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Cow genome map

           
Conread name:
           
Utr1-UTR010076A04
        

               
Conread position:
               
160-587
               

               
Cow position:
               
chr1:72119460-72119023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
232-548
               

               
Cow position:
               
chr1:61732527-61732222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
174, 50
               

               
Conread position:
               
232-580
               

               
Cow position:
               
chr1:69059907-69059551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
233-548
               

               
Cow position:
               
chr1:42176902-42177225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 71
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr1:25887661-25888012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
62, 227
               

               
Conread position:
               
236-372
               

               
Cow position:
               
chr1:89478656-89478522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
236-473
               

               
Cow position:
               
chr1:54366309-54366552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
138, 87
               

               
Conread position:
               
236-518
               

               
Cow position:
               
chr1:23050106-23049833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
237-581
               

               
Cow position:
               
chr1:31594422-31594071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
237-725
               

               
Cow position:
               
chr1:29032737-29032236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
147, 70
               

               
Conread position:
               
238-534
               

               
Cow position:
               
chr1:58180289-58180595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
271-473
               

               
Cow position:
               
chr1:84479241-84479035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
310-551
               

               
Cow position:
               
chr1:86362725-86362487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
473-740
               

               
Cow position:
               
chr1:84777386-84777135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
179, 11
               

               
Conread position:
               
232-552
               

               
Cow position:
               
chr10:15862781-15863102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
137, 76
               

               
Conread position:
               
233-527
               

               
Cow position:
               
chr10:38151951-38152239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
236-541
               

               
Cow position:
               
chr10:14886352-14886663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
236-574
               

               
Cow position:
               
chr10:14951214-14950865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
131, 87
               

               
Conread position:
               
236-588
               

               
Cow position:
               
chr10:46190871-46190547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
241-499
               

               
Cow position:
               
chr10:49310028-49309756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
264-581
               

               
Cow position:
               
chr10:3544081-3544393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
546-740
               

               
Cow position:
               
chr10:49308877-49308681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
566-740
               

               
Cow position:
               
chr10:15863662-15863837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
231-579
               

               
Cow position:
               
chr11:49076524-49076867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
236-357
               

               
Cow position:
               
chr11:42428465-42428346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
236-575
               

               
Cow position:
               
chr11:11124591-11124241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
238-454
               

               
Cow position:
               
chr11:81853468-81853701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
577-734
               

               
Cow position:
               
chr11:27282694-27282535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
577-740
               

               
Cow position:
               
chr11:18106549-18106714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
236-569
               

               
Cow position:
               
chr12:19868138-19867816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
154, 87
               

               
Conread position:
               
258-493
               

               
Cow position:
               
chr12:2840195-2840439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
540-734
               

               
Cow position:
               
chr12:22472839-22472640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 136
               

               
Conread position:
               
236-580
               

               
Cow position:
               
chr13:41606690-41606341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
146, 86
               

               
Conread position:
               
543-738
               

               
Cow position:
               
chr13:41606267-41606068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
233-485
               

               
Cow position:
               
chr14:44783183-44783456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
233-578
               

               
Cow position:
               
chr14:44780843-44781205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 274
               

               
Conread position:
               
236-575
               

               
Cow position:
               
chr14:49045922-49045579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 261
               

               
Conread position:
               
236-734
               

               
Cow position:
               
chr14:36184627-36185120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 87
               

               
Conread position:
               
237-527
               

               
Cow position:
               
chr14:14309982-14310279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
239-575
               

               
Cow position:
               
chr14:25439423-25439771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
138, 84
               

               
Conread position:
               
469-740
               

               
Cow position:
               
chr14:12642746-12642471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
483-740
               

               
Cow position:
               
chr14:12640130-12639869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
493-738
               

               
Cow position:
               
chr14:37414683-37414929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
569-740
               

               
Cow position:
               
chr14:33401433-33401258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
233-528
               

               
Cow position:
               
chr15:1236497-1236193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
134, 90
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr15:4630857-4631197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
134, 70
               

               
Conread position:
               
236-459
               

               
Cow position:
               
chr15:21816678-21816913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
236-572
               

               
Cow position:
               
chr15:27064979-27065322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
236-582
               

               
Cow position:
               
chr15:12614142-12613800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
250-448
               

               
Cow position:
               
chr15:1052770-1052578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
174, 58
               

               
Conread position:
               
536-740
               

               
Cow position:
               
chr15:12613459-12613255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 7
               

               
Conread position:
               
236-561
               

               
Cow position:
               
chr16:44964776-44964445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
134, 30
               

               
Conread position:
               
236-581
               

               
Cow position:
               
chr16:334710-334374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 170
               

               
Conread position:
               
236-584
               

               
Cow position:
               
chr16:14422458-14422098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
236-585
               

               
Cow position:
               
chr16:29981994-29981629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
260-581
               

               
Cow position:
               
chr16:52816381-52816695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 63
               

               
Conread position:
               
264-582
               

               
Cow position:
               
chr16:31717265-31717593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
510-734
               

