Cow genome map
| Conread name: | Utr2-C0001803_N01 |
| Conread position: | 113-506 |
| Cow position: | chr10:58029537-58029942 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 241-506 |
| Cow position: | chr10:17653001-17653258 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 250, 9 |
| Conread position: | 80-506 |
| Cow position: | chr11:34657973-34657537 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 106-441 |
| Cow position: | chr11:8111838-8112194 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 57 |
| Conread position: | 107-490 |
| Cow position: | chr11:74849600-74849191 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 113-488 |
| Cow position: | chr11:15290959-15290569 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 255-479 |
| Cow position: | chr11:41523614-41523839 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 347-506 |
| Cow position: | chr11:55287122-55287286 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 96-506 |
| Cow position: | chr12:14736737-14736318 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 293 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 101-506 |
| Cow position: | chr12:37798022-37797598 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 103-471 |
| Cow position: | chr12:27714065-27714451 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 149, 89 |
| Conread position: | 248-435 |
| Cow position: | chr12:39822039-39822224 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 176-505 |
| Cow position: | chr13:5032084-5031742 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 252-441 |
| Cow position: | chr13:25814885-25814700 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 316-506 |
| Cow position: | chr13:25435010-25434819 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 255-436 |
| Cow position: | chr14:48734456-48734639 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 93, 163 |
| Conread position: | 253-491 |
| Cow position: | chr15:6291039-6290802 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 286-506 |
| Cow position: | chr15:11720421-11720647 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 180 |
| Conread position: | 196-487 |
| Cow position: | chr16:19485445-19485742 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 56, 162 |
| Conread position: | 284-447 |
| Cow position: | chr16:48448267-48448430 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 258-506 |
| Cow position: | chr17:19900466-19900204 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 28, 229 |
| Conread position: | 253-499 |
| Cow position: | chr18:35729298-35729051 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 108 |
| Conread position: | 84-473 |
| Cow position: | chr19:34693393-34692982 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 93-304 |
| Cow position: | chr19:43409816-43409600 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 101-506 |
| Cow position: | chr19:46840672-46841076 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 176-467 |
| Cow position: | chr19:47144951-47144646 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 262-506 |
| Cow position: | chr19:17979768-17979512 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 24, 252 |
| Conread position: | 159-418 |
| Cow position: | chr21:46056200-46055932 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 253-499 |
| Cow position: | chr21:42633644-42633902 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 6, 174 |
| Conread position: | 258-506 |
| Cow position: | chr21:12466353-12466095 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 262-491 |
| Cow position: | chr21:44192966-44193200 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 89 |
| Conread position: | 200-486 |
| Cow position: | chr22:25202388-25202090 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 170 |
| Conread position: | 254-506 |
| Cow position: | chr22:8719714-8719966 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 262-474 |
| Cow position: | chr23:6664874-6664660 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 128-349 |
| Cow position: | chr25:36899726-36899945 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 255-439 |
| Cow position: | chr25:17703699-17703894 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 137 |
| Conread position: | 257-439 |
| Cow position: | chr25:14775350-14775165 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 254-506 |
| Cow position: | chr26:10413607-10413353 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 253-500 |
| Cow position: | chr27:25010146-25010403 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 100, 131 |
| Conread position: | 255-491 |
| Cow position: | chr27:15424020-15424264 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 104, 163 |
| Conread position: | 113-447 |
| Cow position: | chr28:843673-844018 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 126-474 |
| Cow position: | chr28:34663087-34663451 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 262-482 |
| Cow position: | chr28:21855012-21855240 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 86, 157 |
| Conread position: | 43-505 |
| Cow position: | chr7:17984012-17983535 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 18 |
| Conread position: | 80-506 |
| Cow position: | chr7:18353037-18352594 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 113-506 |
| Cow position: | chr7:15814364-15813951 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 167-506 |
| Cow position: | chr7:29438516-29438165 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 242-506 |
| Cow position: | chr7:8646366-8646625 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 253-462 |
| Cow position: | chr7:6500513-6500717 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 253-499 |
| Cow position: | chr7:28149411-28149160 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 241-506 |
| Cow position: | chr8:59061632-59061357 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 75, 66 |
| Conread position: | 313-484 |
| Cow position: | chr8:9917771-9917601 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 253-506 |
| Cow position: | chr9:22482132-22481869 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 255-502 |
| Cow position: | chr9:21229244-21228991 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 315-495 |
| Cow position: | chrX:20976171-20976346 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 174, 87 |