Cow genome map
| Conread name: | mE3-MI-P-E3-agr-c-12-1-UM.s1 |
| Conread position: | 4-298 |
| Cow position: | chr1:8907260-8906980 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 285, 156 |
| Conread position: | 7-186 |
| Cow position: | chr1:53020822-53020645 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 172, 146 |
| Conread position: | 15-335 |
| Cow position: | chr1:160689-160994 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 24 |
| Conread position: | 332-464 |
| Cow position: | chr1:8906742-8906616 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 361-467 |
| Cow position: | chr1:161236-161343 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 400-476 |
| Cow position: | chr1:47480032-47479958 (view UCSC Genome Browser custom track) |
| Alignm length: | 77 |
| Alignm identity: | 74 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-402 |
| Cow position: | chr10:14622977-14622577 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 317-477 |
| Cow position: | chr10:40314915-40314759 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-464 |
| Cow position: | chr11:67284429-67283971 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 83 |
| Conread position: | 139-473 |
| Cow position: | chr11:19728267-19728604 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 183-395 |
| Cow position: | chr12:30842624-30842835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 59-467 |
| Cow position: | chr15:2109183-2109591 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 113 |
| Conread position: | 1-118 |
| Cow position: | chr18:1650694-1650577 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-311 |
| Cow position: | chr19:15558741-15559026 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 128-477 |
| Cow position: | chr19:42922990-42922640 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 111 |
| Conread position: | 50-472 |
| Cow position: | chr2:1241707-1242121 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 214 |
| Conread position: | 1-375 |
| Cow position: | chr22:35737190-35737564 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-465 |
| Cow position: | chr22:45621442-45621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 184 |
| Conread position: | 343-464 |
| Cow position: | chr22:35737557-35737675 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 118 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 230-466 |
| Cow position: | chr23:5423183-5422949 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 176-470 |
| Cow position: | chr24:15448904-15448614 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 247-476 |
| Cow position: | chr24:32145170-32145397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 1-468 |
| Cow position: | chr27:30549848-30550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 161 |
| Conread position: | 1-470 |
| Cow position: | chr27:14706806-14706354 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 28 |
| Conread position: | 340-451 |
| Cow position: | chr28:13881686-13881575 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 1-398 |
| Cow position: | chr3:2885886-2886299 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 76 |
| Conread position: | 1-464 |
| Cow position: | chr3:17723107-17723568 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 445, 152 |
| Conread position: | 46-392 |
| Cow position: | chr3:54640533-54640192 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 114, 139 |
| Conread position: | 179-442 |
| Cow position: | chr4:46919301-46919553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-472 |
| Cow position: | chr5:62310925-62311380 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-476 |
| Cow position: | chr5:2002757-2003197 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 59-472 |
| Cow position: | chr5:61090913-61090500 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 319-473 |
| Cow position: | chr6:55004366-55004216 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 138 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-82 |
| Cow position: | chr7:63517254-63517173 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 74 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-464 |
| Cow position: | chr7:63142718-63142257 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 213 |
| Conread position: | 1-477 |
| Cow position: | chr7:65486671-65486195 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 290 |
| Conread position: | 1-476 |
| Cow position: | chr9:24247537-24247061 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 364 |