               
Cow position:
               
chr16:52817318-52817547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
555-732
               

               
Cow position:
               
chr16:47779987-47779807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
233-548
               

               
Cow position:
               
chr17:153154-153479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
132, 90
               

               
Conread position:
               
233-550
               

               
Cow position:
               
chr17:4080945-4080628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
141, 90
               

               
Conread position:
               
236-557
               

               
Cow position:
               
chr17:18302463-18302797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
240-581
               

               
Cow position:
               
chr17:31200778-31201125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
233-530
               

               
Cow position:
               
chr18:42072591-42072897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
135, 84
               

               
Conread position:
               
236-367
               

               
Cow position:
               
chr18:45958206-45958075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
555-738
               

               
Cow position:
               
chr18:48547658-48547472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
91, 99
               

               
Conread position:
               
233-459
               

               
Cow position:
               
chr19:6552923-6552687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
134, 90
               

               
Conread position:
               
233-487
               

               
Cow position:
               
chr19:15952788-15952541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
189, 90
               

               
Conread position:
               
236-363
               

               
Cow position:
               
chr19:36476871-36476745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
237-584
               

               
Cow position:
               
chr19:562201-562541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
185, 33
               

               
Conread position:
               
580-740
               

               
Cow position:
               
chr19:36476235-36476073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
233-548
               

               
Cow position:
               
chr2:73190818-73190491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
137, 93
               

               
Conread position:
               
233-563
               

               
Cow position:
               
chr2:3729703-3729382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
190, 6
               

               
Conread position:
               
233-740
               

               
Cow position:
               
chr2:75676902-75677393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
236-517
               

               
Cow position:
               
chr2:20904160-20904446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
236-547
               

               
Cow position:
               
chr2:74392553-74392872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
131, 99
               

               
Conread position:
               
237-368
               

               
Cow position:
               
chr2:63293616-63293745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
260-567
               

               
Cow position:
               
chr2:685615-685318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
369-551
               

               
Cow position:
               
chr2:10294340-10294162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
229-538
               

               
Cow position:
               
chr20:22718186-22718505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
236-456
               

               
Cow position:
               
chr20:35974382-35974615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
237-520
               

               
Cow position:
               
chr20:28475810-28475539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
188, 21
               

               
Conread position:
               
233-526
               

               
Cow position:
               
chr21:20745140-20745431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 91
               

               
Conread position:
               
236-575
               

               
Cow position:
               
chr21:35089280-35088937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 87
               

               
Conread position:
               
236-457
               

               
Cow position:
               
chr22:7276936-7276701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 87
               

               
Conread position:
               
236-558
               

               
Cow position:
               
chr22:36272923-36272592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
128, 87
               

               
Conread position:
               
233-548
               

               
Cow position:
               
chr23:22879748-22880073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
133, 90
               

               
Conread position:
               
236-582
               

               
Cow position:
               
chr23:16617423-16617775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
546-738
               

               
Cow position:
               
chr23:2339429-2339234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
238-487
               

               
Cow position:
               
chr24:38635241-38634982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
245-375
               

               
Cow position:
               
chr24:14283091-14283217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
236-459
               

               
Cow position:
               
chr25:23346239-23346476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
134, 87
               

               
Conread position:
               
245-740
               

               
Cow position:
               
chr25:29357358-29356850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
327-581
               

               
Cow position:
               
chr25:12760462-12760727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 176
               

               
Conread position:
               
376-577
               

               
Cow position:
               
chr25:11267199-11266998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 115
               

               
Conread position:
               
237-527
               

               
Cow position:
               
chr26:16904116-16903821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
104, 86
               

               
Conread position:
               
546-740
               

               
Cow position:
               
chr26:12582867-12583062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr27:25999634-25999968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
175, 90
               

               
Conread position:
               
233-580
               

               
Cow position:
               
chr27:3996965-3997311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 156
               

               
Conread position:
               
233-367
               

               
Cow position:
               
chr28:34648410-34648277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
236-367
               

               
Cow position:
               
chr28:22827516-22827386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
237-449
               

               
Cow position:
               
chr28:22812346-22812126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
237-579
               

               
Cow position:
               
chr28:13721417-13721076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
140, 98
               

               
Conread position:
               
238-367
               

               
Cow position:
               
chr28:8044039-8044167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
555-740
               

               
Cow position:
               
chr28:8335652-8335464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 158
               

               
Conread position:
               
233-367
               

               
Cow position:
               
chr29:30810983-30810854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
233-578
               

               
Cow position:
               
chr29:104009-103683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 75
               

               
Conread position:
               
242-567
               

               
Cow position:
               
chr29:34752255-34752568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
182, 81
               

               
Conread position:
               
250-548
               

               
Cow position:
               
chr29:32640213-32639921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 73
               

               
Conread position:
               
539-740
               

               
Cow position:
               
chr29:13666990-13667193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 116
               

               
Conread position:
               
233-580
               

               
Cow position:
               
chr3:15177661-15177309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
136, 65
               

