Cow genome map
| Conread name: | Utr2-C0001813_J18 |
| Conread position: | 100-332 |
| Cow position: | chr1:72039195-72038953 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 133 |
| Conread position: | 101-242 |
| Cow position: | chr1:42290542-42290684 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 127 |
| Conread position: | 101-352 |
| Cow position: | chr1:40513224-40512960 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 101-352 |
| Cow position: | chr1:42870088-42869831 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 124-285 |
| Cow position: | chr1:89479484-89479654 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 65, 107 |
| Conread position: | 101-286 |
| Cow position: | chr10:24298676-24298484 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 101-360 |
| Cow position: | chr10:38546047-38545777 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 189 |
| Conread position: | 109-288 |
| Cow position: | chr10:8328083-8327895 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 101-351 |
| Cow position: | chr11:8282892-8283158 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 103-290 |
| Cow position: | chr12:18501140-18501330 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 101-352 |
| Cow position: | chr13:20542492-20542227 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 88, 135 |
| Conread position: | 104-287 |
| Cow position: | chr13:54284454-54284643 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 101-287 |
| Cow position: | chr14:12608940-12609135 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 135 |
| Conread position: | 101-287 |
| Cow position: | chr14:22019151-22019343 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 100-324 |
| Cow position: | chr15:21449067-21449290 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 101-352 |
| Cow position: | chr15:36642374-36642637 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 113-352 |
| Cow position: | chr15:35648463-35648214 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 124 |
| Conread position: | 101-287 |
| Cow position: | chr16:9929952-9930147 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 192 |
| Conread position: | 102-360 |
| Cow position: | chr16:29033129-29033403 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 103-287 |
| Cow position: | chr16:32935589-32935778 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 129 |
| Conread position: | 120-352 |
| Cow position: | chr16:16273402-16273155 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 111 |
| Conread position: | 101-325 |
| Cow position: | chr17:14325512-14325301 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 98, 19 |
| Conread position: | 101-285 |
| Cow position: | chr18:16843140-16842949 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 101-295 |
| Cow position: | chr18:48222077-48222280 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 101-324 |
| Cow position: | chr18:2886823-2886601 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 101-360 |
| Cow position: | chr18:56462705-56462435 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 101-288 |
| Cow position: | chr19:42648910-42648718 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 17, 134 |
| Conread position: | 102-352 |
| Cow position: | chr19:32223244-32222979 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 100-287 |
| Cow position: | chr2:14822144-14822342 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 179 |
| Conread position: | 100-352 |
| Cow position: | chr2:1673024-1672761 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 101-352 |
| Cow position: | chr2:15577917-15577660 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 151, 87 |
| Conread position: | 102-286 |
| Cow position: | chr2:51305085-51304901 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 102-359 |
| Cow position: | chr2:36031089-36030823 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 101-240 |
| Cow position: | chr21:13123728-13123583 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 101-360 |
| Cow position: | chr21:30226297-30226566 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 101-287 |
| Cow position: | chr22:6503572-6503376 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 101-352 |
| Cow position: | chr22:13917608-13917876 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 101-352 |
| Cow position: | chr22:41419589-41419330 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 137 |
| Conread position: | 102-360 |
| Cow position: | chr22:23853437-23853710 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 60 |
| Conread position: | 103-352 |
| Cow position: | chr22:1270425-1270177 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 100-287 |
| Cow position: | chr23:38578381-38578575 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 102-351 |
| Cow position: | chr23:1327368-1327102 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 101-286 |
| Cow position: | chr24:36559896-36559700 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 101-276 |
| Cow position: | chr25:36240703-36240876 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 101-242 |
| Cow position: | chr26:12574241-12574094 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 101-324 |
| Cow position: | chr26:9849757-9849536 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 101-324 |
| Cow position: | chr26:9853268-9853047 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 99-241 |
| Cow position: | chr27:16439431-16439579 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 101-276 |
| Cow position: | chr27:26555899-26555714 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 124 |
| Conread position: | 101-352 |
| Cow position: | chr28:10071134-10071396 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 101-360 |
| Cow position: | chr28:5812841-5813109 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 133 |
| Conread position: | 101-287 |
| Cow position: | chr29:104682-104870 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 100-287 |
| Cow position: | chr3:14754265-14754070 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 101-287 |
| Cow position: | chr3:24591589-24591404 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 101-288 |
| Cow position: | chr3:14632665-14632469 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 101-352 |
| Cow position: | chr3:29595227-29595492 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 103-360 |
| Cow position: | chr3:52864431-52864161 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 127 |
| Conread position: | 101-295 |
| Cow position: | chr4:66179150-66178948 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 101-352 |
| Cow position: | chr4:21338165-21337902 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 111-360 |
| Cow position: | chr4:34185030-34184787 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 9 |
| Conread position: | 101-267 |
| Cow position: | chr5:32945806-32945977 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 101-356 |
| Cow position: | chr5:49593523-49593251 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 100-293 |
| Cow position: | chr6:65928009-65928209 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 102-287 |
| Cow position: | chr6:35420529-35420341 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 104-279 |
| Cow position: | chr6:43608281-43608098 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 129 |
| Conread position: | 101-280 |
| Cow position: | chr7:1400196-1400010 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 133 |
| Conread position: | 101-352 |
| Cow position: | chr7:53990916-53991173 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 101-359 |
| Cow position: | chr7:29470287-29470557 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 84, 19 |
| Conread position: | 102-275 |
| Cow position: | chr7:68857949-68857764 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 16, 132 |
| Conread position: | 110-359 |
| Cow position: | chr7:51014125-51014377 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 100-295 |
| Cow position: | chr8:51667946-51667740 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 101-286 |
| Cow position: | chr8:47672822-47673018 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 101-320 |
| Cow position: | chr8:25542853-25543070 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 101-352 |
| Cow position: | chr8:11970240-11969981 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 101-360 |
| Cow position: | chr8:38607173-38606901 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 101-287 |
| Cow position: | chr9:44817862-44818059 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 136 |
| Conread position: | 102-360 |
| Cow position: | chr9:13477215-13476943 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 101-285 |
| Cow position: | chrX:34988807-34989001 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 101-287 |
| Cow position: | chrX:28549774-28549969 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 101-360 |
| Cow position: | chrX:2536871-2536614 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 114-360 |
| Cow position: | chrX:21587114-21587380 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 118 |