Cow genome map
| Conread name: | Utr2-C0001811_F22 |
| Conread position: | 7-167 |
| Cow position: | chr10:42736038-42735871 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 165 |
| Conread position: | 7-290 |
| Cow position: | chr10:31523378-31523101 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 7-359 |
| Cow position: | chr10:38546715-38547082 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 199 |
| Conread position: | 7-369 |
| Cow position: | chr10:42627977-42627605 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 140 |
| Conread position: | 7-370 |
| Cow position: | chr10:54126975-54126602 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 180 |
| Conread position: | 8-359 |
| Cow position: | chr10:61296808-61296438 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 8-361 |
| Cow position: | chr10:39780340-39780708 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 157, 143 |
| Conread position: | 197-306 |
| Cow position: | chr10:24300079-24300189 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 6-260 |
| Cow position: | chr11:10210818-10211081 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 5 |
| Conread position: | 7-163 |
| Cow position: | chr11:28062821-28062665 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-260 |
| Cow position: | chr11:52462220-52461968 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 159, 129 |
| Conread position: | 7-360 |
| Cow position: | chr11:40779496-40779864 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 73 |
| Conread position: | 7-361 |
| Cow position: | chr11:24677212-24676841 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 12-166 |
| Cow position: | chr11:30126149-30126300 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 166-361 |
| Cow position: | chr11:76375496-76375693 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 10 |
| Conread position: | 178-359 |
| Cow position: | chr11:7686269-7686088 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-163 |
| Cow position: | chr12:2281973-2281819 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 141, 53 |
| Conread position: | 7-361 |
| Cow position: | chr12:22121160-22120792 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 184 |
| Conread position: | 7-368 |
| Cow position: | chr12:32182975-32182629 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 226, 34 |
| Conread position: | 9-174 |
| Cow position: | chr12:8310484-8310317 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 101 |
| Conread position: | 11-246 |
| Cow position: | chr12:15954251-15954498 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 157, 105 |
| Conread position: | 18-368 |
| Cow position: | chr12:21058550-21058907 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 82 |
| Conread position: | 7-370 |
| Cow position: | chr13:34936074-34935685 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 9-273 |
| Cow position: | chr13:20543140-20543415 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 160, 97 |
| Conread position: | 10-370 |
| Cow position: | chr13:34867951-34867596 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 183, 65 |
| Conread position: | 178-360 |
| Cow position: | chr13:54283670-54283490 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 100, 123 |
| Conread position: | 7-260 |
| Cow position: | chr14:13660877-13661125 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 158, 99 |
| Conread position: | 7-359 |
| Cow position: | chr14:50133996-50133642 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 161, 55 |
| Conread position: | 7-368 |
| Cow position: | chr14:45304542-45304918 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 24 |
| Conread position: | 7-369 |
| Cow position: | chr14:40338787-40338407 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 231 |
| Conread position: | 7-370 |
| Cow position: | chr14:46083720-46083346 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 53 |
| Conread position: | 47-370 |
| Cow position: | chr14:45205127-45204795 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 76, 141 |
| Conread position: | 191-370 |
| Cow position: | chr14:35388517-35388697 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 91, 139 |
| Conread position: | 7-143 |
| Cow position: | chr15:4667472-4667336 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 73 |
| Conread position: | 7-160 |
| Cow position: | chr15:6387208-6387361 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 7-166 |
| Cow position: | chr15:4677611-4677452 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-167 |
| Cow position: | chr15:6456381-6456224 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-167 |
| Cow position: | chr15:8673486-8673646 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-167 |
| Cow position: | chr15:35734559-35734398 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 7-292 |
| Cow position: | chr15:17345207-17345508 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 73 |
| Conread position: | 7-354 |
| Cow position: | chr15:53338145-53337807 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 151, 96 |
| Conread position: | 7-361 |
| Cow position: | chr15:24793152-24792786 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 7-361 |
| Cow position: | chr15:32692634-32692266 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 160, 235 |
| Conread position: | 7-369 |
| Cow position: | chr15:370588-370962 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 161, 147 |
| Conread position: | 7-369 |
| Cow position: | chr15:32680469-32680851 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 9-369 |
| Cow position: | chr15:35649115-35649482 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 18-166 |
| Cow position: | chr15:13520784-13520636 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-166 |
| Cow position: | chr15:36641701-36641566 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 166-359 |
