Cow genome map
| Conread name: | mE7-MI-P-E7-agj-a-10-1-UM.s1 |
| Conread position: | 1-348 |
| Cow position: | chr1:8907314-8906980 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 212 |
| Conread position: | 8-236 |
| Cow position: | chr1:53020872-53020645 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 132, 196 |
| Conread position: | 66-385 |
| Cow position: | chr1:160689-160994 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 382-514 |
| Cow position: | chr1:8906742-8906616 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 411-517 |
| Cow position: | chr1:161236-161343 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 450-526 |
| Cow position: | chr1:47480032-47479958 (view UCSC Genome Browser custom track) |
| Alignm length: | 77 |
| Alignm identity: | 74 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 5-452 |
| Cow position: | chr10:14623023-14622577 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 20 |
| Conread position: | 367-527 |
| Cow position: | chr10:40314915-40314759 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-514 |
| Cow position: | chr11:67284480-67283971 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 134 |
| Conread position: | 189-523 |
| Cow position: | chr11:19728267-19728604 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 233-445 |
| Cow position: | chr12:30842624-30842835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 110-517 |
| Cow position: | chr15:2109183-2109591 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 1-168 |
| Cow position: | chr18:1650745-1650577 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 5-361 |
| Cow position: | chr19:15558684-15559026 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 216 |
| Conread position: | 178-527 |
| Cow position: | chr19:42922990-42922640 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 111 |
| Conread position: | 101-522 |
| Cow position: | chr2:1241707-1242121 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 214 |
| Conread position: | 1-425 |
| Cow position: | chr22:35737139-35737564 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 238-515 |
| Cow position: | chr22:45621442-45621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 184 |
| Conread position: | 393-514 |
| Cow position: | chr22:35737557-35737675 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 118 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 280-516 |
| Cow position: | chr23:5423183-5422949 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 226-520 |
| Cow position: | chr24:15448904-15448614 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 297-526 |
| Cow position: | chr24:32145170-32145397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 3-518 |
| Cow position: | chr27:30549799-30550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 208 |
| Conread position: | 48-520 |
| Cow position: | chr27:14706810-14706354 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 390-501 |
| Cow position: | chr28:13881686-13881575 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 1-448 |
| Cow position: | chr3:2885835-2886299 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 127 |
| Conread position: | 1-514 |
| Cow position: | chr3:17723056-17723568 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 203 |
| Conread position: | 97-442 |
| Cow position: | chr3:54640533-54640192 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 229-492 |
| Cow position: | chr4:46919301-46919553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-115 |
| Cow position: | chr5:25252802-25252916 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-522 |
| Cow position: | chr5:62310874-62311380 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 87 |
| Conread position: | 1-526 |
| Cow position: | chr5:2002706-2003197 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 220 |
| Conread position: | 110-522 |
| Cow position: | chr5:61090913-61090500 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 369-523 |
| Cow position: | chr6:55004366-55004216 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 138 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-133 |
| Cow position: | chr7:63517305-63517173 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-514 |
| Cow position: | chr7:63142769-63142257 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 264 |
| Conread position: | 1-527 |
| Cow position: | chr7:65486722-65486195 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 341 |
| Conread position: | 1-526 |
| Cow position: | chr9:24247588-24247061 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 415 |