142

Conread position: 4-194
Cow position: chr14:38639578-38639766 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 51

Conread position: 22-177
Cow position: chr14:10103298-10103455 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 136

Conread position: 49-183
Cow position: chr14:38044573-38044437 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 4-191
Cow position: chr15:22452703-22452512 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 5-183
Cow position: chr15:31671640-31671461 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 85

Conread position: 3-190
Cow position: chr16:47790487-47790299 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 57

Conread position: 3-191
Cow position: chr16:29310839-29310656 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 35

Conread position: 5-188
Cow position: chr16:28763066-28763245 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 115

Conread position: 28-183
Cow position: chr16:8822536-8822383 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 61

Conread position: 44-183
Cow position: chr17:7052707-7052848 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 93

Conread position: 28-192
Cow position: chr18:53597255-53597094 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-756
Cow position: chr19:42967230-42966469 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 44

Conread position: 26-191
Cow position: chr19:7167218-7167384 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 3-192
Cow position: chr2:28379837-28379651 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 12

Conread position: 4-173
Cow position: chr2:37132636-37132464 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 4-194
Cow position: chr2:14589500-14589305 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 22-191
Cow position: chr2:15347568-15347397 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 3-190
Cow position: chr20:24085173-24084983 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 4-166
Cow position: chr20:2419963-2419803 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 117

Conread position: 5-182
Cow position: chr20:4007298-4007120 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 141

Conread position: 16-194
Cow position: chr20:30395470-30395651 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 4-183
Cow position: chr21:6053130-6053308 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 118

Conread position: 10-191
Cow position: chr21:25819584-25819402 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 32

Conread position: 24-183
Cow position: chr22:29504530-29504371 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-192
Cow position: chr23:29945456-29945645 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 138

Conread position: 4-192
Cow position: chr23:20184579-20184766 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 118

Conread position: 63-191
Cow position: chr23:10185446-10185316 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 3-190
Cow position: chr24:39360356-39360170 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 70

Conread position: 4-191
Cow position: chr24:17292834-17293023 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 1-194
Cow position: chr25:11962391-11962195 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 72

Conread position: 3-192
Cow position: chr25:13754452-13754255 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 4-159
Cow position: chr25:13211381-13211226 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 13

Conread position: 4-191
Cow position: chr25:6694-6506 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 155

Conread position: 15-168
Cow position: chr26:1414490-1414338 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 3-188
Cow position: chr27:18190481-18190665 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 118

Conread position: 4-178
Cow position: chr27:17908967-17908791 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 5-183
Cow position: chr27:22423948-22423766 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 34-191
Cow position: chr27:12601483-12601325 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 133

Conread position: 4-162
Cow position: chr28:17565111-17565271 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 40

Conread position: 4-186
Cow position: chr29:24213661-24213476 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 35

Conread position: 1-191
Cow position: chr3:18449468-18449277 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 100

Conread position: 3-173
Cow position: chr3:3585109-3584939 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 18

Conread position: 3-183
Cow position: chr3:31500423-31500602 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 72, 37

Conread position: 3-211
Cow position: chr3:53464529-53464740 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 95, 199

Conread position: 16-188
Cow position: chr3:42433308-42433137 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 23

Conread position: 21-183
Cow position: chr3:12008996-12008838 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 74, 13

Conread position: 1-183
Cow position: chr4:21999749-21999929 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 14

Conread position: 3-188
Cow position: chr4:11642497-11642680 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 18

Conread position: 4-177
Cow position: chr4:58817089-58817262 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 37

Conread position: 4-191
Cow position: chr4:51619314-51619502 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 48

Conread position: 5-192
Cow position: chr4:2213511-2213697 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 34

Conread position: 28-190
Cow position: chr4:44262312-44262475 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 131

Conread position: 22-194
Cow position: chr5:34253948-34253772 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 1-165
Cow position: chr6:20408522-20408359 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 121

Conread position: 3-183
Cow position: chr6:45950770-45950952 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 3-192
Cow position: chr6:2906514-2906331 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 55

Conread position: 4-183
Cow position: chr6:41695373-41695201 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 4-197
Cow position: chr6:52238256-52238060 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 34

Conread position: 5-165
Cow position: chr6:10569058-10569221 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 43-188
Cow position: chr6:31080120-31079973 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 13-182
Cow position: chr7:61674388-61674227 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 50-188
Cow position: chr7:5584120-5584257 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-181
Cow position: chr8:38434836-38434658 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 16

Conread position: 3-170
Cow position: chr8:13865937-13866106 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 3-191
Cow position: chr8:25602164-25602354 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 3-170
Cow position: chr9:44468399-44468563 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 15-165
Cow position: chr9:40446430-40446581 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 121

Conread position: 47-183
Cow position: chr9:22435919-22435782 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 57, 8

Conread position: 1-192
Cow position: chrX:27002976-27002779 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 3-188
Cow position: chrX:3091345-3091529 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 22-173
Cow position: chrX:35452045-35451896 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 149, 78

Conread position: 22-182
Cow position: chrX:22329334-22329489 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 34

Conread position: 46-196
Cow position: chrX:46447619-46447771 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0