| Cow position: | chr15:7932905-7932713 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 166-369 |
| Cow position: | chr15:16591181-16591382 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 195, 10 |
| Conread position: | 201-368 |
| Cow position: | chr15:36641578-36641411 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 162, 36 |
| Conread position: | 7-167 |
| Cow position: | chr16:42740959-42741115 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 7-315 |
| Cow position: | chr16:49257851-49258165 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 228 |
| Conread position: | 9-316 |
| Cow position: | chr16:18688385-18688705 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 136, 87 |
| Conread position: | 9-371 |
| Cow position: | chr16:28233907-28234260 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 156 |
| Conread position: | 11-370 |
| Cow position: | chr16:29031658-29031297 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 91, 26 |
| Conread position: | 18-370 |
| Cow position: | chr16:15369021-15368652 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 304 |
| Conread position: | 128-370 |
| Cow position: | chr16:49956510-49956756 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 176-369 |
| Cow position: | chr16:16687330-16687133 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 176-369 |
| Cow position: | chr16:32934548-32934354 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 177-361 |
| Cow position: | chr16:25152252-25152068 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 93 |
| Conread position: | 177-361 |
| Cow position: | chr16:36233659-36233842 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 228-371 |
| Cow position: | chr16:28158164-28158021 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 135, 39 |
| Conread position: | 100-361 |
| Cow position: | chr17:14327091-14327364 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 161-321 |
| Cow position: | chr17:3694644-3694800 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 186-361 |
| Cow position: | chr17:15416410-15416234 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 111 |
| Conread position: | 229-369 |
| Cow position: | chr17:4080207-4080068 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 134, 110 |
| Conread position: | 7-166 |
| Cow position: | chr18:52424836-52424993 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 7-167 |
| Cow position: | chr18:16660478-16660636 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 7-167 |
| Cow position: | chr18:52444442-52444599 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 8-163 |
| Cow position: | chr18:29236297-29236143 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 11-170 |
| Cow position: | chr18:54172549-54172701 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 178-331 |
| Cow position: | chr18:29236109-29235956 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-166 |
| Cow position: | chr19:24748485-24748325 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 7-167 |
| Cow position: | chr19:27053293-27053458 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 7-260 |
| Cow position: | chr19:378909-379169 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 161, 27 |
| Conread position: | 7-368 |
| Cow position: | chr19:39687549-39687172 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 9-259 |
| Cow position: | chr19:353107-353350 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 10-261 |
| Cow position: | chr19:33952-33709 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 162-369 |
| Cow position: | chr19:27054895-27055102 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 201, 14 |
| Conread position: | 174-359 |
| Cow position: | chr19:32224220-32224404 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-257 |
| Cow position: | chr20:10846811-10847066 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 138, 93 |
| Conread position: | 7-260 |
| Cow position: | chr20:19006109-19006364 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 152 |
| Conread position: | 9-315 |
| Cow position: | chr20:18316096-18316413 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 18-323 |
| Cow position: | chr20:10103065-10103367 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 115 |
| Conread position: | 19-319 |
| Cow position: | chr20:15064229-15063913 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 159-370 |
| Cow position: | chr20:11276965-11277175 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 203, 17 |
| Conread position: | 227-369 |
| Cow position: | chr20:9521597-9521740 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 7-126 |
| Cow position: | chr21:23809380-23809261 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-353 |
| Cow position: | chr21:15585358-15585695 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 7-360 |
| Cow position: | chr21:4590358-4590718 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 154, 92 |
| Conread position: | 8-341 |
| Cow position: | chr21:12056413-12056754 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 8-358 |
| Cow position: | chr21:2542268-2542609 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 111 |
| Conread position: | 47-303 |
| Cow position: | chr21:24299248-24299513 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 161-361 |
| Cow position: | chr21:9891225-9891028 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 161-361 |
| Cow position: | chr21:18820813-18821012 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 170-360 |
| Cow position: | chr21:2415659-2415473 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 176-335 |
| Cow position: | chr21:23809181-23809023 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 176-371 |
| Cow position: | chr21:28873874-28873678 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 7-156 |
| Cow position: | chr22:8136756-8136903 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 7-163 |
