Cow genome map

Conread name: Utr1-UTR01F110081

Conread position: 227-632
Cow position: chr10:5640373-5639966 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 274
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 120, 217

Conread position: 234-601
Cow position: chr10:51102865-51103226 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 86

Conread position: 279-599
Cow position: chr10:35476981-35476652 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 58

Conread position: 282-572
Cow position: chr10:49184541-49184246 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 70, 5

Conread position: 287-588
Cow position: chr10:28460606-28460915 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 173

Conread position: 227-573
Cow position: chr11:50023756-50023405 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 80

Conread position: 241-588
Cow position: chr11:8582246-8581888 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 155

Conread position: 281-663
Cow position: chr11:35222475-35222851 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 249
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 30

Conread position: 337-614
Cow position: chr11:81023777-81023505 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 51

Conread position: 425-628
Cow position: chr11:48661736-48661942 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 24, 89

Conread position: 227-671
Cow position: chr12:22213773-22213324 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 253

Conread position: 249-663
Cow position: chr12:7325917-7325497 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 144

Conread position: 290-614
Cow position: chr12:6911349-6911661 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 26

Conread position: 297-613
Cow position: chr12:11053272-11052953 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 12, 29

Conread position: 303-663
Cow position: chr12:17119986-17120331 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 95

Conread position: 330-621
Cow position: chr12:4735356-4735648 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 64

Conread position: 403-672
Cow position: chr12:5586637-5586362 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 99, 80

Conread position: 227-569
Cow position: chr13:6533753-6533405 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 125, 0

Conread position: 227-602
Cow position: chr13:51440446-51440064 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 227-663
Cow position: chr13:38727202-38727650 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 25

Conread position: 252-621
Cow position: chr13:14724772-14725131 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 100, 55

Conread position: 252-663
Cow position: chr13:36075320-36074913 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 286
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 59

Conread position: 281-671
Cow position: chr13:13532806-13533205 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 170

Conread position: 260-572
Cow position: chr14:25656937-25656621 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 21

Conread position: 277-658
Cow position: chr14:33513199-33512822 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 72, 30

Conread position: 229-663
Cow position: chr15:5883699-5884139 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 290
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 22

Conread position: 243-663
Cow position: chr15:40110593-40111023 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 289
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 38

Conread position: 250-614
Cow position: chr15:39360454-39360809 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 20

Conread position: 254-663
Cow position: chr15:46550171-46549764 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 98, 130

Conread position: 276-663
Cow position: chr15:39555246-39554854 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 109

Conread position: 280-632
Cow position: chr15:46099767-46100112 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 72, 143

Conread position: 287-621
Cow position: chr15:19564303-19564647 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 12, 322

Conread position: 404-659
Cow position: chr15:39464493-39464242 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 41

Conread position: 227-632
Cow position: chr16:42637020-42636607 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 282
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 234

Conread position: 323-629
Cow position: chr16:37808341-37808638 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 52

Conread position: 291-585
Cow position: chr17:27788010-27788297 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 61, 16

Conread position: 291-660
Cow position: chr17:12220821-12221200 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 148

Conread position: 227-614
Cow position: chr18:23872972-23873351 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 70, 95

Conread position: 243-609
Cow position: chr19:54844497-54844121 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 241
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 88, 197

Conread position: 279-663
Cow position: chr19:14225593-14225977 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 122

Conread position: 365-588
Cow position: chr19:51611663-51611889 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 84, 64

Conread position: 228-659
Cow position: chr2:39226562-39226994 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 36

Conread position: 289-650
Cow position: chr2:43581808-43582166 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 63, 25

Conread position: 312-628
Cow position: chr2:60854776-60854457 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 7

Conread position: 350-658
Cow position: chr20:6007464-6007153 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 40

Conread position: 382-663
Cow position: chr20:24569404-24569683 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 81

Conread position: 250-583
Cow position: chr21:15276101-15276438 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 11

Conread position: 261-612
Cow position: chr21:8219638-8219991 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 131

Conread position: 324-585
Cow position: chr21:46136617-46136883 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 28, 82

