Cow genome map
| Conread name: | mA2-MI-P-A2-aar-c-06-1-UM.s1 |
| Conread position: | 23-212 |
| Cow position: | chr1:160809-160994 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 158, 29 |
| Conread position: | 209-337 |
| Cow position: | chr1:8906742-8906620 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 238-344 |
| Cow position: | chr1:161236-161343 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 277-352 |
| Cow position: | chr1:47480032-47479959 (view UCSC Genome Browser custom track) |
| Alignm length: | 76 |
| Alignm identity: | 72 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-279 |
| Cow position: | chr10:14622855-14622577 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 232 |
| Conread position: | 194-351 |
| Cow position: | chr10:40314915-40314762 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-341 |
| Cow position: | chr11:67284310-67283971 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 238 |
| Conread position: | 25-350 |
| Cow position: | chr11:19728276-19728604 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 60-272 |
| Cow position: | chr12:30842624-30842835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 24-344 |
| Cow position: | chr15:2109271-2109591 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 23-352 |
| Cow position: | chr19:42922972-42922642 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 93 |
| Conread position: | 52-188 |
| Cow position: | chr19:15558896-15559026 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-349 |
| Cow position: | chr2:1241781-1242121 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 140 |
| Conread position: | 1-252 |
| Cow position: | chr22:35737313-35737564 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-342 |
| Cow position: | chr22:45621442-45621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 185 |
| Conread position: | 220-341 |
| Cow position: | chr22:35737557-35737675 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 117 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 107-343 |
| Cow position: | chr23:5423183-5422949 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 57-347 |
| Cow position: | chr24:15448900-15448614 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 124-350 |
| Cow position: | chr24:32145170-32145394 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 115 |
| Conread position: | 1-347 |
| Cow position: | chr27:14706690-14706354 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 116 |
| Conread position: | 3-345 |
| Cow position: | chr27:30549973-30550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 34 |
| Conread position: | 217-328 |
| Cow position: | chr28:13881686-13881575 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 2-341 |
| Cow position: | chr3:17723231-17723568 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 28 |
| Conread position: | 4-275 |
| Cow position: | chr3:2886010-2886299 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 148 |
| Conread position: | 57-319 |
| Cow position: | chr4:46919302-46919553 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-349 |
| Cow position: | chr5:62311044-62311380 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 23-349 |
| Cow position: | chr5:61090828-61090500 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 69 |
| Conread position: | 115-352 |
| Cow position: | chr5:2002976-2003196 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 196-350 |
| Cow position: | chr6:55004366-55004216 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 137 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-341 |
| Cow position: | chr7:63142595-63142257 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 90 |
| Conread position: | 1-352 |
| Cow position: | chr7:65486548-65486197 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 1-352 |
| Cow position: | chr9:24247414-24247062 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 241 |