| Cow position: | chr22:13712100-13712254 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 7-253 |
| Cow position: | chr22:44609070-44608824 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 68 |
| Conread position: | 7-291 |
| Cow position: | chr22:9464904-9464613 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 161, 24 |
| Conread position: | 7-313 |
| Cow position: | chr22:1321067-1320732 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 36, 300 |
| Conread position: | 7-320 |
| Cow position: | chr22:1294062-1294382 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 138, 91 |
| Conread position: | 7-350 |
| Cow position: | chr22:11030090-11029743 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 163, 68 |
| Conread position: | 7-361 |
| Cow position: | chr22:6087635-6087976 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 255, 21 |
| Conread position: | 7-365 |
| Cow position: | chr22:6504410-6504787 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 7-369 |
| Cow position: | chr22:41420335-41420700 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 147, 284 |
| Conread position: | 8-350 |
| Cow position: | chr22:44370209-44370554 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 157, 117 |
| Conread position: | 9-369 |
| Cow position: | chr22:327740-328118 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 10-361 |
| Cow position: | chr22:1285500-1285847 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 145-352 |
| Cow position: | chr22:8880527-8880324 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 169-359 |
| Cow position: | chr22:17073118-17072929 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 176-354 |
| Cow position: | chr22:3307470-3307649 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 113, 105 |
| Conread position: | 176-361 |
| Cow position: | chr22:45880841-45881023 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 178-371 |
| Cow position: | chr22:1271205-1271397 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 7-156 |
| Cow position: | chr23:5875310-5875459 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 7-260 |
| Cow position: | chr23:810567-810321 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 184, 139 |
| Conread position: | 7-260 |
| Cow position: | chr23:31595731-31595981 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 8-323 |
| Cow position: | chr23:4433883-4433550 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 161-370 |
| Cow position: | chr23:22880447-22880655 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 202, 16 |
| Conread position: | 7-163 |
| Cow position: | chr24:12236576-12236420 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-171 |
| Cow position: | chr24:37216243-37216079 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-266 |
| Cow position: | chr24:12209047-12209309 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 160, 27 |
| Conread position: | 7-302 |
| Cow position: | chr24:16649790-16650097 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 96 |
| Conread position: | 7-302 |
| Cow position: | chr24:36560716-36561025 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 128, 52 |
| Conread position: | 8-257 |
| Cow position: | chr24:12798235-12798483 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 10-163 |
| Cow position: | chr24:6144881-6144728 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-361 |
| Cow position: | chr24:35992048-35992274 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 191-360 |
| Cow position: | chr24:17315178-17315345 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 55 |
| Conread position: | 2-370 |
| Cow position: | chr25:18172806-18172418 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 283 |
| Conread position: | 8-361 |
| Cow position: | chr25:18276362-18276732 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 139, 288 |
| Conread position: | 31-260 |
| Cow position: | chr25:18411783-18412022 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 141, 160 |
| Conread position: | 161-368 |
| Cow position: | chr25:18092205-18092000 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 198, 15 |
| Conread position: | 7-167 |
| Cow position: | chr26:9846639-9846800 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 18-359 |
| Cow position: | chr26:34012508-34012148 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 114, 178 |
| Conread position: | 59-313 |
| Cow position: | chr26:9090200-9089928 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 172-356 |
| Cow position: | chr26:20032320-20032139 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 180-370 |
| Cow position: | chr26:9846833-9847025 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 9-296 |
| Cow position: | chr27:26556549-26556846 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 173 |
| Conread position: | 169-369 |
| Cow position: | chr27:25116551-25116356 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 194, 140 |
| Conread position: | 7-166 |
| Cow position: | chr28:9156930-9157089 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-167 |
| Cow position: | chr28:5796298-5796141 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-288 |
| Cow position: | chr28:21325267-21324971 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 138, 181 |
| Conread position: | 7-311 |
| Cow position: | chr28:8721979-8722294 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 7-359 |
| Cow position: | chr28:24667093-24666737 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 7-361 |
| Cow position: | chr28:21358498-21358126 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 188 |
| Conread position: | 7-362 |
| Cow position: | chr28:10619625-10619994 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 7-370 |
| Cow position: | chr28:2990483-2990863 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 318 |
| Conread position: | 7-371 |
| Cow position: | chr28:5812187-5811805 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 9-360 |