Conread position: 290-588
Cow position: chr22:8268384-8268685 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 180

Conread position: 300-663
Cow position: chr22:9638705-9639070 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 185

Conread position: 227-614
Cow position: chr23:35276121-35276514 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 272

Conread position: 233-584
Cow position: chr23:2188981-2188626 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 31

Conread position: 254-581
Cow position: chr23:28765894-28766217 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 97, 122

Conread position: 325-588
Cow position: chr23:10259950-10259693 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 173

Conread position: 451-663
Cow position: chr23:438262-438048 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 16

Conread position: 279-659
Cow position: chr24:44552638-44553025 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 57

Conread position: 338-659
Cow position: chr24:26713366-26713033 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 14, 260

Conread position: 409-686
Cow position: chr24:39116622-39116333 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 195

Conread position: 229-614
Cow position: chr25:26869845-26870235 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 65, 40

Conread position: 279-672
Cow position: chr25:12449437-12449038 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 147

Conread position: 401-628
Cow position: chr25:40769182-40769407 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 45

Conread position: 227-663
Cow position: chr26:13832276-13831837 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 286

Conread position: 229-702
Cow position: chr26:19640034-19640502 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 307
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 60

Conread position: 246-604
Cow position: chr26:32083457-32083099 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 258

Conread position: 255-612
Cow position: chr26:26063650-26063302 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 43

Conread position: 243-696
Cow position: chr28:9616168-9616618 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 292
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 111, 127

Conread position: 250-632
Cow position: chr28:22134980-22135354 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 201, 57

Conread position: 254-664
Cow position: chr28:676886-676477 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 195

Conread position: 309-659
Cow position: chr28:27679142-27679503 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 288

Conread position: 228-601
Cow position: chr29:39576879-39576511 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 48

Conread position: 233-633
Cow position: chr3:60421772-60422185 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 119, 10

Conread position: 276-572
Cow position: chr3:84363574-84363862 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 9

Conread position: 283-614
Cow position: chr3:25193292-25193611 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 14

Conread position: 331-663
Cow position: chr3:69714789-69715134 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 269

Conread position: 229-669
Cow position: chr4:52951047-52951480 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 290
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 166, 42

Conread position: 231-663
Cow position: chr4:39227751-39228182 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 59

Conread position: 283-613
Cow position: chr4:43070467-43070791 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 166, 53

Conread position: 287-682
Cow position: chr4:36714068-36713672 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 258
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 142

Conread position: 313-659
Cow position: chr4:26630941-26630586 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 16

Conread position: 254-662
Cow position: chr5:42982750-42983143 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 272
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 195, 16

Conread position: 309-666
Cow position: chr5:32023709-32023346 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 43, 176

Conread position: 342-663
Cow position: chr5:34724736-34725061 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 210
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 162

Conread position: 227-614
Cow position: chr7:7514311-7514694 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 16

Conread position: 229-632
Cow position: chr7:14903877-14903473 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 91, 32

Conread position: 233-657
Cow position: chr7:11058579-11058998 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 281
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 119, 77

Conread position: 251-658
Cow position: chr7:7890389-7889976 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 19

Conread position: 252-631
Cow position: chr7:5188710-5188332 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 93, 84

Conread position: 259-663
Cow position: chr7:32829392-32829786 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 196, 42

Conread position: 267-657
Cow position: chr7:13114226-13114609 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 40

Conread position: 290-669
Cow position: chr7:28326176-28325807 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 62, 17

Conread position: 337-584
Cow position: chr7:43013693-43013930 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 41

Conread position: 340-650
Cow position: chr7:8836956-8837266 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 12, 110

Conread position: 260-614
Cow position: chr8:20204622-20204279 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 132

Conread position: 411-663
Cow position: chr8:30030663-30030406 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 92

Conread position: 229-672
Cow position: chr9:19567848-19567401 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 82

Conread position: 278-632
Cow position: chr9:22588958-22588588 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 74, 34

Conread position: 227-738
Cow position: chrX:14316241-14316746 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 10

Conread position: 313-632
Cow position: chrX:26610037-26610363 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 285