Cow genome map
| Conread name: | mCP1-MI-P-CP1-nza-e-21-0-UI.s1 |
| Conread position: | 436-684 |
| Cow position: | chr1:7837578-7837337 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 438-684 |
| Cow position: | chr1:30034803-30035038 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 436-688 |
| Cow position: | chr10:16647110-16646861 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 438-684 |
| Cow position: | chr10:35353869-35353626 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 99 |
| Conread position: | 438-622 |
| Cow position: | chr11:29616458-29616282 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 133, 53 |
| Conread position: | 435-583 |
| Cow position: | chr12:4800958-4800809 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 134, 129 |
| Conread position: | 436-687 |
| Cow position: | chr13:34190159-34190410 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 110 |
| Conread position: | 418-688 |
| Cow position: | chr15:609352-609075 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 438-688 |
| Cow position: | chr15:21533349-21533096 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 436-666 |
| Cow position: | chr16:54322980-54322752 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 438-688 |
| Cow position: | chr17:11032151-11032402 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 135, 175 |
| Conread position: | 436-684 |
| Cow position: | chr2:51479840-51480089 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 236 |
| Conread position: | 438-681 |
| Cow position: | chr2:28655269-28655513 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 109 |
| Conread position: | 438-683 |
| Cow position: | chr2:20917498-20917262 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 438-683 |
| Cow position: | chr2:31488044-31488295 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 89, 209 |
| Conread position: | 438-688 |
| Cow position: | chr2:9688628-9688376 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 102 |
| Conread position: | 436-684 |
| Cow position: | chr22:24817634-24817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 436-666 |
| Cow position: | chr23:11343617-11343850 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 436-684 |
| Cow position: | chr26:21350671-21350917 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 52, 129 |
| Conread position: | 436-688 |
| Cow position: | chr27:1536291-1536545 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 110 |
| Conread position: | 431-688 |
| Cow position: | chr28:25826956-25826697 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 134, 163 |
| Conread position: | 436-684 |
| Cow position: | chr29:32800414-32800656 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 436-688 |
| Cow position: | chr29:29506236-29505984 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 76, 90 |
| Conread position: | 436-685 |
| Cow position: | chr3:74848112-74847874 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 435-684 |
| Cow position: | chr4:23552565-23552803 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 109, 115 |
| Conread position: | 436-688 |
| Cow position: | chr4:27293033-27292782 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 201 |
| Conread position: | 436-687 |
| Cow position: | chr5:46671567-46671815 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 436-688 |
| Cow position: | chr5:46685658-46685411 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 127, 116 |
| Conread position: | 436-666 |
| Cow position: | chr7:16934491-16934724 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 431-684 |
| Cow position: | chr8:1598341-1598096 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 129, 101 |
| Conread position: | 441-684 |
| Cow position: | chr8:49600944-49600702 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 75, 51 |
| Conread position: | 436-688 |
| Cow position: | chr9:12285682-12285428 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 76 |
| Conread position: | 436-688 |
| Cow position: | chrX:2299828-2300070 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 134, 69 |
| Conread position: | 438-688 |
| Cow position: | chrX:40693797-40693541 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 133, 166 |