| Cow position: | chr28:1387911-1388253 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 54 |
| Conread position: | 161-361 |
| Cow position: | chr28:26006773-26006574 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 170-357 |
| Cow position: | chr28:7790933-7791122 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 176-338 |
| Cow position: | chr28:17314251-17314089 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 88 |
| Conread position: | 193-371 |
| Cow position: | chr28:7816517-7816339 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 170, 86 |
| Conread position: | 7-166 |
| Cow position: | chr29:21431904-21432060 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 7-368 |
| Cow position: | chr29:2750934-2751311 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 225 |
| Conread position: | 161-361 |
| Cow position: | chr29:103306-103110 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 176-321 |
| Cow position: | chr29:45465100-45465242 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 202-358 |
| Cow position: | chr29:34753019-34753174 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 2-279 |
| Cow position: | chr3:48231557-48231855 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 7 |
| Conread position: | 7-166 |
| Cow position: | chr3:34396664-34396823 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 117, 99 |
| Conread position: | 7-167 |
| Cow position: | chr3:49677117-49676956 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 7-264 |
| Cow position: | chr3:19801786-19801516 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 137, 49 |
| Conread position: | 7-370 |
| Cow position: | chr3:2909715-2910089 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 7-370 |
| Cow position: | chr3:17951032-17950646 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 7-371 |
| Cow position: | chr3:63005796-63006148 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 261, 17 |
| Conread position: | 8-370 |
| Cow position: | chr3:52865391-52865767 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 184 |
| Conread position: | 10-321 |
| Cow position: | chr3:39326063-39325731 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 317 |
| Conread position: | 11-368 |
| Cow position: | chr3:58947057-58946693 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 13-370 |
| Cow position: | chr3:3907576-3907953 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 72 |
| Conread position: | 101-370 |
| Cow position: | chr3:64359049-64359324 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 102-331 |
| Cow position: | chr3:3979523-3979291 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 176-352 |
| Cow position: | chr3:60891317-60891142 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 176-361 |
| Cow position: | chr3:24592970-24593149 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 209-361 |
| Cow position: | chr3:27906283-27906437 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 7-297 |
| Cow position: | chr4:21338816-21339118 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 129, 182 |
| Conread position: | 7-356 |
| Cow position: | chr4:4168656-4168307 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 79, 54 |
| Conread position: | 11-360 |
| Cow position: | chr4:46663365-46663002 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 161-323 |
| Cow position: | chr4:1465088-1465249 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 6-361 |
| Cow position: | chr5:41963663-41964032 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 258 |
| Conread position: | 7-106 |
| Cow position: | chr5:46658967-46658868 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-159 |
| Cow position: | chr5:12682237-12682389 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-166 |
| Cow position: | chr5:32674475-32674630 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 7-361 |
| Cow position: | chr5:41530306-41530671 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 7-370 |
| Cow position: | chr5:61273903-61274286 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 8-295 |
| Cow position: | chr5:28006495-28006192 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 164, 98 |
| Conread position: | 9-361 |
| Cow position: | chr5:23716688-23717017 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 259, 27 |
| Conread position: | 9-370 |
| Cow position: | chr5:49594212-49594576 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 25 |
| Conread position: | 142-370 |
| Cow position: | chr5:46631438-46631662 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 176-338 |
| Cow position: | chr5:29456705-29456542 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 177-370 |
| Cow position: | chr5:27061548-27061743 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 2-348 |
| Cow position: | chr6:12093442-12093801 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 134, 243 |
| Conread position: | 7-189 |
| Cow position: | chr6:11278287-11278462 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 7-302 |
| Cow position: | chr6:47958482-47958205 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 7-331 |
| Cow position: | chr6:38231676-38231335 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 188 |
| Conread position: | 7-362 |
| Cow position: | chr6:6477053-6477406 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 23-369 |
| Cow position: | chr6:22852559-22852924 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 107, 172 |
| Conread position: | 176-354 |
| Cow position: | chr6:4904958-4905137 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 6-358 |
| Cow position: | chr7:21251722-21252088 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 137, 5 |
| Conread position: | 6-361 |
| Cow position: | chr7:67425876-67425508 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 139, 27 |
| Conread position: | 7-162 |
