Cow genome map
| Conread name: | mE7-MI-P-E7-agm-e-10-1-UM.s1 |
| Conread position: | 2-463 |
| Cow position: | chr1:8907421-8906980 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 452, 29 |
| Conread position: | 36-351 |
| Cow position: | chr1:53020957-53020645 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 308, 86 |
| Conread position: | 180-500 |
| Cow position: | chr1:160689-160994 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 24 |
| Conread position: | 497-629 |
| Cow position: | chr1:8906742-8906616 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 526-632 |
| Cow position: | chr1:161236-161343 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 565-641 |
| Cow position: | chr1:47480032-47479958 (view UCSC Genome Browser custom track) |
| Alignm length: | 77 |
| Alignm identity: | 74 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-567 |
| Cow position: | chr10:14623132-14622577 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 41 |
| Conread position: | 482-642 |
| Cow position: | chr10:40314915-40314759 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 2-629 |
| Cow position: | chr11:67284592-67283971 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 493, 42 |
| Conread position: | 304-638 |
| Cow position: | chr11:19728267-19728604 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 348-560 |
| Cow position: | chr12:30842624-30842835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 1-212 |
| Cow position: | chr13:35473458-35473668 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 51-208 |
| Cow position: | chr15:2142169-2142010 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 224-632 |
| Cow position: | chr15:2109183-2109591 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 113 |
| Conread position: | 2-283 |
| Cow position: | chr18:1650858-1650577 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 2-476 |
| Cow position: | chr19:15558574-15559026 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 43 |
| Conread position: | 293-642 |
| Cow position: | chr19:42922990-42922640 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 111 |
| Conread position: | 216-637 |
| Cow position: | chr2:1241708-1242121 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 213 |
| Conread position: | 2-540 |
| Cow position: | chr22:35737027-35737564 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 353-630 |
| Cow position: | chr22:45621442-45621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 184 |
| Conread position: | 508-629 |
| Cow position: | chr22:35737557-35737675 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 118 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 395-631 |
| Cow position: | chr23:5423183-5422949 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 341-635 |
| Cow position: | chr24:15448904-15448614 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 412-641 |
| Cow position: | chr24:32145170-32145397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 16-633 |
| Cow position: | chr27:30549700-30550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 497, 20 |
| Conread position: | 162-635 |
| Cow position: | chr27:14706810-14706354 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 32 |
| Conread position: | 505-616 |
| Cow position: | chr28:13881686-13881575 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 2-563 |
| Cow position: | chr3:2885723-2886299 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 42 |
| Conread position: | 2-629 |
| Cow position: | chr3:17722944-17723568 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 609, 42 |
| Conread position: | 222-557 |
| Cow position: | chr3:54640522-54640192 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 108, 128 |
| Conread position: | 344-607 |
| Cow position: | chr4:46919301-46919553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 2-229 |
| Cow position: | chr5:25252690-25252916 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 29-641 |
| Cow position: | chr5:2002635-2003197 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 15 |
| Conread position: | 107-637 |
| Cow position: | chr5:62310867-62311380 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 224-637 |
| Cow position: | chr5:61090913-61090500 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 484-638 |
| Cow position: | chr6:55004366-55004216 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 138 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 2-247 |
| Cow position: | chr7:63517416-63517173 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-629 |
| Cow position: | chr7:63142880-63142257 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 42 |
| Conread position: | 2-642 |
| Cow position: | chr7:65486833-65486195 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 42 |
| Conread position: | 2-641 |
| Cow position: | chr9:24247700-24247061 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 493, 42 |