Cow genome map
| Conread name: | Utr1-UTR01G010094 |
| Conread position: | 2-504 |
| Cow position: | chr1:52818323-52818809 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 6 |
| Conread position: | 119-685 |
| Cow position: | chr1:71819107-71818532 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 96 |
| Conread position: | 351-569 |
| Cow position: | chr1:20866453-20866233 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 113, 32 |
| Conread position: | 446-643 |
| Cow position: | chr1:37321769-37321557 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 347-504 |
| Cow position: | chr10:53535073-53534924 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 360-654 |
| Cow position: | chr10:46561705-46561426 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 106, 78 |
| Conread position: | 228-503 |
| Cow position: | chr11:2962643-2962897 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 337-504 |
| Cow position: | chr11:13039727-13039570 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 43 |
| Conread position: | 351-504 |
| Cow position: | chr12:8964584-8964731 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 141, 87 |
| Conread position: | 4-693 |
| Cow position: | chr13:46459363-46458685 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 5 |
| Conread position: | 8-665 |
| Cow position: | chr13:14409394-14410055 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 77-694 |
| Cow position: | chr13:37520714-37521324 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 260 |
| Conread position: | 336-628 |
| Cow position: | chr14:12463818-12463527 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 343-692 |
| Cow position: | chr15:6627780-6628121 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 378-643 |
| Cow position: | chr15:35610334-35610085 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 226, 5 |
| Conread position: | 3-693 |
| Cow position: | chr16:46254452-46253765 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 6 |
| Conread position: | 9-529 |
| Cow position: | chr16:43813358-43813873 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 134-685 |
| Cow position: | chr16:19152086-19152622 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 150 |
| Conread position: | 252-507 |
| Cow position: | chr16:15848613-15848376 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 2-643 |
| Cow position: | chr17:4183408-4184036 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 7 |
| Conread position: | 347-504 |
| Cow position: | chr17:36282114-36282264 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 134, 84 |
| Conread position: | 9-674 |
| Cow position: | chr18:1144961-1144315 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 339-497 |
| Cow position: | chr18:19830648-19830799 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 138, 98 |
| Conread position: | 4-471 |
| Cow position: | chr19:6556208-6556673 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 5 |
| Conread position: | 244-640 |
| Cow position: | chr19:10972342-10971974 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 348-505 |
| Cow position: | chr19:10080431-10080579 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 205-654 |
| Cow position: | chr2:38882965-38882532 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 125 |
| Conread position: | 346-693 |
| Cow position: | chr2:39808213-39807860 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 92 |
| Conread position: | 173-685 |
| Cow position: | chr20:40512305-40511796 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 112 |
| Conread position: | 325-649 |
| Cow position: | chr20:22221464-22221142 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 115 |
| Conread position: | 446-662 |
| Cow position: | chr20:38768734-38768518 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 92-490 |
| Cow position: | chr21:1736339-1735951 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 169 |
| Conread position: | 450-602 |
| Cow position: | chr21:30237348-30237205 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 22-504 |
| Cow position: | chr23:28830711-28831164 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 400-656 |
| Cow position: | chr23:38208354-38208602 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 217-545 |
| Cow position: | chr25:5855740-5856062 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 363-636 |
| Cow position: | chr25:2517152-2517412 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 8-691 |
| Cow position: | chr26:18718504-18719175 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 110-510 |
| Cow position: | chr26:15892924-15893312 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 9-492 |
| Cow position: | chr29:43517458-43516976 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 336-685 |
| Cow position: | chr29:12679728-12680076 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 136, 17 |
| Conread position: | 7-504 |
| Cow position: | chr3:51597336-51597821 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 19-716 |
| Cow position: | chr3:1349337-1350025 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 136 |
| Conread position: | 105-679 |
| Cow position: | chr3:29360810-29360250 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 113 |
| Conread position: | 263-656 |
| Cow position: | chr3:36729181-36729556 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 26 |
| Conread position: | 398-685 |
| Cow position: | chr3:57763845-57764123 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 40 |
| Conread position: | 3-668 |
| Cow position: | chr4:58193994-58194640 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 9-469 |
| Cow position: | chr4:51014299-51014752 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 84-685 |
| Cow position: | chr4:20298584-20299185 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 51 |
| Conread position: | 178-684 |
| Cow position: | chr4:66548347-66547856 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 344-666 |
| Cow position: | chr4:26549057-26549352 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 320, 37 |
| Conread position: | 156-657 |
| Cow position: | chr5:68871623-68872111 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 118 |
| Conread position: | 347-662 |
| Cow position: | chr5:46697180-46697493 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 449-685 |
| Cow position: | chr6:38614537-38614775 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 9-685 |
| Cow position: | chr7:20779456-20780114 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 262-688 |
| Cow position: | chr7:42893990-42894411 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 21 |
| Conread position: | 442-626 |
| Cow position: | chr7:33339109-33339304 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 178 |
| Conread position: | 446-685 |
| Cow position: | chr7:600066-600296 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 282-508 |
| Cow position: | chr8:48762981-48763203 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 64, 152 |
| Conread position: | 68-504 |
| Cow position: | chr9:19118325-19118759 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 142-693 |
| Cow position: | chr9:17309920-17310456 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 127 |
| Conread position: | 88-504 |
| Cow position: | chrX:33589527-33589928 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 44 |
| Conread position: | 227-505 |
| Cow position: | chrX:42381902-42381642 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 351-690 |
| Cow position: | chrX:4482580-4482912 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 12 |