| Cow position: | chr7:26890247-26890092 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-171 |
| Cow position: | chr7:35288127-35288285 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-203 |
| Cow position: | chr7:67416569-67416372 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 161, 100 |
| Conread position: | 7-261 |
| Cow position: | chr7:68779360-68779622 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 172 |
| Conread position: | 7-358 |
| Cow position: | chr7:27536901-27537267 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 102, 262 |
| Conread position: | 7-360 |
| Cow position: | chr7:30156803-30157158 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 85 |
| Conread position: | 7-361 |
| Cow position: | chr7:53990256-53989889 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 335 |
| Conread position: | 7-368 |
| Cow position: | chr7:51013469-51013089 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 114 |
| Conread position: | 11-370 |
| Cow position: | chr7:68858836-68859205 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 118, 74 |
| Conread position: | 24-162 |
| Cow position: | chr7:48632885-48632746 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 32-363 |
| Cow position: | chr7:29371281-29371622 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 113, 292 |
| Conread position: | 161-337 |
| Cow position: | chr7:47049151-47048975 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 176-370 |
| Cow position: | chr7:20431238-20431433 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 157, 149 |
| Conread position: | 191-359 |
| Cow position: | chr7:63020020-63019854 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 207-354 |
| Cow position: | chr7:21242868-21243015 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 142 |
| Conread position: | 7-163 |
| Cow position: | chr8:47884695-47884540 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-167 |
| Cow position: | chr8:9540817-9540969 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 7-167 |
| Cow position: | chr8:33429610-33429450 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-260 |
| Cow position: | chr8:42161967-42162212 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 158, 125 |
| Conread position: | 7-260 |
| Cow position: | chr8:44077333-44077571 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 112 |
| Conread position: | 7-264 |
| Cow position: | chr8:19229486-19229230 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 122, 210 |
| Conread position: | 7-367 |
| Cow position: | chr8:61036206-61036556 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 248, 108 |
| Conread position: | 12-368 |
| Cow position: | chr8:11757390-11757011 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 21-370 |
| Cow position: | chr8:11970895-11971254 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 124, 75 |
| Conread position: | 172-370 |
| Cow position: | chr8:25541475-25541277 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 191, 50 |
| Conread position: | 176-295 |
| Cow position: | chr8:26623134-26623017 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 178-339 |
| Cow position: | chr8:46093345-46093506 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 201-357 |
| Cow position: | chr8:9540956-9541110 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 7-349 |
| Cow position: | chr9:3802850-3802497 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 8-321 |
| Cow position: | chr9:59443164-59442841 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 9-370 |
| Cow position: | chr9:832107-832459 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 26, 95 |
| Conread position: | 17-260 |
| Cow position: | chr9:31020139-31019892 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 173 |
| Conread position: | 29-370 |
| Cow position: | chr9:18002562-18002211 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 203-370 |
| Cow position: | chr9:11321617-11321451 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 7-167 |
| Cow position: | chrX:29283975-29283815 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-360 |
| Cow position: | chrX:25041189-25041558 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 55 |
| Conread position: | 7-360 |
| Cow position: | chrX:28651860-28652223 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 157, 241 |
| Conread position: | 7-361 |
| Cow position: | chrX:31034938-31034573 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 109 |
| Conread position: | 7-369 |
| Cow position: | chrX:31372198-31371829 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 99 |
| Conread position: | 8-316 |
| Cow position: | chrX:16017893-16018207 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 8-341 |
| Cow position: | chrX:37848218-37847879 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 153, 252 |
| Conread position: | 8-361 |
| Cow position: | chrX:21586260-21585888 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 10-355 |
| Cow position: | chrX:28553258-28552896 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 93, 84 |
| Conread position: | 10-369 |
| Cow position: | chrX:2537177-2537547 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 27-370 |
| Cow position: | chrX:21791933-21791566 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 10, 270 |
| Conread position: | 36-354 |
| Cow position: | chrX:35016088-35015752 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 47-171 |
| Cow position: | chrX:22813626-22813502 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-368 |
| Cow position: | chrX:6284048-6284332 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 142-358 |
| Cow position: | chrX:29795014-29795230 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 170-358 |
| Cow position: | chrX:6361704-6361891 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 176-341 |
| Cow position: | chrX:12673774-12673939 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 30 |