               
Conread position:
               
236-553
               

               
Cow position:
               
chr3:32843089-32843407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
236-577
               

               
Cow position:
               
chr3:19692742-19693088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
146, 87
               

               
Conread position:
               
237-375
               

               
Cow position:
               
chr3:3979743-3979605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
237-521
               

               
Cow position:
               
chr3:80871080-80870789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
237-535
               

               
Cow position:
               
chr3:52861218-52860909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
239-550
               

               
Cow position:
               
chr3:14755158-14755478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
130, 55
               

               
Conread position:
               
245-574
               

               
Cow position:
               
chr3:18357540-18357875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
369-558
               

               
Cow position:
               
chr3:44256953-44257141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 122
               

               
Conread position:
               
369-579
               

               
Cow position:
               
chr3:21946428-21946638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 123
               

               
Conread position:
               
556-740
               

               
Cow position:
               
chr3:14587118-14586931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 131
               

               
Conread position:
               
559-740
               

               
Cow position:
               
chr3:32817138-32816957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
111, 87
               

               
Conread position:
               
563-740
               

               
Cow position:
               
chr3:40045964-40046144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
91, 84
               

               
Conread position:
               
233-553
               

               
Cow position:
               
chr4:21358818-21358516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
233-572
               

               
Cow position:
               
chr5:58747133-58746804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
195, 70
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr5:27060832-27061169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
233-582
               

               
Cow position:
               
chr5:24151320-24150964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
236-367
               

               
Cow position:
               
chr5:27000444-27000315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
314-574
               

               
Cow position:
               
chr5:25001727-25001997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
561-740
               

               
Cow position:
               
chr5:50159256-50159075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 85
               

               
Conread position:
               
572-740
               

               
Cow position:
               
chr5:27683941-27684113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
233-584
               

               
Cow position:
               
chr6:7180274-7180609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
248-538
               

               
Cow position:
               
chr6:16671630-16671331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
258-556
               

               
Cow position:
               
chr6:42360216-42360519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 50
               

               
Conread position:
               
498-709
               

               
Cow position:
               
chr6:48367216-48367000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
546-731
               

               
Cow position:
               
chr6:6185366-6185178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
556-739
               

               
Cow position:
               
chr6:37476876-37476689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 91
               

               
Conread position:
               
233-579
               

               
Cow position:
               
chr7:39556749-39557106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
233-584
               

               
Cow position:
               
chr7:54886989-54886648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
191, 29
               

               
Conread position:
               
234-576
               

               
Cow position:
               
chr7:58991585-58991231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
236-578
               

               
Cow position:
               
chr7:22680529-22680879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
107, 87
               

               
Conread position:
               
237-530
               

               
Cow position:
               
chr7:49290053-49289749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
133, 89
               

               
Conread position:
               
392-734
               

               
Cow position:
               
chr7:65956188-65956525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
492-740
               

               
Cow position:
               
chr7:20290318-20290566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
556-734
               

               
Cow position:
               
chr7:25249403-25249223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
561-740
               

               
Cow position:
               
chr7:18446031-18446211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
572-741
               

               
Cow position:
               
chr7:55281504-55281676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 97
               

               
Conread position:
               
236-366
               

               
Cow position:
               
chr8:23766686-23766814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
236-367
               

               
Cow position:
               
chr8:25542269-25542140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
237-478
               

               
Cow position:
               
chr8:45693726-45693980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
237-578
               

               
Cow position:
               
chr8:42467057-42466713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
483-740
               

               
Cow position:
               
chr8:32001744-32001998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
556-740
               

               
Cow position:
               
chr8:27367209-27367022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 99
               

               
Conread position:
               
570-740
               

               
Cow position:
               
chr8:42466457-42466284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
233-375
               

               
Cow position:
               
chr9:34107542-34107682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
233-456
               

               
Cow position:
               
chr9:26712976-26713202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
137, 90
               

               
Conread position:
               
233-584
               

               
Cow position:
               
chr9:28002485-28002144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
191, 116
               

               
Conread position:
               
237-531
               

               
Cow position:
               
chr9:3579771-3580079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 111
               

               
Conread position:
               
243-580
               

               
Cow position:
               
chr9:26237431-26237094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
570-740
               

               
Cow position:
               
chr9:28001737-28001565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
232-515
               

               
Cow position:
               
chrX:20699182-20699475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
135, 105
               

               
Conread position:
               
233-572
               

               
Cow position:
               
chrX:22131479-22131809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
208, 90
               

               
Conread position:
               
235-548
               

               
Cow position:
               
chrX:30369758-30370071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
236-521
               

               
Cow position:
               
chrX:19185721-19186018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
134, 86
               

               
Conread position:
               
236-581
               

               
Cow position:
               
chrX:17669186-17669526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
170, 87
               

               
Conread position:
               
472-737
               

               
Cow position:
               
chrX:2141685-2141419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
563-740
               

               
Cow position:
               
chrX:30371479-30371658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 136