Cow genome map

Conread name: Utr1-UTR010075C09

Conread position: 1-131
Cow position: chr10:34982591-34982722 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 1-136
Cow position: chr10:16753563-16753699 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 1-142
Cow position: chr10:411870-411729 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-142
Cow position: chr10:25925361-25925502 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-153
Cow position: chr10:32096402-32096253 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-159
Cow position: chr10:1338968-1338812 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 55

Conread position: 7-140
Cow position: chr10:15364168-15364035 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position: chr11:35101959-35102102 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 41

Conread position: 2-151
Cow position: chr11:63668687-63668834 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 3-142
Cow position: chr11:49608367-49608506 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-138
Cow position: chr13:32704726-32704863 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-142
Cow position: chr13:54724046-54723906 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1-143
Cow position: chr13:44985323-44985465 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-149
Cow position: chr13:30479260-30479402 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 3-142
Cow position: chr13:14022458-14022319 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-138
Cow position: chr13:52416284-52416153 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 22-142
Cow position: chr13:4997619-4997738 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-153
Cow position: chr14:40350282-40350130 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-142
Cow position: chr14:20488107-20487967 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 40

Conread position: 39-152
Cow position: chr14:50166208-50166319 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-146
Cow position: chr15:16923086-16922944 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-150
Cow position: chr15:603515-603366 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-146
Cow position: chr15:13910464-13910320 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 3-153
Cow position: chr15:34401529-34401676 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 1-152
Cow position: chr16:49823083-49823232 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 1-161
Cow position: chr16:29619483-29619638 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 19

Conread position: 1-168
Cow position: chr16:22836289-22836127 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 3-150
Cow position: chr16:7180524-7180670 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-144
Cow position: chr17:37403852-37403995 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-142
Cow position: chr17:3446150-3446013 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 4-135
Cow position: chr17:36608359-36608488 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 1-142
Cow position: chr18:16405035-16404895 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 9-142
Cow position: chr18:42818924-42819057 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-149
Cow position: chr19:915557-915411 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 3-157
Cow position: chr19:39288853-39288699 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-142
Cow position: chr20:18387778-18387640 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 1-152
Cow position: chr20:10993382-10993531 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 55

Conread position: 3-149
Cow position: chr20:31449950-31450096 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-142
Cow position: chr21:44561240-44561381 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-157
Cow position: chr21:22397782-22397934 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-168
Cow position: chr21:32403409-32403572 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 8-142
Cow position: chr21:48469769-48469636 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 87

Conread position: 17-138
Cow position: chr21:42059728-42059849 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-137
Cow position: chr22:4018791-4018655 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-142
Cow position: chr22:12361493-12361362 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 1-144
Cow position: chr23:7747336-7747196 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 1-144
Cow position: chr23:8760672-8760531 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 11

Conread position: 3-142
Cow position: chr23:20948478-20948341 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 1-142
Cow position: chr25:16113745-16113886 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 93

Conread position: 1-142
Cow position: chr25:30065192-30065053 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-150
Cow position: chr26:20858153-20858003 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-142
Cow position: chr28:22806768-22806629 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 1-142
Cow position: chr29:13501455-13501316 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 1-151
Cow position: chr29:19662531-19662381 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 4-184
Cow position: chr29:33648287-33648117 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 1-142
Cow position: chr3:7853965-7854105 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 96

Conread position: 1-149
Cow position: chr3:24413383-24413237 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 1-152
Cow position: chr3:30383306-30383157 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 1-158
Cow position: chr3:5157988-5157834 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 15-149
Cow position: chr3:25262181-25262047 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 165-332
Cow position: chr3:60600420-60600257 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 144, 106

Conread position: 338-666
Cow position: chr3:60600137-60599812 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 47

Conread position: 1-142
Cow position: chr4:5039739-5039599 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 133, 95

Conread position: 1-149
Cow position: chr4:59859323-59859176 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 94

Conread position: 1-140
Cow position: chr5:35334550-35334687 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 1-142
Cow position: chr5:44648251-44648113 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 2-151
Cow position: chr5:43094912-43095058 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 1-150
Cow position: chr6:16440258-16440113 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 2-138
Cow position: chr6:48019327-48019193 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 1-138
Cow position: chr7:11847486-11847351 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1-150
Cow position: chr7:51338005-51337859 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 3-153
Cow position: chr7:52568436-52568584 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 31-142
Cow position: chr7:37080075-37079966 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 1-144
Cow position: chr8:36936865-36936724 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 1-156
Cow position: chr8:17146389-17146541 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 55

Conread position: 3-144
Cow position: chr8:43463961-43463821 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1-131
Cow position: chr9:58397429-58397559 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-142
Cow position: chr9:20709162-20709022 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1-144
Cow position: chr9:56283932-56284076 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1-151
Cow position: chr9:6599229-6599375 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-151
Cow position: chr9:9537249-9537400 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 1-142
Cow position: chrX:25949893-25949752 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-153
Cow position: chrX:25257383-25257525 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 2-150
Cow position: chrX:26592468-26592616 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-132
Cow position: chrX:39266392-39266521 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-134
Cow position: chrX:41754832-41754961 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 3-142
Cow position: chrX:21248297-21248438 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 19-149
Cow position: chrX:1751643-1751770 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0