Cow genome map
| Conread name: | mE7-MI-P-E7-ago-e-03-1-UM.s1 |
| Conread position: | 2-273 |
| Cow position: | chr1:53020913-53020645 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 264, 42 |
| Conread position: | 4-385 |
| Cow position: | chr1:8907347-8906980 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 245 |
| Conread position: | 104-422 |
| Cow position: | chr1:160691-160994 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 22 |
| Conread position: | 371-551 |
| Cow position: | chr1:8906808-8906616 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 448-554 |
| Cow position: | chr1:161236-161343 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 487-563 |
| Cow position: | chr1:47480032-47479958 (view UCSC Genome Browser custom track) |
| Alignm length: | 77 |
| Alignm identity: | 74 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 5-489 |
| Cow position: | chr10:14623058-14622577 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 36 |
| Conread position: | 404-564 |
| Cow position: | chr10:40314915-40314759 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-551 |
| Cow position: | chr11:67284516-67283971 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 416, 170 |
| Conread position: | 226-560 |
| Cow position: | chr11:19728267-19728604 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 270-482 |
| Cow position: | chr12:30842624-30842835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 1-139 |
| Cow position: | chr13:35473535-35473673 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-554 |
| Cow position: | chr15:2109183-2109591 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 113 |
| Conread position: | 1-205 |
| Cow position: | chr18:1650781-1650577 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-398 |
| Cow position: | chr19:15558652-15559026 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 248 |
| Conread position: | 215-564 |
| Cow position: | chr19:42922990-42922640 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 111 |
| Conread position: | 137-559 |
| Cow position: | chr2:1241707-1242121 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 214 |
| Conread position: | 1-462 |
| Cow position: | chr22:35737103-35737564 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 275-552 |
| Cow position: | chr22:45621442-45621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 184 |
| Conread position: | 430-551 |
| Cow position: | chr22:35737557-35737675 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 117 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 317-553 |
| Cow position: | chr23:5423183-5422949 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 263-557 |
| Cow position: | chr24:15448904-15448614 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 334-563 |
| Cow position: | chr24:32145170-32145397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 3-555 |
| Cow position: | chr27:30549763-30550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 432, 244 |
| Conread position: | 84-557 |
| Cow position: | chr27:14706810-14706354 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 32 |
| Conread position: | 427-538 |
| Cow position: | chr28:13881686-13881575 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 1-485 |
| Cow position: | chr3:2885798-2886299 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 164 |
| Conread position: | 1-551 |
| Cow position: | chr3:17723020-17723568 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 532, 239 |
| Conread position: | 133-479 |
| Cow position: | chr3:54640533-54640192 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 139 |
| Conread position: | 266-529 |
| Cow position: | chr4:46919301-46919553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 3-149 |
| Cow position: | chr5:25252768-25252914 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 131 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-563 |
| Cow position: | chr5:2002688-2003197 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 238 |
| Conread position: | 29-559 |
| Cow position: | chr5:62310867-62311380 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 146-559 |
| Cow position: | chr5:61090913-61090500 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 406-560 |
| Cow position: | chr6:55004366-55004216 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 137 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-169 |
| Cow position: | chr7:63517340-63517173 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-551 |
| Cow position: | chr7:63142804-63142257 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 26 |
| Conread position: | 1-564 |
| Cow position: | chr7:65486757-65486195 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 26 |
| Conread position: | 1-563 |
| Cow position: | chr9:24247624-24247061 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 416, 451 |